KEGG   Plasmodium vinckei vinckei: PVVCY_1103670
Entry
PVVCY_1103670     CDS       T08061                                 
Name
(RefSeq) high mobility group protein B4, putative
  KO
K03004  DNA-directed RNA polymerase I subunit RPA43
Organism
pvv  Plasmodium vinckei vinckei
Pathway
pvv03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pvv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PVVCY_1103670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvv03021]
    PVVCY_1103670
Transcription machinery [BR:pvv03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     PVVCY_1103670
SSDB
Motif
Pfam: HMG_box_2 HMG_box CBFD_NFYB_HMF Histone TFIID-18kDa CENP-X
Other DBs
NCBI-GeneID: 19960557
NCBI-ProteinID: XP_008624233
UniProt: A0A449BVQ6
LinkDB
Position
PVVCY_11:complement(join(1299361..1299530,1299705..1299770,1299881..1299925,1300015..1300102,1300231..1300269,1300382..1300457,1300607..1300641,1300744..1300803,1300900..1300968,1301133..1301235,1301441..1301448))
AA seq 252 aa
MDRKKPKAPLSSYLIFCNYERENVKQYLAQNADPNTTIKITDIQKELSNKWKILSDDERK
VYEEQAQLLKLKYNEELIEWQQSRNKDDPINNITNITAKFPTLKIQKIMHLNKNVKKVNG
EAMNIFQKAVVMFLIELVTKTVEYKNEKQMSQYLTTKDIVSCIQREGIKYKFLEDCLYLL
TEPRTTLSFIEEEDNHESIFDLCEEDKKEYNYDIEEKNMIKMKKRANNTKSNKKALENQN
IYADITTFFKKK
NT seq 759 nt   +upstreamnt  +downstreamnt
atggacagaaaaaagcccaaagcgcctttatcgtcctatttaattttttgtaattacgaa
agagaaaatgtaaaacaatatttagcacaaaacgcggatcccaacacaacaattaaaata
acagatattcagaaagagttgagtaataaatggaaaattttgtctgacgatgaaaggaag
gtatacgaagagcaagcacaacttttaaaattaaaatataatgaagaattgattgaatgg
caacaatctagaaataaagatgatcctataaataacattacaaatatcacagctaaattt
ccaacattaaaaattcagaagattatgcatttaaacaagaatgttaagaaggtcaatggt
gaagctatgaatatttttcaaaaagcagtggtgatgtttttaattgaattagttaccaaa
acggttgaatataaaaacgaaaaacaaatgtctcagtacttaaccaccaaagatatagta
tcttgtatacaaagggaaggaataaaatacaaatttcttgaagattgcttatatttgtta
actgaaccacggactactttatcatttatcgaagaagaagacaatcatgaatccatattt
gatttatgtgaagaagataaaaaggaatataactacgacatagaggaaaagaatatgata
aagatgaaaaagcgagctaacaatacaaagagtaataaaaaggcattggaaaatcaaaac
atatatgctgatattactacattttttaaaaaaaaataa

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