Pectobacterium parmentieri WPP163: Pecwa_4240
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Entry
Pecwa_4240 CDS
T01106
Name
(GenBank) Porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa00860
Porphyrin metabolism
pwa01100
Metabolic pathways
pwa01110
Biosynthesis of secondary metabolites
pwa01120
Microbial metabolism in diverse environments
pwa01240
Biosynthesis of cofactors
Module
pwa_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
pwa_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Pecwa_4240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pwa04147
]
Pecwa_4240
Enzymes [BR:
pwa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
Pecwa_4240
Exosome [BR:
pwa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Pecwa_4240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
ACX89964
LinkDB
All DBs
Position
complement(4685329..4686351)
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AA seq
340 aa
AA seq
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MSNAFPGTFPGRRMRRIRRHDFSRRLVAENQLTVNDLIYPVFVMEGTNHRQEVPSMPGVY
RMTVDVLLKEAEEIAKLGIPVLSLFPVVEADKKSLYAEEAYNPNGLVPRTIRALKDAVPE
LGLLTDVALDPYTTHGQDGIIDEEGYVINDVTKEILVRQALSHAEAGAEIIAPSDMMDGR
IGAIRDALEAQTLINTQIMAYSAKYASCYYGPFRDAVGSASNLKGGNKKTYQMDPANSDE
ALQEIAQDLQEGADMVMVKPGMPYLDVVRRVKETFGVPTFAYQVSGEYAMHMAAIQNGWL
QEQPVVMESLLCFKRAGADGVLTYFAKRVAQWLHDQNMQR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgcttttcccggcacgttccctggccgacgtatgcgtcgcatccgccgccat
gatttcagccgccgtcttgttgctgaaaatcaactgacggtgaatgatttgatttatccc
gttttcgtgatggaagggacaaatcatcgtcaggaagttccctcaatgccgggggtatac
cggatgactgtcgacgtgcttctgaaagaagccgaagagatcgctaagcttggcatcccg
gtgctgtcactgtttcccgttgttgaagcggataaaaaatcactctatgccgaagaagcc
tataatccgaatggcctggttccgcgcacgatccgcgcgttgaaagatgctgtccctgaa
ctgggtttgctgacggatgtggcgctcgatccctataccacacatgggcaggacggaatt
attgatgaagagggttatgtgattaatgacgtcaccaaagagattttggtgcgtcaggcg
ttgtctcacgccgaggctggggccgaaattattgcccccagcgacatgatggatggacgt
atcggggccatccgcgacgctcttgaggcgcagaccctgatcaatacccagatcatggcg
tattcagctaaatatgcatcgtgttattacggacctttccgtgatgccgtgggttcagcg
agtaatttgaaaggcggcaataagaaaacctaccagatggacccggccaacagcgatgaa
gccttgcaggaaattgcacaggatttgcaggaaggcgcggatatggtgatggtcaaaccg
gggatgccttacctggatgtggttcgtcgcgtcaaggagacgttcggcgtgccgacgttt
gcttatcaggtctctggtgagtatgcgatgcacatggctgcgattcagaacggttggttg
caggagcaaccggtggtgatggagtctctgttgtgctttaaacgcgcgggcgcagatggc
gtgctgacctattttgctaagcgtgtcgcacagtggctgcacgatcagaatatgcaacgc
taa
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