Pectobacterium parmentieri WPP163: Pecwa_3278
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Entry
Pecwa_3278 CDS
T01106
Name
(GenBank) thiamine biosynthesis/tRNA modification protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa00730
Thiamine metabolism
pwa01100
Metabolic pathways
pwa01240
Biosynthesis of cofactors
pwa04122
Sulfur relay system
Module
pwa_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Pecwa_3278
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Pecwa_3278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pwa03016
]
Pecwa_3278
Enzymes [BR:
pwa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
Pecwa_3278
Transfer RNA biogenesis [BR:
pwa03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Pecwa_3278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
ACX89020
LinkDB
All DBs
Position
complement(3578938..3580386)
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDHIEVRAKDESQR
GAIRDALTRIPGIHHILEVEDHAYTDVHNIFEQALVLYRERLEGKTFCVRVKRRGKHEFS
SQDVERYVGGGLNQHIETARVNLTAPQVTVHLEIEQDRLLLIKGRYEGIGGYPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVKQVAHYLWNRFGSSHRVRFI
AIDFDPVVGEILEKVDDGQMGVVLKRMMVRAASKIAERYGVQALVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIIKQARELGTEDFAKTMPEYCGVISKSPTVKAVKAKI
EAEEGHFDFAILDRVVSEARNIDIREIAEQTKQDVVEVETVASFAPTDVLLDIRAPDEQD
DKPLQLEQIEIKSLPFYKLGTQFGDLDQSKTYLLYCERGVMSRLQALYLREQGFSNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaagagccaatctgtgcggttg
cgctttatcaagattctaaccggaaacattcgcaacgtattaaaacactatgatgaaacg
ctggcggttgtccgtcactgggatcatatcgaagttcgggccaaagacgaaagccagcgt
ggagcgattcgtgatgcgctgacgagaattccgggtattcatcatattctggaagttgaa
gatcacgcctataccgacgtgcataacatctttgaacaggcgttggtgctgtatcgtgaa
cgtctggaaggcaagacgttttgtgtacgagtaaaacgccgcggtaagcatgagtttagt
tcacaagacgtggaacgctatgtcggcggcgggctgaatcagcacattgaaacggcgcga
gtcaatctcaccgctccgcaggtcactgtgcatctggaaatcgagcaggatcgtctgttg
ctgattaagggccgttatgaagggattggcggctatccgatcggtacgcaggaagatgta
ctgtcactcatttccggtggtttcgattccggtgtatccagctatatgttgatgcgccga
ggatgccgcgtgcattactgcttcttcaatcttggcggtgcagcacacgagattggtgtg
aaacaggtggcgcattatttgtggaaccggtttggtagttcacatcgggtgcgttttatt
gctattgatttcgatcccgttgttggtgaaattctggaaaaggtcgacgacgggcagatg
ggcgtcgtcttgaagcgcatgatggtgcgtgcggcctccaaaatagctgagcgttatggc
gttcaggcgttggtgactggcgaagcgctagggcaggtttccagccagacgctgactaac
ctgcgtttgatcgacaatgcttccgataccctgattttacgcccgctgatctctcatgat
aaagagcacattatcaaacaggctcgcgaactggggacggaagatttcgccaaaacgatg
ccggaatattgcggtgtaatctccaaaagcccgacggtgaaggccgtgaaagcgaagatt
gaggccgaggaaggccactttgactttgctattctggatcgcgtggtgagtgaagcgcga
aatattgatatccgtgagatcgccgagcagaccaagcaagacgtggttgaagtcgaaacg
gtcgcatcatttgcgccaactgacgtgctgctggatatccgcgcgccggatgaacaggac
gataagccgcttcaactggagcagatcgaaattaaatccttaccgttctacaagctgggt
acgcagtttggcgatttggatcagagtaaaacctatttgctttactgcgagcgcggcgtg
atgagccgtttgcaggcgttatatttgcgtgagcaaggtttcagcaatgtgaaggtatac
cgtccgtaa
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