KEGG T03446: 103942049

Pyrus x bretschneideri (Chinese white pear): 103942049

Entry

103942049         CDS       T03446

Name

(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like

K03011

DNA-directed RNA polymerase II subunit RPB3

Organism

pxb Pyrus x bretschneideri (Chinese white pear)

Pathway

pxb03020

RNA polymerase

pxb03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:pxb00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103942049
  09124 Replication and repair
   03420 Nucleotide excision repair
    103942049
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pxb03021]
    103942049
   03400 DNA repair and recombination proteins [BR:pxb03400]
    103942049
Transcription machinery [BR:pxb03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     103942049
DNA repair and recombination proteins [BR:pxb03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103942049

SSDB

Motif

Pfam:

RNA_pol_L RNA_pol_A_bac Pro_Al_protease

Other DBs

NCBI-GeneID:

103942049

NCBI-ProteinID:

XP_009350515

LinkDB

Position

Unknown

AA seq 318 aa
MEGKSYQRLPRVKIREMRDDSLKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSS
VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV
TSKDLLSSDHTVVPVDFSDSSGFESSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKWS
PAATVTFMYEPDIRINEELMDTLTLEEKKAWVESSPTKVFDIDPKTDKVVVVDAEAYTYD
DEVIKKAEAMGKSGLVDITAREDSFIFTVESTGAIKAAQLLLNAIEVLKQKLDAVRLSED
TVEADDQFGELGAHMRGG

NT seq 957 nt +upstreamnt +downstreamnt
atggaaggtaaatcgtaccagagactcccgcgcgtcaaaatccgcgaaatgcgtgacgac
tccttgaagttcgagctccgcgacactgacgccagcgtcgccaacgcgctacggcgcgtg
atgatcgccgaggtccccactgtcgccatcgatctcgtcgagatcgagatcaactcctcc
gtcctcaacgacgagttcattgcccaccgactcggcctcatccccctcacctccgaccgg
gccatgagcatgcgcttctcacgtgactgcgacgcctgcgacggcgacggacagtgcgag
ttctgctccgtcgagtttcacctccgcgccaagtgccactccgaccaaaccctagatgtc
accagcaaggacctcctcagctccgaccacaccgtggtccccgttgatttctctgattcc
tccggcttcgaatcctccgagcagaagggaattatcattgtgaagttgcgaagggggcaa
gagctgaggctgagggccattgccagaaaggggattggcaaagatcatgctaagtggtcg
cccgcggccactgtcactttcatgtatgaacctgacattcgaatcaatgaggagctgatg
gatactttgactcttgaggagaagaaggcttgggttgagagtagtcccaccaaggtcttt
gacattgatcctaaaaccgacaaggtcgtggtggttgatgctgaagcatacacctatgat
gatgaagtgatcaagaaagcagaagctatggggaagtctgggcttgtggatatcactgca
agagaagatagctttatattcacagtggaatctaccggtgctattaaagctgctcagttg
ctcctcaatgctatagaagtcctgaaacagaagctggacgcagtgcgcctttctgaggat
actgtagaagctgatgaccagtttggtgaattaggtgcacatatgcgaggaggatga

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