Pseudomonas vanderleydeniana: HU752_026575
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Entry
HU752_026575 CDS
T07587
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pvw
Pseudomonas vanderleydeniana
Brite
KEGG Orthology (KO) [BR:
pvw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvw03009
]
HU752_026575 (rimO)
Enzymes [BR:
pvw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HU752_026575 (rimO)
Ribosome biogenesis [BR:
pvw03009
]
Prokaryotic type
ribosomal protein modification factors
HU752_026575 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QXI27431
UniProt:
A0A9E6TRJ0
LinkDB
All DBs
Position
5911249..5912586
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AA seq
445 aa
AA seq
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MSTPTAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIREVHPSVLAVTGPQQYEQVVGAVHEVVP
PRQDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKAGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKLLPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKNWREICPE
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLDVVPDEVK
QDRWERFMAHQQAISSARLQQRIGKEIEVLIDEVDENGAVGRCFFDAPEIDGNVFIDGAG
DLKPGDKIWCRVVDADEYDLWAERL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccccaccgcaccggccaatcccaaggtcggcttcgtaagtcttggttgcccg
aaggccctcgtggactccgagcgcatcctcacgcaactgcgcatggaaggctatgacgtc
gtctccacctaccaggacgccgatgtcgtggtggtcaacacctgcggtttcatcgacagc
gccaaagccgaatccctggaagtgatcggtgaagcgatcaaggaaaacggcaaggtcatc
gtcaccggctgcatgggcgtggaagaaggcaacatccgcgaggtgcaccccagcgtgctg
gcggtcaccggcccacagcagtacgagcaggtggtcggcgcggtacacgaggtggtaccg
ccacgccaggaccacaacccgctgatcgacctggtgccgccacagggcgtcaagctgact
ccgcgtcactacgcctacctgaagatttccgaaggctgcaaccacagctgcagcttctgc
atcatcccgtcgatgcgtggcaagctggtcagccgtccggtcggcgacgtcctcgacgaa
gcccagcgcctggtcaaggccggcgtcaaggaactgctggtgatctcccaggacaccagc
gcctacggcgtcgacgtgaaataccgtaccggcttctggaacggcgccccggtcaagacc
cgcatgaccgagctgtgcgaagcgctcagcaccctgggcgtctgggtacgcctgcactac
gtctacccgtacccgcacgtcgacgagctgattccgctgatggccgccggcaagctgctg
ccgtacctggacatcccgttccagcacgccagcccgaaagtgctcaagtccatgaaacgc
ccggcgttcgaggacaagaccctggcgcggatcaagaactggcgcgagatctgcccggaa
ctgatcatccgttcgaccttcatcgtcggcttccccggcgaaaccgaggaagacttccag
tacctgctcgactggctgaccgaagcccagctcgatcgcgtcggctgcttccagtattcg
ccggtcgaaggcgcaccggccaatgacctgggcctggacgtggtcccggacgaggtcaag
caggaccgttgggaacgcttcatggcgcaccagcaggccatcagctcggcccgcctgcaa
caacgcatcggcaaggaaatcgaagtactgatcgacgaagtcgacgagaacggtgccgtt
ggccgttgcttcttcgatgccccggaaatcgacggcaacgtcttcatcgacggtgccggt
gacctcaagccaggcgacaagatctggtgccgggtggtcgacgccgacgaatacgacctc
tgggccgaacgcctgtaa
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