Pyrus x bretschneideri (Chinese white pear): 103936881
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Entry
103936881 CDS
T03446
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103936881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103936881
Enzymes [BR:
pxb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103936881
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
103936881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Peptidase_C101
BUD22
Motif
Other DBs
NCBI-GeneID:
103936881
NCBI-ProteinID:
XP_009345035
LinkDB
All DBs
Position
Unknown
AA seq
1684 aa
AA seq
DB search
MASSEVPTASTEAIKFAFLTDEEVRQHSFLRVTDPSLLTQLGNPVAGGLYDKALGPIDDK
PGESCGTCGEKSRNCPGHCGHIDLALPVYNPLLFNTLFKLLQRTCFFCYHFRTDQTHVEK
AVSQLKLIMEGDVVGAKMLDSDSPSEYLDCNEGDSHSDKHAKQQGWTSLQFTELMSVFDK
ALPKQGKDCNNCKAKNPKIIKPTFGCFQMSGAENARENVIRGCNLVGPLTGQDEGDENEN
VDNNDMEKHNGEGSKVPSEFLNQTTSLSGDLLPKQVQDIIKLLWDNEAEFCSFIGDIQCQ
GIGRKAGHSMFFLETVLVPPIKFRPPSKGGDSVMEHPQTVLLSKVVQANNSLQESVVTKS
DPSKTIRQWRDLQEYINVMYNSKTATGKGQKDADPGICQLLEKKEGLFRQKMMGKRVNYA
CRSVISPDPYLAVNEIGIPPYFATRLTYPERVTPWNVDKLRNAIVNGPEIHPGATQYVDK
SSVKMLRQNRRERISTARKLPSSKGLATQHGKGSDNSYENKVVFRHLRDGDIVLVNRQPT
LHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNAN
NQYVKPTSGDPIRALIQDHVISAVLLTKKDTFLRWEEFNQLLYSSCVSARRSDALSGKPD
QKVFMCNIEGTMQPLLPAIWKPERLWTGKQVVTALLNHITRGSPPVTVEKDAKIPRGFFN
CNLEEEKFDEEELQKKKKRSKGKQADECGSQNEKKPDKKVDNDKSKDTGVVDENSLLIYK
NNLVRGVIDKAQFGDYGLVHTVQELYGSDAAGILLSVLSRLFTVYLQMHGFTCGVDDLLV
MPSKDTKMKEQLESCEEIGEKVFRDFIEVEDDKRKDLVALQLNIEKFIRSNGESALAALD
RRMISQLNNKTSNSDVFKQLLLKGLSKPSVKNCIYLMTTSGAKGSVANLQQITSYLGQQE
LEGKRVPQMVSGKTLPCFHPWDWSSRSGGFIIDRFLTGLRPQEYYFHCMAGREGLVDTAV
KTSRSGYLQRCLIKNLECLKVCYDHTVRDADGSIVQFYYGEDGVDVHLTSFLQKFDSLAA
NKEMFQNKFHRQIDKSDPYIAELPSALKYKAEKFVLDLSLKEESHNLFSQVDFLKLMEHK
YLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAANEI
KTPVMTCPLRKGRSKEEAQHLANKLKKITVADIIESMEVTLLPFVLQGLETCRIYKLQMK
LHIPEHLQNIVQDISEDWEEILEVMFVRALEDAIQSHVLLLSKISGIKNVTDAPQKASNE
TDENISKSGHQHQEEDDDNDGADDGEGAEDFGMDAQKRKLQAFDEMDYEDGCEDEVRDGD
LTDGDEVENDADNDEENDVETGKDGAIEVVDATDEMPTSPLEEAGNLPKPKSKEKKNKSG
ATIKKKKIRAQLVRKDTDRSIFVSAKGFHFEIHFKFTDEPHILLAQIAQQTAQKVSMQRS
GSVDDCKQITCDENQVLLYGKDPENKQSYSSKEKKEMAALQTTGVDFRTFWKLQDVLDVR
YLYSNNIHAMLNTYGVEAARETIIREIMNVFKSYGISVNIRHLTLIADYMTHSGGYRPMN
RFGGIAESISPFNKMSFETASKFIVEAAYHGQTDDLETPSSRICLGLPVKVGTGCFDLMQ
KIEV
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcagaggttccgacggcgtccactgaggcgattaagtttgctttcttaact
gacgaggaggtgcgacagcacagctttctgagggttaccgacccatctctccttactcaa
ttaggaaaccccgtggccggtgggctatacgataaggcactcggcccaattgatgacaaa
cccggcgaaagttgcggaacatgtggtgagaagtcgcgtaattgcccgggtcattgtggt
catattgaccttgcgttgccagtttataatcccttgctgttcaatactcttttcaaactt
ctacaaagaacgtgtttcttctgctaccattttcggacagaccaaacacatgttgagaaa
gctgtttcccaattaaaactcataatggaaggtgacgtcgttggggctaaaatgttagat
tctgactcacctagtgaatacttagactgcaacgagggagatagtcacagtgacaagcat
gcaaagcagcaaggatggacttctcttcagtttacggagctaatgtctgtttttgataag
gctttgccgaaacaagggaaggactgcaacaattgcaaggcgaagaatcccaaaatcatc
aaacctacttttggatgttttcaaatgagtggtgctgaaaatgcgagagaaaatgttatc
agagggtgcaacctggtgggacccttaactggtcaagatgaaggggatgagaatgaaaat
gttgacaataatgatatggaaaagcacaatggagaaggaagcaaagtgccaagtgagttc
cttaatcagacaacttccttgtcgggagatctattaccaaaacaggttcaagacatcata
aagcttttgtgggacaatgaagctgagttctgctcttttattggtgatatccaatgccaa
ggaattggaagaaaagcaggtcactctatgtttttcttagagactgtacttgtgccacca
atcaaatttcgtcctccatccaagggtggtgattctgtgatggagcatcctcaaaccgtt
ttattaagtaaggtggtgcaggcaaataattctttgcaagagtctgttgttaccaagtct
gacccctcaaagacaattcggcagtggagggatcttcaagagtacataaatgtgatgtac
aatagcaaaactgctactggtaaaggtcaaaaagatgcggatcctggaatatgtcagttg
cttgagaagaaggaaggcctgttccggcagaaaatgatgggcaaacgggttaattatgca
tgtcggtctgtcatatccccagatccctatttagctgttaatgagattggaattcctccg
tattttgcaactagattaacatatcctgagagagttactccgtggaatgttgacaagttg
aggaatgcaattgtcaacggtcctgaaatccatcctggagctacacagtatgttgataag
tcctctgtgaagatgttgagacaaaaccggagagaacgcatttcaacagcaagaaaatta
ccttcttcaaaagggcttgctacacaacacggaaaaggatctgataatagctatgaaaac
aaagttgtttttcgtcacttgcgagatggggacattgtgcttgtcaatcgacagcctaca
cttcacaaacccagtataatggcgcatgtagttcgtgtattgaagggggagaaaacaatt
cgtatgcactatgcaaattgcagtacgtacaatgctgattttgatggtgatgaaatgaat
gttcattttccacaagatgaaatttctcgagcagaagcttacaatatcgtaaatgcaaat
aaccaatatgtaaagcctaccagcggtgatccaattagagccttgattcaggaccatgtc
ataagtgctgtcctccttacaaagaaggatacctttttgcgctgggaggaatttaatcag
cttctttatagttcatgtgtttcagcccgtcggtcagatgctttgtctggaaaaccagat
caaaaggttttcatgtgtaacattgaaggcacaatgcagccccttcttcctgctatttgg
aaaccagagcgtctttggactggaaaacaggtcgtcactgccttgctaaatcatattact
aggggttctccgccagttactgtagaaaaggatgcaaaaatcccacgtggtttttttaac
tgtaatcttgaagaagagaaatttgatgaagaggaactacagaaaaagaagaaacgaagc
aaaggaaaacaagctgatgaatgtggatcacagaatgagaagaaaccagacaaaaaagta
gataacgataaatcaaaggacacaggggttgtagatgagaacagtttattaatctataaa
aacaatttggtgcgcggtgtgattgacaaggctcagtttggtgattatggtttggtccat
acagtgcaggagctctatggctcagatgctgcaggaatattgctttctgtattgagtcgt
ttgtttactgtttatttgcagatgcatgggttcacatgtggtgttgatgatcttctggta
atgccgagcaaagacacaaaaatgaaggaacaacttgaaagttgtgaagagattggtgaa
aaagttttccgtgattttatcgaagtcgaagatgataaaagaaaagatctagtggcactg
caattgaacattgaaaaatttatacggagtaatggagaatctgccttggcagccttggat
aggagaatgattagtcagcttaataacaagacctccaactctgacgtcttcaaacaatta
ttgttgaaagggttatcaaaaccgtccgttaagaattgtatctatcttatgaccacatct
ggggctaaaggtagtgtggccaacctccaacaaataacttcgtatttgggtcagcaagag
ctagaaggcaaacgggtgcctcaaatggtttctggaaagaccttaccgtgctttcaccca
tgggattggtcatctcgatctggaggctttattattgatcgttttcttactggtcttcgg
cctcaggagtattattttcattgcatggctggtcgtgaagggttggttgatacggctgtc
aaaacatctcgtagtgggtacctgcaaaggtgcctaataaaaaatcttgagtgcctaaaa
gtttgttatgaccataccgtccgtgatgctgacggttccattgttcaattttattatgga
gaagatggtgttgatgtccatttgacaagcttcctacaaaaatttgactccctggcagct
aataaagaaatgttccagaacaaattccatcgacaaatcgacaaatccgatccttacatt
gctgagctgccttcagctctcaagtataaagcagagaagttcgtgcttgatttgtccttg
aaggaggaaagtcataacttattcagccaagtggatttcttgaagttaatggagcataaa
tacctctctagtcttgctcaacctggagaaccagttggtgttcttgctgctcagtcagta
ggagaaccgtcaactcagatgacactgaatactttccatcttgctggaagaggtgaaatg
aatgtgacacttggaatccctcgtcttcaagaaatcttgatgactgctgcaaatgagatt
aagactccggtcatgacatgtccattgcgaaaggggagatcaaaggaggaagctcagcat
ctagctaataagttgaagaagatcactgtggcagacataatagagagtatggaagttacg
ttgttgccatttgtccttcagggtcttgaaacttgccgtatttataaacttcaaatgaaa
ctccacatacctgaacatcttcaaaacatcgttcaagatatatcagaagattgggaggaa
atcctagaggttatgtttgttagggcgttggaagatgccatacaaagtcatgtgctcttg
ctttccaaaattagtggtataaaaaatgtcactgatgcaccacaaaaggcatcaaatgag
acggatgaaaatatttctaaaagcggacatcaacatcaggaagaagacgatgacaatgat
ggtgcagacgatggtgaaggggccgaggattttggtatggatgcacaaaagcgaaagctt
caagcttttgatgagatggattatgaagatggatgtgaagatgaagtgagagatggagat
ctgacagatggagatgaagtcgaaaatgatgcggataatgatgaggagaatgatgttgaa
actggtaaggatggtgcaattgaggttgtagatgctactgatgaaatgcctacaagtcct
ttagaagaggctggaaacctgcctaagcccaagtcaaaggagaaaaagaacaaatcagga
gccacaattaaaaagaaaaagatcagagctcagttagtaagaaaagacaccgacaggtca
atatttgtgtcagcgaaggggttccactttgagatccattttaaatttaccgatgaacct
catattttgctggctcagattgctcagcagacagcccagaaggtttctatgcaaagatct
ggcagtgttgatgactgtaaacaaataacttgtgacgaaaatcaagtcctcttatacgga
aaggatcctgagaataaacaaagttattcatccaaggaaaaaaaggagatggcagcactg
cagactactggagtggatttccgtacattttggaaattgcaagatgttcttgatgtcagg
tatttatattccaacaacatacatgctatgctgaacacttacggagttgaagccgccagg
gaaactatcatcagagaaattatgaacgttttcaagtcttacgggatatcagtcaacatt
aggcaccttacgcttatagctgactacatgactcactcgggtggttatcgaccaatgaat
agatttggaggcatagcagagtcgatatctccgtttaataaaatgtcttttgagacagct
tctaagttcattgtcgaagcagcatatcacgggcagacagatgacttggaaacgccatcc
tcgaggatctgtcttggattgccagtcaaggtaggcactggatgttttgatttgatgcag
aagatagaggtttag
DBGET
integrated database retrieval system
