Phaseolus vulgaris (common bean): PHAVU_002G104500g Help Entry PHAVU_002G104500g CDS       T03093                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism pvu  Phaseolus vulgaris (common bean) Pathway pvu03020   RNA polymerase pvu03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:pvu00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     PHAVU_002G104500g   09124 Replication and repair    03420 Nucleotide excision repair     PHAVU_002G104500g  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pvu03021]     PHAVU_002G104500g    03400 DNA repair and recombination proteins [BR:pvu03400]     PHAVU_002G104500g Enzymes [BR:pvu01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      PHAVU_002G104500g Transcription machinery [BR:pvu03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      PHAVU_002G104500g DNA repair and recombination proteins [BR:pvu03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       PHAVU_002G104500g BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R MIF4G_like_2 DUF5938 DUF719 Motif Other DBs NCBI-GeneID:  18637550 NCBI-ProteinID:  XP_007157862 UniProt:  V7CLS7 LinkDB All DBs Position 2:complement(21060748..21069252) Genome browser AA seq 1834 aa AA seqDB search MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITI EGMKIIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT LLGCRKITKRDTFISKDVFMNTLMWWEDFDGKVPTPTILKPEPLWTGKQVFNLIIPKPIN LIRYSSWHSESERGSITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISAAKEKVKQLIRDAQEKKL EAEPGRTMMDSFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK LDSLKMKKTEFDRVFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLEADRYQ LATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLRVVP GEDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASG EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLN PDVGKTKERAKSVQCALEYTTLRSVTQATEVWYDPEPMSTIIDEDVDFVKSYYEMPDEEV ALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM NDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIPDINKVFIKNTKVQKFDESEGFKP NEEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDG SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH LRGVTENIMLGQLAPIGTGECALYLNDEMLKNAIELQLPSYMDGLDFGMTPARSPISGTP YHEGLMSPSYLLSPNLRLSPTSDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY SPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTS PSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPTYSPTSPSYNLQSAKYSPSLAYSP SSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPTSPTYSPSSPYNSGVSPDYSPSSPPF SPSTGYSPSQPGYSPSSTSQYTPQTSDKDDRATR NT seq 5505 nt NT seq  +upstreamnt  +downstreamnt atggatattcgatttccgttctctccggcggaggtcgccaaagtccgcatggttcagttt ggaatactcagtcccgatgagatcaggcaaatgtctgtggtgcaaattgagcatggtgag acgacggagagagggaagcccaaggttgcaggattgagtgaccctcgacttggaactatt gacagaaaactcaagtgtgagacttgcacggcgagtatggctgaatgtcctggccatttt ggtcacttggagcttgccaagccaatgtttcacattgggtttttgaagacagtgttgact ataatgcgttgtgtttgcttcaactgctctaaaattctagctgacgagaatgatcacaaa tttaagcaagctttaagaatcaggaatcccaagaacaggctgaaaaagattctggatgct tgcaaaaacaaaagcaagtgtgaagggggagatgagattgatattcctggacaagatact gatgagccagttaaaaagagtcgtggtggctgtggtgctcagcaaccgaagattacgatt gaagggatgaaaattattgcagagtacaaagctcaaagaaagaaaagtgatgaccaagaa cagcttcctgaacctgtagagaggaaacaaactctttctgcagaaagggttcttggtgtt ctgaaaaggataagcgacgaggactgtcagttgctgggcttgaatcctaagtatgcccgc cctgattggatgattttacaagttcttccaattcctcctccacctgtgagaccttctgta atgatggacacatcctccaggagtgaggatgatttgactcatcagctggccatgatcatc aggcacaatgagaatcttaagagacaggagaggaacgggtctcctgcacatattatttct gagtttgctcagctattgcagttccacatagcaacatattttgataatgagttgcctgga ctgccaagggctactcaaagatccggaaggcctatcaaatcaatatgtagcaggctcaag gcaaaagaaggacggattagaggtaacttgatgggtaaaagagtcgatttttctgctcga acagtcattacacctgatccaacaatcaacattgatcaattgggagtaccatggagtatt gcgttgaatctaacatacccagagaccgtgactccatacaacattgaaaggttgaaggaa cttgttgagtacggacctcatcctccacctggaaaaactggtgccaagtacatcattcgt gatgatgggcaaaggcttgatctcagatatttaaagaaaagtagtgatcaccatttggag cttggctacaaggttgagcgtcatttgaatgatggagactttgttctcttcaatcgtcag cctagtcttcataaaatgtccatcatggggcatagaatcaaaatcatgccatattctaca ttccggcttaacttgtctgtaacttcaccatataatgctgattttgatggggatgaaatg aatatgcatgttcctcagtcttttgaaactagagctgaggttttggagctgatgatggtg cctaaatgcattgtgtcaccacagtcaaacaggccagtgatgggaattgtccaagataca cttttaggatgcagaaaaatcaccaagagagatacttttatctcaaaggatgtttttatg aacacactgatgtggtgggaagattttgatgggaaagttcctactcctacaatattgaag ccagaaccattgtggacagggaaacaagttttcaatctcatcattcctaagcctataaat ctaattagatactctagttggcacagtgagagtgaaaggggatccataacccctggggat accatggtgagaattgaaaaaggtgaactacttactggaacactttgcaaaaagacactt ggaacatctaccggaagtctcatccacgtcatttgggaagaggttggccctgatgcagct cggaaatttcttggtcatactcagtggcttgtaaactactggcttttgcaaaatgctttt agcattggaattggtgatacaattgctgatgcttccactatggaaaccataaatcagact atatcagcagctaaggagaaagtgaaacaacttatcagggatgctcaagagaaaaagttg gaggctgagcctggtcggacaatgatggattcatttgaaaacagagtgaatcagactcta aatagagctcgtgatgatgctggaaatagtgctcagaaaagtttatctgagagcaacaat ctgaaagcaatggtgacggctggatccaaaggaagttttatcaacatatctcaaatgact gcttgtgtgggccaacagaacgttgagggtaaacgaattccatatgggttcatcgacagg acattgcctcacttcacaaaagatgattatgggcctgaaagtcgtggctttgtggaaaac tcatatctgcgtggactgacacctcaagaattcttttttcatgccatgggtggtagggaa ggtcttattgatactgccgtgaagacctctgaaactgggtacatccaaaggcgactggtg aaggctatggaagacatcatggttaaatatgatgggacagttagaaattctttgggagac gtcatacagtttctttatggggaagatggtatggacgccgtttggattgaaacacagaag ctagattcccttaaaatgaaaaagacagaatttgatagggtgtttaggtatgaatttgat gatgaaaactggaagcctacctacatgcttgaagagccggtagaagacttaaaaaccatc agagaatttcgaaatgtgtttgaagctgaggtccagaaacttgaagctgatagatatcaa cttgcaactgagatagccactactggtgatagttctctcccactacctgttaacttgaag aggcttatatggaatgctcagaagacatttaaggttgatttccgaaggccttctgatatg catccaatggaaattgtggaagccattgataagctgcaggagcggcttagggttgttcct ggtgaagatcttttgagtcaagaagctcaaaagaatgctactctcctgtttaacattctt ctccgcagcactttcgctagtaaaagggtcttggaggaatataggctttctcgtgaggca tttgagtgggtagtgggagaaatagaatcaaggttcttgcagtcacttgtagcctctgga gaaatgattggttgtgtggcagcccaatcaattggtgaacctgctactcagatgactctc aatactttccattatgctggtgtcagtgcaaagaatgttacccttggtgttcctaggtta agggaaatcattaatgtggcaaaaagaattaaaacaccttctttgtctgtgtacttaaat cctgatgttggtaaaactaaagagagagccaagagtgtgcagtgtgctttagaatatacc actctaaggagtgtgactcaagctacagaggtgtggtatgatccggaaccgatgagtaca ataattgacgaggatgttgattttgtgaagtcctactatgaaatgccagatgaagaagtt gcccttgaaaagatctcaccttggttgcttcgcatagagttgaatcgcgaaatgatggtg gataagaagttgagtatggctgacattgcagagaagattaaccttgaatttgatgatgat ttgacttgtatatttaatgatgataatgctgaaaaacttatacttcgtatccgtattatg aatgatgaagcacccaagggtgagattcaggacgaatctgctgaagatgatgttttctta aagaaaatagaaagcaacatgctgactgaaatgaccttacgtggtatcccagacatcaac aaggtttttataaagaatactaaagttcagaagtttgatgagagtgaaggttttaagcct aatgaggaatggatgcttgatacagaaggtgtcaaccttctagctgtgatgtgccatgaa gatgttgatgcaaccaggaccacaagcaaccacttaattgaagttattgaagttcttggt attgaggcagttcggcgagctcttttggatgaattgcgagttgtcatttcttttgatggt tcttatgtcaattacaggcatttggctattctttgtgataccatgacttatcgggggcat ttgatggccattacacgtcatggtatcaaccgaaatgatactgggccaatgatgagatgc tcatttgaagagacagttgatattctgcttgatgctgcagtatatgctgagactgatcac ttaaggggtgtcactgaaaacattatgttaggtcagcttgcccccatcggcacaggtgaa tgcgcattgtatcttaatgatgagatgctgaagaatgccattgagctccaactgcctagt tatatggatggtcttgattttggcatgactcctgctcgctccccaatatctggaactcca tatcatgaaggcttgatgtctcctagttatttgttgagtccaaatttgcgtctgtctccc acatcggatgcccaattttcaccttatgttggtgggatggcattttctcccacctcatct cctgggtacagtccatcatccccaggctatagtccatcatcgcctgggtacagccccaca tcacctgggtacagtcccacatctccgggctacagccctacatcaccaggttacagtccg acctctccgacatatagccctagttctccaggatatagtcctacaagtccggcttattcg cctaccagtccatcctactctcccacatcacccagctatagccccacgtcacccagctac agccccacatcacccagttatagccccacatctcccagctacagccccacttcacctgca tacagccccacttcacctgcctatagccccacttcacctgcttatagtccgacttcacct tcctacagtcctacatcaccttcatatagtcctacttcaccttcctacagccccacatca ccctcttacagcccgacctccccatcatatagccctacatcccctgcctacagccccacg tcacctggatacagccctacgtcaccctcatatagcccaacatccccaacgtatagtcct acttccccaagttacaatctacagtcagcaaagtatagtccttcgttagcatattctcca agcagtccaagattgtctccatcaagtccatatagtcccacatccccaaactacagcccc acgtccccttcatattctccgacatctccatcttattctccaacaagcccaacatacagt cccagcagcccatataattctggtgtgagcccagactatagcccaagttcacccccattt agtcccagtacgggttactcaccaagtcaacctggttactcaccatcgtcaaccagccag tacactccgcaaactagtgacaaggatgatagagccactcgctga

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