KEGG   Phaseolus vulgaris (common bean): PHAVU_007G255400g
Entry
PHAVU_007G255400g CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PHAVU_007G255400g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvu03021]
    PHAVU_007G255400g
Enzymes [BR:pvu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PHAVU_007G255400g
Transcription machinery [BR:pvu03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     PHAVU_007G255400g
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_1 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 DUF2635
Other DBs
NCBI-GeneID: 18627035
NCBI-ProteinID: XP_007145632
UniProt: V7BM15
LinkDB
Position
7:49353021..49365977
AA seq 1637 aa
MVLFTEGVTNSVKAVGFSFLTSDELLRSSRVKITNPILLNPLLNPVSGGLYDPALGPLDD
KSLCKSCGQGSKHCPGHFGHIELVSPVYNPLMFNILSSILQRTCFSCHHFHASRKEVEMR
TSQFELIMKGDIIRAKSLDSIISDESNHSGDGDESQGVEQLGENWSSLQFSEAMSVLRKF
LLRKYKKCQNCGVVNPRISKPTFGWFHMNVLSDDEARANTMRALESETINDDMSLGGGET
TEEEDITSTGTAKRDKRKKGKLSSKLAAQNKLSGSLLPSQVKGILELLWENEARLCSYIS
DIQDQGFGKKAGHSMFFLENIFVPPIKFRPPTKGGDDVMEHPQTVLLTKVLQGNISLGDA
HINKLDPSKVLSRWMDLQQSVNLLFDNKTSGQGEVAAGICQLLEKKEGIFRQKMMGKRVN
FACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTPWNVTMLRNAILNGPQSHPGATHYT
DQQATVKLPPNGKLLSFISRKLPSSRGVILDHGKISDQEFEGKIVYRHLKDGDVVLVNRQ
PTLHKPSIMAHVVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVN
ANNQYVKPTSGDPIRALIQDHIVSAALLTKKDTFITYEVFIQLLYSSGVSMTGLGSFSGK
HGQKVFMTNSEFEMFLFPPAIWKPEPLWTGKQVISALLYYITRDSPPFTVEKNAKIPSNF
FKTQVRDGKRHTRDKSRNKVEPDDEDKLLIYKNDLVRGVVDKAQFGDYGIIHTVQELYGS
KVAGNLLSALSRLFTTFLQMHGFTCGVDDLMITEEKDVERMDQLRSCEEIGDIVHREFIG
VMNSDIIDPITLQLNIEKKIRSNGEAALTYLDRKMTSNLNSRTSSGILKDLLSDGILKPS
GKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFAPWDCSPRAGG
FIIDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRD
ADGSIIQFHYGEDGVDVHHTSFINKFEALSTNKELVYGNCCRQLDRSSPYINKLPDALKE
KAENFFRDSLKQRNLGSLKRAEFLKLMEHKYVSCLAQPGESVGVLASQSVGEPATQMTLN
TFHLAGRGEMNVTLGIPRLQEIVMAAARDIKTPFMTCPLRSNKSMEEAICLADKLKKITV
ADIIKSMKVSVVPVSVLGGQVCSIYKLVMKLYKPKQYPKYSDITLEDWEDTLRISFVREL
EDAIENHMALLSKISGIKKFKTDPQSHSNSSEDAHGNGSESETKGKSNDDDDDDDVVEDT
EGYEDLGSDAQKRKRQGTDEVDYEDGPEEETHDGVLSEEIENDEDNVDDNMTLDASDSEG
LDELSESKSIFEKDSLKREKKKSRPTTRKYDRAVFVKAKGMHFQIHFKFTGEPDILLAEI
ALRSAKKVCIQNSGRVGECKAVTCKESGVMYYGEDSRKRDDIPASVKEKIPALQTSGVHF
KTFWELQDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVNIRHLTLIA
DFMTHSGGYRPMNRNGSIADCTSPFIKMCFETASKFIVEAAYHGQVDNLETPSSRICLGL
PVKMGTGCHDLIQKLEI
NT seq 4914 nt   +upstreamnt  +downstreamnt
atggttctcttcaccgagggcgtgacgaattccgttaaggcggtggggttcagtttctta
acgagtgacgagttactaaggagcagtcgcgtgaagataacgaatccgattttgctcaat
ccgctgcttaaccctgtttctggtggactatacgaccctgctttgggtccgctggatgac
aagtctctttgcaagtcatgtggtcaaggttctaaacattgccccggtcattttggtcat
attgaacttgtttctcctgtctacaaccctttgatgttcaatattcttagcagtatttta
cagagaacttgtttctcttgccatcattttcatgctagcaggaaagaggtggaaatgcgt
acttctcaatttgagctcataatgaaaggggatattatcagggccaaaagtttggattct
attatttcagatgaatccaaccactcaggtgatggtgatgagagccagggtgttgagcaa
ctgggagaaaattggtcctcccttcaatttagtgaggcaatgtctgttctaaggaaattt
ctgctccgaaaatataagaagtgtcaaaattgtggagtcgtgaatcctagaatcagtaaa
ccaacctttggatggtttcatatgaatgtcctatctgatgatgaggctagagcaaatacc
atgagagctctggaaagtgaaacaatcaatgatgatatgtctttaggtggtggggagact
acagaagaagaagatataacatctactgggactgcaaaaagagataaaagaaaaaaaggg
aaattgtcttccaagctagctgcacaaaataaactttctgggtcgttgctaccatcacag
gttaaaggtattttagagcttctgtgggaaaacgaggcccgactctgctcttatattagt
gatattcaagatcaggggtttggaaagaaagccggtcactcaatgttctttctagagaat
atttttgtgcccccaatcaaattccgtcccccaactaaaggaggtgatgatgtgatggaa
catcctcaaactgttttgttgactaaggttttacaaggcaacatatccttaggagatgcc
catataaataagttagatccttctaaagtactgagccggtggatggatcttcagcaatct
gttaatttgttattcgacaataaaacttctggccagggagaagtagctgctggcatttgt
caattgctagagaagaaagaaggcatctttcgccagaaaatgatgggaaagagagttaat
tttgcgtgccgttctgtcatatcacctgatccttatttggcagtcaatgaaattgggata
cccccatattttgctttaaggttatcctatcctgagagagtgactccttggaatgtcacg
atgttaagaaatgctatccttaatggccctcaatcccatcctggtgctacacactatact
gatcaacaagcaacagtcaagcttccaccaaatgggaagttgctttcttttatatcaaga
aaattaccatcgtcaagaggagttattttggatcatgggaagatttctgatcaggaattt
gaagggaaaattgtgtatcgccacttgaaggatggtgatgttgtgcttgtcaatcgacag
ccaacactccataaacctagtataatggctcacgtagttcgtgttctgaagggagagaaa
actgtacggatgcactatgcaaactgcagtacatataatgccgattttgatggtgatgaa
attaatgtacattttccacaagatgaaatttctcgggctgaagcttacaatattgtaaat
gctaacaatcaatatgtgaaacctacaagcggggatccaatcagagctttgattcaggat
catattgtaagtgctgctcttcttaccaaaaaggatactttcataacttatgaagtgttc
attcaactactctacagttctggtgtatctatgactgggctaggctcattctctggcaaa
cacgggcagaaagttttcatgacaaattctgagtttgaaatgtttttgtttcctccagca
atatggaagcctgaacccctatggacaggaaaacaggttatcagtgcattgctatactat
atcaccagagattcaccaccatttacagttgagaagaatgcaaaaataccatcaaatttt
ttcaaaactcaggtcagggatggaaaaagacatacacgtgataagtcaaggaacaaggtt
gagcctgatgatgaggataaattattgatttataaaaatgatttggtgcggggtgtggtt
gataaggctcaatttggtgactatggtataatacatacagtgcaagaactttatggatcc
aaggttgctggtaacctactctcagcattaagtcggttgtttactacctttttacagatg
catgggttcacatgtggagtagatgatcttatgataactgaagaaaaggatgttgaaaga
atggatcaactcagaagttgtgaggaaattggtgacattgtgcatcgggaattcattgga
gtaatgaatagtgatattatagatccaataacattgcagttgaatattgagaaaaaaata
cgcagtaatggagaagcggccttaacatacttggataggaaaatgacaagcaatcttaac
tcaagaacaagctcaggaatattaaaggatctactatctgatggaatattgaaaccttca
ggaaaaaattgtatttcccttatgactacatctggagctaagggtagtatggtgaatttc
cagcagatatcttctcatctaggccagcaagagttggaaggaaaacgagtcccacgcatg
gtttctggaaagaccttgccctgctttgctccctgggattgttcccctagggctggaggg
ttcattattgatcggtttcttacaggccttcatccacaggaatattactttcattgcatg
gctggtcgtgaagggttagttgatactgcagtcaaaacatctcggagtgggtacctgcaa
agatgcctgatgaaaaaccttgagtgtcttaaagtttgttatgatcatactgtccgagat
gctgatggttcaattattcagtttcactatggtgaagatggtgttgatgtccatcatact
agctttatcaacaaatttgaagcattgtcaactaataaagaattggtttatggcaactgt
tgccgtcagctagacagatcaagtccatatattaacaaattgcccgatgctctcaaagaa
aaagcagagaatttctttcgtgactccttaaaacagagaaatcttggttctctgaaacga
gcagaattcttaaagttgatggagcataagtatgtctcttgtcttgctcaaccaggtgaa
tcagttggtgtattagcttctcaatctgttggcgaaccagctacccaaatgactttgaat
actttccaccttgctggtcgaggtgaaatgaatgtgacacttggaattccacgattgcaa
gaaattgtcatggctgctgcacgtgatatcaaaactccgtttatgacatgccccttgaga
tcgaataaatctatggaagaagctatttgtcttgctgacaaattgaagaaaatcactgta
gctgacataattaagagtatgaaggtttctgttgtaccagtatccgttcttggtggtcag
gtttgcagtatatataaacttgtgatgaagctatataaacctaaacagtatccaaaatac
agtgatattacccttgaagattgggaggacactttaagaatttcctttgtgagagagttg
gaggatgccattgaaaatcacatggcactgctttctaaaattagtggcataaaaaaattc
aagacagatccacaatcacattcaaacagctcagaagatgctcacggcaatggatcagaa
tcagagacaaaaggtaaaagtaatgatgatgacgacgatgatgatgttgttgaagacact
gaagggtatgaagatctgggatcagatgcacaaaagagaaaacggcaaggtactgatgag
gttgattatgaggatggtcctgaagaggaaacacatgatggtgtgctgtcagaggaaatt
gaaaatgatgaggataatgtggatgataacatgacacttgatgctagtgattctgaagga
cttgacgaattatccgagtccaagtctatttttgaaaaagatagtttgaaacgggaaaag
aaaaaatctagaccaacaacaagaaaatatgacagggcagtttttgtgaaagctaaaggg
atgcatttccagatccactttaaatttaccggtgaacctgatattttgttagctgagatt
gctttgagatcagccaagaaggtttgcattcaaaattctggaagggttggtgaatgtaaa
gctgttacatgtaaagaaagtggagtaatgtactatggtgaagatagcagaaaaagggat
gatattccagcctctgtgaaagaaaaaataccagcactgcagacatcaggggtacatttt
aaaacattctgggagttgcaagatgatcttgatgttaggtatatttattcaaacaacgtg
catgctatgctaaatgcttatggggtggaagcagccagggagaccatcatcagggaagtg
caaaatgttttcaaatcttatgggatatcggtaaatatccggcacttgacactcattgct
gactttatgacgcactctggtggctatcgtcctatgaacagaaacgggagcatagcagac
tgcacatcccctttcatcaaaatgtgctttgagacagcttccaaatttattgttgaggca
gcttatcatgggcaggtggacaacttggagacaccatcttccagaatttgtcttggtttg
cctgtgaagatgggaactgggtgccatgacttgatacagaaattggagatatga

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