Plasmodium vinckei vinckei: PVVCY_0700900
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Entry
PVVCY_0700900 CDS
T08061
Name
(RefSeq) clp1-related protein, putative
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PVVCY_0700900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvv03019
]
PVVCY_0700900
Enzymes [BR:
pvv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
PVVCY_0700900
Messenger RNA biogenesis [BR:
pvv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
PVVCY_0700900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_N
CLP1_P
Clp1
nSTAND3
DUF3911
Motif
Other DBs
NCBI-GeneID:
19962523
NCBI-ProteinID:
XP_008626180
UniProt:
A0A081IB13
LinkDB
All DBs
Position
PVVCY_07:complement(301916..303679)
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AA seq
587 aa
AA seq
DB search
MENANNTRIYHLKMYRELRIVTLEKPLKNEENEECIKIRILPSQGNNSEDKNTQMCVAEI
FGKELVVDKDYYFGYNEKFSIYTFTGCIVQIKGKTLQEYESKNSTIKEYLSLSYVLDAYR
NLAKKKKKIGPRVLITGNNNSGKSSVSMLLLNYALKSGFKPIYIETDTKGNCDKMDINRG
PGVMSCFIYDNNEGANSGNLNSNNINSSSLNSGSLNSTNLNSRFRYSLDYFFGYLDILDD
INLYYHINECISSCIYLMLLNNLNYYSGNLKNNTDQEVIYSSGFILNVPSEADIKIINNL
IDIYNINIVVIIDNSFLHYSLKEYYDKEEKQGSLENFNKPDNIQQFNENVEKKEYSNSGL
YKSSKNIRYDEEDFINIEKENDNIQTNNDKEENDDTGNKIEIIGMPKYEGVIPSDNTRAR
YCRNLWFYDYFYKNINLNNTIYKKCHIITIKYNQTNFVRLDTKLAVPLSALPADWQNVKR
ETVSVISYNGNIKNLMNCVLGISYSKQINYVHLMNIAGFAHVQNVREVEIENDDQKNENN
NVEDIDKNTDTQTVSDFFIDIICPVSVTTKNIPPYFIVPGNMKHIRF
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgcaaataacaccagaatttatcatttgaaaatgtatagggaacttcggata
gttacccttgaaaagccattaaaaaatgaagaaaatgaggaatgcataaaaattagaata
ttaccaagtcaaggaaataatagtgaagataaaaatacacaaatgtgtgtagctgaaata
tttgggaaagagctagtagttgataaagactattattttggatataatgaaaaattttct
atatacacttttactggatgtatagttcaaataaaaggaaaaacattacaagaatatgaa
agtaaaaattctacgatcaaagaatatttatccttatcttatgttttagatgcttataga
aatttagcaaaaaaaaaaaaaaaaattggaccacgagtattgataacaggaaataataat
tctggaaaaagttctgtttctatgcttttgttaaattatgcactaaagtctggatttaaa
cctatatatatagaaacagatacaaaggggaattgtgataagatggatataaatcgaggc
cctggagttatgagttgttttatatatgacaataatgaaggtgcaaatagtggcaaccta
aatagtaacaacataaacagcagtagtttaaatagtggtagtttgaatagcaccaactta
aatagccgttttcgatattctttggattatttctttggatatctagacatattagatgat
ataaacttgtattatcatattaatgaatgtataagtagttgtatatatttgatgttgtta
aataatttaaattattattcaggtaatttaaaaaataatacagatcaagaagttatatat
tcatctggatttattttgaatgtgccatctgaagcagatattaaaattataaataatttg
atagatatatataatataaatatagttgttattattgataattcttttttacattattca
ttaaaggaatattatgataaagaagagaagcaaggtagtttagaaaattttaataagcca
gataatattcaacaatttaatgaaaatgttgaaaaaaaagaatatagtaattccggatta
tataaatcaagtaaaaatattagatatgatgaagaagattttataaatattgaaaaagaa
aatgataatattcaaacaaataatgataaagaagaaaatgatgatacaggtaataaaatc
gaaataattggaatgcctaaatatgaaggtgttataccatctgataatactagagcacga
tattgtaggaatttatggttttatgattatttttataaaaatataaatttaaataataca
atatataaaaaatgtcatatcataacaattaaatataatcaaacaaattttgttcggcta
gatacaaagttagcagttcctttatctgctttacctgcagattggcaaaatgtaaaaaga
gaaacagtttcagtaattagctataatggaaatataaaaaatttaatgaattgtgtatta
ggtatatcatattctaaacaaattaattatgtccatcttatgaatatagcaggttttgca
catgtacaaaatgtaagagaagttgaaatcgaaaatgatgatcaaaaaaatgaaaataat
aatgttgaagatattgataaaaatacggatactcaaacagtaagtgatttttttattgat
attatatgcccagtttctgtgacaacaaaaaatataccaccatattttattgtcccagga
aatatgaagcatatccgattttga
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