Pectobacterium parmentieri WPP163: Pecwa_4238
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Entry
Pecwa_4238 CDS
T01106
Name
(GenBank) UbiD family decarboxylase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa00130
Ubiquinone and other terpenoid-quinone biosynthesis
pwa01100
Metabolic pathways
pwa01110
Biosynthesis of secondary metabolites
pwa01240
Biosynthesis of cofactors
Module
pwa_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
Pecwa_4238
Enzymes [BR:
pwa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
Pecwa_4238
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Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
ACX89962
LinkDB
All DBs
Position
complement(4683081..4684577)
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AA seq
498 aa
AA seq
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MNSMKYRDLREFLSLLEERGELKRITQPIDPYLEMTEIADRTLRAEGPALLFENPKGYDM
PVLCNLFGTPKRVALGMGQEEVSALRDVGKLLAFLKEPEPPKGFRDLVDKMPKFRQVLNM
PTKRLSSAPCQEQVWKGDDVDLRRIPVMQCWPEDAAPLITWGLTVTRGPHKERQNLGIYR
QQVLGKNKLIMRWLSHRGGALDFQEWCQENPGQRFPVAVALGADPATILGAVTPVPDTLS
EYAFAGLLRGHKTEVVKCLSSNLEVPASAEIVLEGYIEPGEMAAEGPYGDHTGYYNEVDH
FPVFTVTHITQRQNAIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIVDFYLPPEG
CSYRLAVVTMKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDVNARDWKDVIWAITTR
MDPARDTVLVENTPIDYLDFASPVSGLGSKMGLDATNKWPGETQREWGHPIKKDPQICAR
IDEIWDELAIFSDREPRR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcatgaaataccgtgacttacgcgaattcctctcactgctggaagagagaggg
gagttgaaacgcattacccagcccatcgatccctaccttgaaatgacggaaattgccgac
cggacgctgcgtgcggaaggtccagccctcctgtttgagaaccccaaaggctatgacatg
ccggtgctgtgcaatttatttggcacgccgaagcgtgttgcattgggaatgggacaggaa
gaggtcagcgcattgcgagacgttggcaagctgctggcatttttgaaagagccagagccg
cctaaggggttccgcgatctggtcgataaaatgccgaaattccgtcaggtactgaatatg
ccgacaaaacggctgtcttctgcgccgtgtcaggagcaggtctggaaaggcgatgatgtt
gatctgcgacgcattccagtgatgcagtgctggccggaagatgccgcgccgcttattacc
tggggactcaccgtgacgcgggggccgcataaagaacggcagaacctggggatctatcgc
cagcaggtgctgggtaaaaacaaactgatcatgcgctggctatctcatcgcggcggcgca
ctggattttcaggagtggtgtcaggaaaatccggggcagcgttttccagttgctgtcgcg
ctgggggctgacccagcgacgatcctcggtgcggtgacgcctgtgcctgacacgttgtca
gaatatgcctttgcgggcttattacgtgggcataagactgaagtggttaaatgtctgtcg
agcaatttggaagtccctgccagtgcggaaattgttctggaaggctatattgagccagga
gaaatggcggcagaggggccgtatggcgaccataccggctattacaatgaagtcgatcac
tttccagtctttaccgttacgcatattactcaacgccagaatgctatttatcactcgact
tacacagggcggccgccggatgagcctgcggtactgggcgtggcgctgaatgaagttttc
gtaccgatcctgcaaaagcagtttcctgagattgtcgacttttatttgccgccggagggt
tgctcttaccgtctggcggtcgttaccatgaagaaacagtacgcgggtcatgccaaacgc
gtcatgatgggcgtctggtcttttttacgccagttcatgtatacgaaatttgtcattgtc
tgcgatgatgacgttaacgcgcgtgattggaaagacgtgatatgggcgattaccacacgt
atggatccggctcgcgatacggtattagtggaaaatacgccgatagactatcttgatttc
gcttcgccggtttctggtctgggctcaaaaatgggtctggacgcgaccaataaatggcct
ggcgaaacgcagcgtgaatggggacaccccatcaagaaagacccgcagatttgcgcccgt
attgatgaaatatgggacgaattagccatttttagtgacagagagcctcggcgctaa
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