Pistacia vera (pistachio): 116142055
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Entry
116142055 CDS
T07386
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear-pore anchor
KO
K09291
nucleoprotein TPR
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116142055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116142055
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116142055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
HALZ
Motif
Other DBs
NCBI-GeneID:
116142055
NCBI-ProteinID:
XP_031283370
LinkDB
All DBs
Position
Unknown
AA seq
2110 aa
AA seq
DB search
MPLFLSDEEMSRLSNDAVSLAAKADAYIRELQSELETVKARADAASITAEQTCSLLEQKF
ISLSENYSKLESEHAQLKISLDERDKELAQFHAEKHQLHLQSIGKDGDVERLSTEVAELH
KSRRQLMEMVEQKDLVISEKNATIKTYLDKIINLTDNAAKKESHLAQIEAELARSQATCT
RLWQEKELIERHNAWLNEELTSKVNSLVELRRTHADLEADMSAKLSDAERRSSECSSSLN
WNKERVRELEIKLTSLQEEFCSSKDAAAVNEERLSAELSTVNKLVELYKESSEEWSRKAG
ELEGVIKALETHLTQAENDYKEKLEKEVSARKHSEKEAAELKEKLEKCEAEIESSRKANE
LSLLPLSSFRSEAWKESSDANEFSEDSRSLVPKIPVGVSGTALAASLLRDGWSLAKMYAK
YQEAVDALRHEQLGRRESEAVLQRVLYELEEKAGVILDEREEYERMVEAYSVINQKLQNS
VSEQSSLEKTIQELKADLRRRERDYNLAQKEINDLQKQVTVLLKECRDIQLRCGSSRHDY
AEESTAVAAVEVNVNGEFDAEKVISDRLLTFKDINGLVEQNVQLRSLVRSLSDQIDSREI
EFKEKFELELKKHTDEAASKVAAVLQRAEEQGHMIESLHTSVAMYKRLYDEEHKLRSSHP
QTVDATPVDGRRDLLLLLEGSQEATKKAQEKAAERVRFLEEDLEKSRSEIISLRSERDRS
VLEAKFAREKLDSVLKEAEHQKVEINGVLARNVEFSQLIVDYQRKLRESSESLNAAEELS
RKLNMEVSILKHEKDMLSNAEKRALEEVRSLSERVYRLQASLDTIQSAEEAREEARATER
RKQEEYIKQVEREWAEAKKDLQEEXNNVRTLTSDREQNLKNAVKQVEEMGKELANALHAV
TAAETRAAVAEARLSDLEKRMKSSDAKVVISVEYCYFHVISVGEVDDGSRLSTNEVGTNF
YMMFPWCCVELRRQRKSWKLKRSTGQQGSHASGMSNIMSIEHSTRNEDALXQMEVAHENF
KTEAEKLKKSLEAEVLSLRERVSELENENIMKSEQPLQLQXRRCCCFSLAEITGLKEEYQ
LKCETSNCMTMEVQISALKENLRKSMXRWRAAQANYERLFLQSETIQELQKTSQALASLQ
DEASXLRKLADLAKPKIELKGKWEVEKSVLEKSKNEAEKKFNEVNEQNKILHTRLEALHI
QLAEKDRSSVGISSGSTGTNSLGDSGLQNVVNYLRRSKEIAETEISLLKQEKLRLQTQLE
SAQRAAENAQTSLHAERANSRALLLTEEQIKSLQLQVREMNLLRESNMQLREENKHNFEE
CQKLRDVAQKARADYDNLENLLRERQIEIEACKKEIEALKKETEMLRMEKENLEKRVCER
CRNIDVEDYNRLKIDVRQMEEKLKAKDTEIEEMKTLGSKRQETIMQLEQQLASSRVELNE
KEKKLNDILQAEAVRKPELEKQKRIIGQLKRKHDILSKEKEGIFKENQALSKQLDELKQG
KKSMGDVTGEQVMKEKEEKDTRIQILERTVERQREELKKEKDDHQKEKERRQKGEKAIWD
SAKNADQWKIKISSELEQHKQAVKRLSDELLKIKNAECNLPEGTLVVQHLSGTNLDDRAS
SYLLAVENFERVARTVSSELGSGAPPPDTSVVSDASATATTGPAVATQALISSSSAGPAP
SNLPPKAADGKDRLVLARTIVETRKQGRKLVRPRLGKPEEAQGDVEMTEAEGSSLGGKVA
SSQDVETQVNLTQQSQPLVRKRLASSTSELREESLLQGEPTTDIAAPAPKKSKGTDSPPE
DAGGQSAAPLENIDSQPVIEESIDAVSDIPQEEAVDAEKEEVDTTGEKTEELKESQQVDG
ASEAEMQNEKNNASEENLDKATGAEMASDEGLKDQTEQENQLLTLESESEREEGELLPDV
TDPEGVADISNLVGSPEIGEVLPEVIGTPVVSPTRVEDEAMVAVAAETGDVTSPEAANDE
KNEEGDVTEENVEGSDKSNDGNDHVAVEADQVPEAASVISETASTSSAAEPEASKQLSSS
TTTAAEVKQASPVNNPPTIVNLRERARERAMQRQAGVVPPSVSRGRGRPAGRGRGARGGR
GGRGQTPGQQ
NT seq
6333 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgttcctctccgatgaggagatgtcccgcctctccaatgatgccgtctcgctg
gcggccaaggctgacgcctacatacgagaactccaaagcgaactcgagaccgtcaaggct
cgcgccgacgctgcttctatcacggccgagcagacttgttccttgcttgagcagaagttt
atttcgttatcggaaaattactcgaagctcgagtcggaacatgctcagcttaaaatttct
ctcgatgagcgcgataaggaactcgctcaattccatgcggagaagcaccagctccattta
caatcgattgggaaagacggtgacgtagagaggttatcgactgaagtggcggagctgcat
aagtcacggaggcagttgatggagatggtggagcaaaaggatttggtgatcagtgagaag
aatgctaccattaagacttatttagacaagattataaacttgactgacaatgctgcaaaa
aaagaatcacatttggctcaaattgaggcagagttagctcgttctcaggctacctgcact
cgtctttggcaggaaaaagaacttatagaaaggcataatgcttggcttaatgaggagttg
acatccaaggttaacagtcttgttgagctgcggagaacacatgctgatcttgaggcagat
atgtcagctaagctttcagatgccgagagacgatccagtgaatgctctagctctttaaat
tggaacaaagaaagagtgcgggagctagagataaagttaacatcattacaggaggaattt
tgctcctcaaaggatgctgctgctgtcaatgaagagcgattgtcagctgaactttcaaca
gtaaataaacttgttgagttgtataaggaaagttcagaggaatggtctcgaaaggcagga
gagcttgagggtgtgataaaagctctggaaacccacctgactcaagctgaaaatgattat
aaagagaaacttgaaaaggaagtttctgcaaggaagcattctgaaaaggaggctgcagag
ttaaaggagaagcttgaaaagtgtgaagccgaaattgaaagtagtcggaaagcaaatgaa
ttgagtcttcttccactcagcagtttcagatctgaagcctggaaggagtcatcagatgcc
aatgaattttctgaggatagtcgctcgcttgtgcctaagattcctgtgggtgtctcagga
acggcactagctgcttcacttctgcgtgatggctggagtcttgctaaaatgtatgcaaaa
tatcaagaggctgttgatgccctgagacatgagcaattgggaagaagggaatctgaagca
gtactacaaagggtcctatatgaactagaagagaaagcaggggttattttggatgaaaga
gaggagtatgaaaggatggttgaggcttactctgtgatcaatcaaaaattgcagaattct
gtctctgaacagtcaagtttggagaaaaccattcaggaactaaaggctgatttgaggaga
cgtgaacgtgattacaatctggcacagaaggagattaatgaccttcagaaacaagtgaca
gttcttctcaaggaatgccgtgatatacaacttcgctgtggatcctctaggcatgattat
gctgaagagagtacagctgttgctgcagtagaagtgaatgtgaatggagagtttgatgct
gaaaaagtcatttcagatcgtcttttgacatttaaggacataaatggattagttgagcag
aatgtccagttgaggagccttgtgcgaagtctgtctgatcagattgatagcagggagata
gaattcaaggaaaagtttgagttggagcttaaaaagcacacagatgaagctgcctctaaa
gttgctgcagtgttgcaaagagctgaagagcaagggcatatgatcgaatcacttcacacc
tctgttgctatgtataaaagactatatgatgaggaacataaactgcgttcttcccatcca
cagactgtagatgccactcctgtggatgggaggagggacctcttacttcttctggaaggt
tcccaggaggctaccaaaaaggcccaagagaaggcggcagaacgagtcagatttcttgaa
gaagatttggaaaagtctaggagtgaaattatatcactaagatcagagcgtgataggtcg
gttttggaagcaaaatttgcgagggaaaagcttgatagtgttctgaaagaagctgaacat
cagaaagttgaaatcaacggtgtattagctagaaatgtggagttttcacagctgatagta
gactatcaacggaagctgcgtgaatcttcagagtctttgaatgctgctgaggagctttcc
cggaagttaaatatggaggtatctattttaaagcatgaaaaagatatgttgtcaaatgct
gaaaagagggctcttgaggaagtccgtagtttgtcagagagagtgtaccgactgcaggct
agtttggacactattcagagtgctgaggaagctcgtgaggaagctagagctactgagagg
agaaaacaagaagagtatataaaacaagttgagagggaatgggctgaggctaagaaggac
ctgcaagaagagtgaaacaatgttcgaactctcacatctgaccgtgagcagaacttgaaa
aatgctgtgaagcaagttgaagaaatggggaaggaattggctaatgctttgcatgctgtt
acagctgctgagactagggctgctgtggccgaggctagactttctgatcttgaaaaaagg
atgaaatcatcagatgctaaggtagttatatctgttgagtattgctattttcacgttata
agtgttggcgaggttgatgatggtagcagattatcaacaaatgaggtcggtactaatttt
tacatgatgtttccttggtgttgtgtagaattgcgtaggcaaaggaagagctggaaattg
aagagaagcacaggccaacaaggatcacatgcttcaggaatgtctaacatcatgagtata
gagcatagcacaagaaatgaagatgcactgnaacagatggaagtcgctcatgaaaacttc
aagactgaggcggaaaagttaaagaaatcattagaagccgaagttctttcacttagagag
agggtttctgagcttgaaaatgaaaatattatgaagtccgagcagcctctgcagctgcag
taaaggagatgctgttgcttctccctagcagaaatcactggtttgaaggaagaatatcag
ttaaaatgtgagactagtaactgcatgacaatggaagttcaaatatctgctctgaaagag
aacttaagaaagagcatgnnacgatggcgtgctgctcaagctaattatgaaagacttttt
ttgcagtctgagactattcaggagttgcaaaaaacatcacaagctttggcttcattgcaa
gatgaagcatcanagttgcgtaaattggcagatcttgcaaagccgaaaattgaactaaag
ggtaagtgggaggtagagaaatcagtgttagagaaatcaaagaatgaagctgaaaagaag
ttcaatgaagttaatgaacagaacaagatattgcacactcgacttgaggctttgcacatt
caattggcagagaaggatcgaagttctgtcggaatttcttcaggaagcactggtactaat
tcacttggtgattctggtttgcaaaatgtggttaattatcttcgaagatcaaaagaaatt
gcagaaacagagatatctttgttaaaacaagaaaagctgcgtttgcaaacacaacttgag
agcgctcaacgggctgcagagaatgcccaaacttcacttcatgctgagcgggcaaattca
agagctttattgttgacagaggaacagatcaaatcattacagcttcaggttagagaaatg
aatttgcttcgtgaaagcaacatgcaactcagagaggaaaacaagcacaattttgaggag
tgccagaaactacgtgatgtagctcaaaaggctagggctgattatgacaatctagagaat
ctattgagggagagacaaattgaaattgaagcttgtaagaaagaaattgaagctttaaag
aaagaaactgaaatgctgaggatggagaaggaaaacctggaaaagagggtttgtgagagg
tgtagaaatattgatgtggaagattacaatcgcctgaagattgatgttcgacaaatggag
gaaaaactaaaagctaaggatactgagatagaggaaatgaagacccttggttctaaaagg
caagaaacaattatgcaattggagcaacaacttgcaagcagcagggtggaactgaatgag
aaggaaaagaagctaaatgatattttgcaggcagaggctgtgaggaagccagagttggaa
aagcaaaagaggattattggtcagctaaagaggaagcatgacattttgtcgaaggaaaag
gagggaatttttaaagaaaatcaggcactttccaagcagttagacgaattgaagcaaggt
aaaaagtctatgggtgatgttactggcgagcaggttatgaaggaaaaagaggagaaagat
actagaatacagattctggagagaactgtggagagacaaagagaggagttgaaaaaggag
aaagatgatcatcagaaggagaaagaaaggcgccagaagggggaaaaggcaatttgggat
tctgctaagaatgctgatcagtggaaaataaagatttcaagcgaacttgagcagcataag
caagctgtgaagcgtctttcagatgaactactgaagataaaaaatgctgagtgcaatctt
ccagagggtacattggtggtccagcatctctctggtacgaatttggatgatcgtgcttca
tcttatttattggctgtagaaaattttgaaagagtggcacgcacagtttctagtgagctt
ggatctggtgcccctcctccggacacttctgtagtctcagatgcttccgcaacagctact
acaggtccagcagttgctacccaagcactgatttccagttcttcagcaggacctgcacca
agtaatttaccaccaaaagcagcagatggaaaagatagattagttcttgccagaaccatt
gttgaaactcgtaagcaagggcgcaagttagtccgcccccgacttggtaaacctgaagaa
gcacagggtgatgtagagatgacagaggcagaaggatctagccttggtgggaaggttgca
tcatctcaggatgtggaaactcaagtcaatctcactcaacagagtcaaccattggttcgt
aaacgcctggcttcatctacttctgagttacgtgaggagtcactcctacaaggggagccc
accactgatattgctgcacctgcgccgaaaaagtccaagggaacagattccccaccagag
gatgctggaggacaatctgcagctccattggaaaatattgattctcaaccagttatcgaa
gaatctattgatgctgtgagcgatataccccaagaagaagctgttgatgctgagaaggaa
gaggttgatactactggagagaagactgaggagctaaaagaatcacaacaggtagatggg
gcaagtgaagctgaaatgcagaatgagaagaataatgcttcagaagagaatttagataag
gcaactggagcagagatggcatctgacgagggtctaaaggatcagactgagcaagagaac
caactgttgacactagaatccgagagtgagagagaagagggagagctattaccagatgta
acagatcctgagggagttgctgacatttcaaatctggtagggagccctgaaattggggaa
gttctgcctgaggttattggaactcctgtggtgtcacccacaagggttgaggatgaagct
atggttgcagtagcagcagaaactggtgatgtcacttcacctgaggctgcaaatgatgag
aaaaatgaagaaggtgatgtgactgaagagaatgttgaaggttctgacaagtcgaatgat
ggtaatgaccatgttgcagtagaggcagatcaggtgcctgaagctgcttcagttatcagt
gagacggcctcaacaagttcagctgccgaacctgaggcctcaaagcaacttagttccagt
acaacaacagcagctgaagtaaaacaagcttcccctgtcaataatcctcctactatagta
aacctacgagagcgagcgagggagagggctatgcaaagacaagctggagtagtgccacca
tcagtaagtagaggccgtggaagaccagcaggacgtggtcgaggtgctcgtggtgggcgt
ggtggacgtggacaaactcctggtcaacaatga
DBGET
integrated database retrieval system
