Phaseolus vulgaris (common bean): PHAVU_007G255400g
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Entry
PHAVU_007G255400g CDS
T03093
Name
(RefSeq) hypothetical protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PHAVU_007G255400g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvu03021
]
PHAVU_007G255400g
Enzymes [BR:
pvu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PHAVU_007G255400g
Transcription machinery [BR:
pvu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
PHAVU_007G255400g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF2635
Motif
Other DBs
NCBI-GeneID:
18627035
NCBI-ProteinID:
XP_007145632
UniProt:
V7BM15
LinkDB
All DBs
Position
7:49353021..49365977
Genome browser
AA seq
1637 aa
AA seq
DB search
MVLFTEGVTNSVKAVGFSFLTSDELLRSSRVKITNPILLNPLLNPVSGGLYDPALGPLDD
KSLCKSCGQGSKHCPGHFGHIELVSPVYNPLMFNILSSILQRTCFSCHHFHASRKEVEMR
TSQFELIMKGDIIRAKSLDSIISDESNHSGDGDESQGVEQLGENWSSLQFSEAMSVLRKF
LLRKYKKCQNCGVVNPRISKPTFGWFHMNVLSDDEARANTMRALESETINDDMSLGGGET
TEEEDITSTGTAKRDKRKKGKLSSKLAAQNKLSGSLLPSQVKGILELLWENEARLCSYIS
DIQDQGFGKKAGHSMFFLENIFVPPIKFRPPTKGGDDVMEHPQTVLLTKVLQGNISLGDA
HINKLDPSKVLSRWMDLQQSVNLLFDNKTSGQGEVAAGICQLLEKKEGIFRQKMMGKRVN
FACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTPWNVTMLRNAILNGPQSHPGATHYT
DQQATVKLPPNGKLLSFISRKLPSSRGVILDHGKISDQEFEGKIVYRHLKDGDVVLVNRQ
PTLHKPSIMAHVVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVN
ANNQYVKPTSGDPIRALIQDHIVSAALLTKKDTFITYEVFIQLLYSSGVSMTGLGSFSGK
HGQKVFMTNSEFEMFLFPPAIWKPEPLWTGKQVISALLYYITRDSPPFTVEKNAKIPSNF
FKTQVRDGKRHTRDKSRNKVEPDDEDKLLIYKNDLVRGVVDKAQFGDYGIIHTVQELYGS
KVAGNLLSALSRLFTTFLQMHGFTCGVDDLMITEEKDVERMDQLRSCEEIGDIVHREFIG
VMNSDIIDPITLQLNIEKKIRSNGEAALTYLDRKMTSNLNSRTSSGILKDLLSDGILKPS
GKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFAPWDCSPRAGG
FIIDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRD
ADGSIIQFHYGEDGVDVHHTSFINKFEALSTNKELVYGNCCRQLDRSSPYINKLPDALKE
KAENFFRDSLKQRNLGSLKRAEFLKLMEHKYVSCLAQPGESVGVLASQSVGEPATQMTLN
TFHLAGRGEMNVTLGIPRLQEIVMAAARDIKTPFMTCPLRSNKSMEEAICLADKLKKITV
ADIIKSMKVSVVPVSVLGGQVCSIYKLVMKLYKPKQYPKYSDITLEDWEDTLRISFVREL
EDAIENHMALLSKISGIKKFKTDPQSHSNSSEDAHGNGSESETKGKSNDDDDDDDVVEDT
EGYEDLGSDAQKRKRQGTDEVDYEDGPEEETHDGVLSEEIENDEDNVDDNMTLDASDSEG
LDELSESKSIFEKDSLKREKKKSRPTTRKYDRAVFVKAKGMHFQIHFKFTGEPDILLAEI
ALRSAKKVCIQNSGRVGECKAVTCKESGVMYYGEDSRKRDDIPASVKEKIPALQTSGVHF
KTFWELQDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNIRHLTLIA
DFMTHSGGYRPMNRNGSIADCTSPFIKMCFETASKFIVEAAYHGQVDNLETPSSRICLGL
PVKMGTGCHDLIQKLEI
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atggttctcttcaccgagggcgtgacgaattccgttaaggcggtggggttcagtttctta
acgagtgacgagttactaaggagcagtcgcgtgaagataacgaatccgattttgctcaat
ccgctgcttaaccctgtttctggtggactatacgaccctgctttgggtccgctggatgac
aagtctctttgcaagtcatgtggtcaaggttctaaacattgccccggtcattttggtcat
attgaacttgtttctcctgtctacaaccctttgatgttcaatattcttagcagtatttta
cagagaacttgtttctcttgccatcattttcatgctagcaggaaagaggtggaaatgcgt
acttctcaatttgagctcataatgaaaggggatattatcagggccaaaagtttggattct
attatttcagatgaatccaaccactcaggtgatggtgatgagagccagggtgttgagcaa
ctgggagaaaattggtcctcccttcaatttagtgaggcaatgtctgttctaaggaaattt
ctgctccgaaaatataagaagtgtcaaaattgtggagtcgtgaatcctagaatcagtaaa
ccaacctttggatggtttcatatgaatgtcctatctgatgatgaggctagagcaaatacc
atgagagctctggaaagtgaaacaatcaatgatgatatgtctttaggtggtggggagact
acagaagaagaagatataacatctactgggactgcaaaaagagataaaagaaaaaaaggg
aaattgtcttccaagctagctgcacaaaataaactttctgggtcgttgctaccatcacag
gttaaaggtattttagagcttctgtgggaaaacgaggcccgactctgctcttatattagt
gatattcaagatcaggggtttggaaagaaagccggtcactcaatgttctttctagagaat
atttttgtgcccccaatcaaattccgtcccccaactaaaggaggtgatgatgtgatggaa
catcctcaaactgttttgttgactaaggttttacaaggcaacatatccttaggagatgcc
catataaataagttagatccttctaaagtactgagccggtggatggatcttcagcaatct
gttaatttgttattcgacaataaaacttctggccagggagaagtagctgctggcatttgt
caattgctagagaagaaagaaggcatctttcgccagaaaatgatgggaaagagagttaat
tttgcgtgccgttctgtcatatcacctgatccttatttggcagtcaatgaaattgggata
cccccatattttgctttaaggttatcctatcctgagagagtgactccttggaatgtcacg
atgttaagaaatgctatccttaatggccctcaatcccatcctggtgctacacactatact
gatcaacaagcaacagtcaagcttccaccaaatgggaagttgctttcttttatatcaaga
aaattaccatcgtcaagaggagttattttggatcatgggaagatttctgatcaggaattt
gaagggaaaattgtgtatcgccacttgaaggatggtgatgttgtgcttgtcaatcgacag
ccaacactccataaacctagtataatggctcacgtagttcgtgttctgaagggagagaaa
actgtacggatgcactatgcaaactgcagtacatataatgccgattttgatggtgatgaa
attaatgtacattttccacaagatgaaatttctcgggctgaagcttacaatattgtaaat
gctaacaatcaatatgtgaaacctacaagcggggatccaatcagagctttgattcaggat
catattgtaagtgctgctcttcttaccaaaaaggatactttcataacttatgaagtgttc
attcaactactctacagttctggtgtatctatgactgggctaggctcattctctggcaaa
cacgggcagaaagttttcatgacaaattctgagtttgaaatgtttttgtttcctccagca
atatggaagcctgaacccctatggacaggaaaacaggttatcagtgcattgctatactat
atcaccagagattcaccaccatttacagttgagaagaatgcaaaaataccatcaaatttt
ttcaaaactcaggtcagggatggaaaaagacatacacgtgataagtcaaggaacaaggtt
gagcctgatgatgaggataaattattgatttataaaaatgatttggtgcggggtgtggtt
gataaggctcaatttggtgactatggtataatacatacagtgcaagaactttatggatcc
aaggttgctggtaacctactctcagcattaagtcggttgtttactacctttttacagatg
catgggttcacatgtggagtagatgatcttatgataactgaagaaaaggatgttgaaaga
atggatcaactcagaagttgtgaggaaattggtgacattgtgcatcgggaattcattgga
gtaatgaatagtgatattatagatccaataacattgcagttgaatattgagaaaaaaata
cgcagtaatggagaagcggccttaacatacttggataggaaaatgacaagcaatcttaac
tcaagaacaagctcaggaatattaaaggatctactatctgatggaatattgaaaccttca
ggaaaaaattgtatttcccttatgactacatctggagctaagggtagtatggtgaatttc
cagcagatatcttctcatctaggccagcaagagttggaaggaaaacgagtcccacgcatg
gtttctggaaagaccttgccctgctttgctccctgggattgttcccctagggctggaggg
ttcattattgatcggtttcttacaggccttcatccacaggaatattactttcattgcatg
gctggtcgtgaagggttagttgatactgcagtcaaaacatctcggagtgggtacctgcaa
agatgcctgatgaaaaaccttgagtgtcttaaagtttgttatgatcatactgtccgagat
gctgatggttcaattattcagtttcactatggtgaagatggtgttgatgtccatcatact
agctttatcaacaaatttgaagcattgtcaactaataaagaattggtttatggcaactgt
tgccgtcagctagacagatcaagtccatatattaacaaattgcccgatgctctcaaagaa
aaagcagagaatttctttcgtgactccttaaaacagagaaatcttggttctctgaaacga
gcagaattcttaaagttgatggagcataagtatgtctcttgtcttgctcaaccaggtgaa
tcagttggtgtattagcttctcaatctgttggcgaaccagctacccaaatgactttgaat
actttccaccttgctggtcgaggtgaaatgaatgtgacacttggaattccacgattgcaa
gaaattgtcatggctgctgcacgtgatatcaaaactccgtttatgacatgccccttgaga
tcgaataaatctatggaagaagctatttgtcttgctgacaaattgaagaaaatcactgta
gctgacataattaagagtatgaaggtttctgttgtaccagtatccgttcttggtggtcag
gtttgcagtatatataaacttgtgatgaagctatataaacctaaacagtatccaaaatac
agtgatattacccttgaagattgggaggacactttaagaatttcctttgtgagagagttg
gaggatgccattgaaaatcacatggcactgctttctaaaattagtggcataaaaaaattc
aagacagatccacaatcacattcaaacagctcagaagatgctcacggcaatggatcagaa
tcagagacaaaaggtaaaagtaatgatgatgacgacgatgatgatgttgttgaagacact
gaagggtatgaagatctgggatcagatgcacaaaagagaaaacggcaaggtactgatgag
gttgattatgaggatggtcctgaagaggaaacacatgatggtgtgctgtcagaggaaatt
gaaaatgatgaggataatgtggatgataacatgacacttgatgctagtgattctgaagga
cttgacgaattatccgagtccaagtctatttttgaaaaagatagtttgaaacgggaaaag
aaaaaatctagaccaacaacaagaaaatatgacagggcagtttttgtgaaagctaaaggg
atgcatttccagatccactttaaatttaccggtgaacctgatattttgttagctgagatt
gctttgagatcagccaagaaggtttgcattcaaaattctggaagggttggtgaatgtaaa
gctgttacatgtaaagaaagtggagtaatgtactatggtgaagatagcagaaaaagggat
gatattccagcctctgtgaaagaaaaaataccagcactgcagacatcaggggtacatttt
aaaacattctgggagttgcaagatgatcttgatgttaggtatatttattcaaacaacgtg
catgctatgctaaatgcttatggggtggaagcagccagggagaccatcatcagggaagtg
caaaatgttttcaaatcttatgggatatcggtaaatatccggcacttgacactcattgct
gactttatgacgcactctggtggctatcgtcctatgaacagaaacgggagcatagcagac
tgcacatcccctttcatcaaaatgtgctttgagacagcttccaaatttattgttgaggca
gcttatcatgggcaggtggacaacttggagacaccatcttccagaatttgtcttggtttg
cctgtgaagatgggaactgggtgccatgacttgatacagaaattggagatatga
DBGET
integrated database retrieval system