Patella vulgata (common limpet): 126827425
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Entry
126827425 CDS
T09576
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
126827425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvul03400
]
126827425
DNA repair and recombination proteins [BR:
pvul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
126827425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_II
MutS_IV
MUM1-like_PWWP
ANAPC16
Motif
Other DBs
NCBI-GeneID:
126827425
NCBI-ProteinID:
XP_050412694
EnsemblRapid:
ENSPVUG00005018302
LinkDB
All DBs
Position
1:complement(70191588..70215925)
Genome browser
AA seq
1356 aa
AA seq
DB search
MSAKKAQPNTLFSYFSKTPPAKNNANHVLSPKKSPNSDTKNSAVQLQNNFVKPKNGDALP
AGTPRPSVIKTKNSKTATPKNKVKDEPVNGGFELYDVVWAKLEGYPWWPSLVCNHPTANK
FYKGGKVPEIHVQFFDNPTSRAWVRLRNIKPYKGSKDPECQKGGTFYMVNTSIFGPGLEQ
GDKALAMKRPDRSELLVELQPSTDEDGEEEDMELDPDIFDDEMSDEGNNSKENHQDAETK
TPKKTPVKRSGRPERSVKSQKKRRKIMPSADSDEESGDEFKPVSDDSDDESGSSGVDEDD
ISDLDEHSEPESPIKQIKKRKRESKPSRNKKVKAENTDTPSNKSSFQPNVSINTKSKLSL
FSAPDSTSEPGVDSSSFPHLKHDFLQPENIRDIKGRKKSDPEYDPRTLEVPEDFLKKQTP
AMKQWWELKAHYFDTVLFFKMGKFYELFHMDSVIVVNELGLIYMKGEHAHSGFPEIAYSR
YADALIAKGYKVGRCEQTETPDMMAERCKQMTSSVTKFDKVVRRELCQISSQGTKTYQHL
DGDCTSSNNNYLLAVAEKSNNTDECSIYGVCFVDTSIGTFHVGQFTDDRHCSRLRTLIAH
HTPSQVLYERGKLSQHSMTLINTNLTSVIKESLSSGSEFWDSNKTLKVLAEADYFKETEE
FEWPETLKAMLAEGDSMGMTSADDYELAVSALGAMTWYLQYCLLDEELLSMKKFEEYKPL
DRKIKAVEFDQKHMVIDGITLTNLDVAENSVSGDQQGTLLHKLNFCSTPFGKRLFRNWMC
APLCRPAAINDRLDAVDDLMASQELVEDIVEVLKKIPDLERLLSRIHVLGSANRSKHHPD
SRAILYEEVTYSKRKIEDFLSTLGAFESSLKIIKKCQKQKDKFKSKLLKKSVTMEKDGGH
FPDIAESLKFFEAAFDHDKAKKDGIIIPTKGVDEEYDTAVTDILSTEDELNTYLDSQRKA
LSCRAIVYWGTGKNRYQMEIPEVAVPRIPDDYNLMSSKKGWKRYRTTEIDDMLVTLTDAE
DRKDAALKDVMRRLFHSFDERHKEWSGVVECMSVLDVLISMSKYSRCSDGVMCRPEFIMP
DENTQPFIEIREGRHPCITKTFGGSDFIPNDTVIGTKDDVDDEEDGCCGNSKVVLVTGPN
MGGKSTLMRQVGLITVIAQMGCYVPAEKCCLTPIDRIFTRLGASDRIMSGESTFYVELSE
TSAILQHATKHSLVLVDELGRGTATYDGTAIACSVVEELSRSISCRTLFSTHYHSLVEQF
SHDQNVRLGHMACMVENETEDPSQETITFLYKFVKGACPKSYGFNAARLADLPEEVIKCA
INKAKEFEETVEKGKLLRKLWNGCSKDTVEKLIKQT
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaagaaggcacaaccaaacactttattttcttactttagtaaaacgcctccg
gcgaaaaacaacgccaatcatgtcttgtcaccgaaaaaatcgccgaattctgacacgaaa
aattctgcagtacaacttcaaaataattttgtcaaacccaaaaatggtgatgctttgcct
gcaggtacaccaagaccgtcagtgattaagactaagaattcaaagacagcaacaccaaaa
aataaagtaaaagacgagcctgtaaatggaggttttgaactctatgatgtagtatgggct
aaattggaaggctatccatggtggcctagtttagtatgtaatcatccaacagccaataaa
ttttataaaggtggtaaagtaccggaaattcatgttcaattttttgataatcctaccagc
agagcatgggttagattaaggaatataaagccatataaggggtcaaaggacccagaatgt
cagaaaggtggcactttttatatggttaatacctctatatttggaccaggtttagaacaa
ggagataaagccctggctatgaaaagacctgatagatcagagctattagttgagttacag
ccgtccactgatgaagatggagaagaagaggatatggaattagatcctgacatatttgat
gatgagatgtcagatgaagggaataatagtaaagaaaatcatcaagatgctgaaactaag
acaccaaaaaagactccagtgaaaagaagtggtagaccagaacgttcagtgaaatcacag
aaaaaaaggcgtaaaataatgccatctgctgatagtgatgaagaatcaggtgatgaattt
aaacctgtatcagatgatagtgatgatgaatcgggtagtagcggtgtagatgaagatgat
atatcagatttagatgaacattccgaaccagaatcaccaatcaagcaaattaagaaaagg
aagcgtgaatcgaaaccatccagaaataagaaagtaaaagcagagaataccgatactcca
agcaataaatcaagttttcaacctaatgtatcaatcaacaccaaatcaaaactatcgctc
ttctcagcacctgattcaacaagtgaaccaggtgtagatagttccagtttcccacattta
aaacatgattttctacaaccagaaaatatcagagacataaaaggtcgaaagaagtctgac
cctgaatatgacccgcgcaccttggaagttcctgaggatttcctgaagaaacagacacct
gcgatgaagcagtggtgggaattaaaagcccattattttgatactgttttgttttttaag
atgggaaaattctatgaattatttcacatggactctgttatagttgttaatgagttagga
ttaatctacatgaagggagagcatgcccattcaggattccctgagatagcatacagtagg
tatgctgatgcactaattgctaaaggttataaggtcgggagatgtgaacagacggaaaca
ccagacatgatggcagaaagatgtaaacaaatgacatcaagtgtaacaaagtttgataaa
gttgtacgtagagaattgtgtcagatatcatcacaaggtactaaaacatatcaacattta
gatggggattgtaccagttctaataataactatcttctagctgttgctgaaaagagtaat
aatacagatgaatgtagtatttatggtgtttgttttgtggatacatccattggaacattt
catgttggtcagtttacagatgatagacattgttctaggttgcgaacattaatagctcat
catactccttcacaggtattatacgagcgaggaaagttatcccaacattccatgacactt
ataaacaccaatttaacctccgttatcaaggaatctttatcgtcaggatcagagttctgg
gatagcaataaaacactaaaggttttagcagaagcagactattttaaagaaacagaagaa
tttgaatggccagaaacactaaaggctatgttagcggaaggagatagtatgggtatgaca
tcagcagatgattatgaactagcagttagtgcccttggtgccatgacatggtatttacaa
tactgtctattagatgaagaattgttatcaatgaagaaatttgaagaatataaaccttta
gacagaaagatcaaggctgttgaatttgatcagaaacacatggtaatagatggaattacg
ttaactaatctagatgtcgctgaaaattctgtttctggagatcagcaagggacattactc
cacaaattaaacttctgctcaactccatttggaaaacgattgttccgtaattggatgtgt
gcaccattatgtcggccggctgccattaacgaccgtctggatgctgtagatgatttaatg
gcatcgcaggaactagtggaagacattgtagaagtattgaagaaaataccagatttagaa
agattacttagccgaatacatgttttaggatcagctaatcgtagtaaacatcatccagac
agtagagctatattatatgaagaagtaacatatagtaaaagaaaaatcgaagactttttg
tccacattaggagcatttgaatcatctttaaaaataattaaaaaatgtcaaaaacaaaaa
gataaattcaaatccaaactgttaaaaaagagtgttaccatggaaaaagatggtggacat
tttcctgatattgctgaaagtctgaaattttttgaggctgcgtttgatcatgataaagct
aagaaagatggtattataatacctactaaaggtgtagatgaagaatatgatacagctgtt
acagatatattatctacagaagatgaattaaatacttatttagattcacaacgtaaagct
cttagttgtagggcaatagtatattggggaactggtaagaatcgttatcagatggagata
ccagaagttgcggtgcctagaataccagatgattataatctaatgtcttctaagaaaggc
tggaaacgatatcgtacaacagaaatagatgacatgttggttacactaacagacgcggaa
gatagaaaagatgcagcacttaaagatgtcatgagacgattgtttcacagttttgatgaa
agacacaaagaatggagtggtgtagtagaatgtatgtcagtactggatgttctgatctcc
atgtctaaatatagccgctgtagtgatggtgtcatgtgtcgaccagagttcataatgcct
gatgaaaatacacagccatttatagagatccgtgaaggtcgacatccatgtataactaaa
acatttggtggaagtgattttatacctaatgatactgtcataggaactaaagatgatgta
gatgacgaagaagatggttgctgtggtaatagtaaggttgtcttggttacaggacctaat
atgggtggtaaatcaactttaatgaggcaagtcggactgataacagttatagctcaaatg
ggatgttacgtaccagcagaaaaatgttgtctgacaccaatagatagaatatttacacgt
ctgggtgctagtgacagaattatgtctggtgaaagtactttctacgtcgagttgagtgaa
acctcagccattttacaacatgctacaaaacattctttagtactggtagatgaattaggt
cgaggaacagctacgtatgatggaacagctatagcttgttcagttgtagaagaattatca
cgcagtatatcatgtcgtactttattctctacacattatcattcattggttgaacaattc
agtcatgatcaaaacgtacgacttggtcacatggcatgtatggtagagaatgagacagag
gatccatctcaagagacaatcacattcctttataaatttgttaaaggggcttgtcccaag
agttatggttttaatgctgcaagattagcagatttacctgaagaggttataaaatgtgcc
atcaacaaagccaaagaatttgaagaaactgttgagaaggggaaattactcaggaaatta
tggaatggttgttctaaagacacagttgaaaagttgataaaacagacatga
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integrated database retrieval system