Pectobacterium versatile: OA04_26050
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Entry
OA04_26050 CDS
T07772
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pvz
Pectobacterium versatile
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvz03009
]
OA04_26050 (rimO)
Enzymes [BR:
pvz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
OA04_26050 (rimO)
Ribosome biogenesis [BR:
pvz03009
]
Prokaryotic type
ribosomal protein modification factors
OA04_26050 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AVT59147
LinkDB
All DBs
Position
2836282..2837595
Genome browser
AA seq
437 aa
AA seq
DB search
MQQPRIGFVSLGCPKNLVDSERILTELRTEGYQVVPRYDDAELVIVNTCGFIDSAVQESL
EAIGEALNENGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEQVLSHVHQYVPKPTHNP
FTSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGSVLDEAKRLVDA
GVKELLVISQDTSAYGADVKQRTGFWNGQPVKTSMASLCEQLASLGVWVRLHYVYPYPHV
DDVIPLMAEGKILPYLDIPLQHASPKILKLMKRPGAVERTLERIKRWREICPDLTLRSTF
IVGFPGETEEDFQMLLDFLKEAKLDRVGCFKFSPVEGAAANELPDQVPEEVKEERFHRFM
QLQQAISTQRLQDKIGREVLVLIDEIDEEGAIGRSMADAPEIDGAVYLNGETGVKVGDIV
KVKVEHADEYDLWGSRV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaccacgtatcggctttgtttccctcggttgcccgaaaaacctcgtcgactcc
gagaggattctgaccgaactgcgtactgaaggttatcaggtcgtcccacgttatgacgac
gctgaactggtgatcgtcaatacctgtggttttattgacagcgccgtacaagagtcgctg
gaagccatcggcgaagcgctgaatgaaaacggtaaagtcatcgtaacgggctgtctgggt
gccaaagaaaaccaaatacgcgaagtgcatcccaaggttctggaaattaccggcccgcac
agctacgagcaagtactgtcacacgtccatcaatatgtccctaaaccgacgcacaacccg
tttaccagtctggttcccgagcagggagtcaaactcacgccgcgccattacgcgtatctg
aaaatttcagaaggctgtaaccaccgctgtacgttctgcatcatcccttctatgcgtggc
gatttggacagccgtccaatcggctcggtgttggatgaagcaaaacgtctggttgatgct
ggggtaaaagagctgctggtgatttctcaggatacctcagcgtacggcgcggatgtgaag
caacgtacgggtttctggaacggtcaaccggtcaaaaccagcatggccagcctgtgtgag
caactggcgtcgctgggcgtgtgggtgcgcctgcactatgtctacccttacccacatgta
gacgatgtcattccgttaatggcggaaggcaaaatcctgccttatctggacatcccactc
cagcacgccagcccgaaaattctcaagctgatgaagcgcccaggcgcggtagaaagaacg
ctggagcgcattaagcgctggcgcgaaatctgcccggacttaacgctgcgttctaccttt
attgtcggcttccctggcgaaacggaagaagacttccagatgctgctcgacttcctgaaa
gaagccaaacttgaccgcgtaggctgctttaaattcagtccggtcgaaggcgcagcggca
aatgaattgccagatcaggtgccggaggaggtcaaagaagagcgtttccatcgctttatg
caacttcagcaggcgatttccacccagcgtttgcaggataaaattggccgtgaagtgctg
gtgctgatcgatgaaatcgacgaagaaggcgcgattggccgcagcatggctgacgcccct
gaaattgatggcgcggtttacctgaacggcgaaactggcgtgaaagtcggtgacatcgtc
aaggtgaaggtcgagcacgcagacgagtacgatctgtggggtagccgcgtttaa
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