Pyrus x bretschneideri (Chinese white pear): 103942286
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Entry
103942286 CDS
T03446
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103942286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103942286
Enzymes [BR:
pxb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103942286
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
103942286
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
DUF321
Motif
Other DBs
NCBI-GeneID:
103942286
NCBI-ProteinID:
XP_009350748
LinkDB
All DBs
Position
Unknown
AA seq
1247 aa
AA seq
DB search
MAPAPTDTNWSVEYDTLRRENLFKNPPKDHTAYPTLAESIKPHIDSFNQLFGGSKILEEG
LKDIGTKSFLDGEIETPEQKKARIAEGRRAPKRNRLNVRVTEIFLDKPTLPPTNKFSHKN
RNIYPSECRERHSTYRGKLRARLEYQINNGDWIESVRELGQVPIMMRTNRCHLENASPQD
LVTYKEESEELGGYFIVNGNEKLIRMLIVGKRNYPMSIVRGSFVKRGHTYTKFGVQIRSV
RPDQTSQTNVLHYLSDGNVTFRFSWRKNEFLVPVMMILKALVETNDREIFETLVGSATSK
GMKNTFVTDRVELLLRTYQAYNKHSRYDCRAHLGKCFRPVLGVPADMSDEDVGTEFLRKV
VLPHLGNHNVTETQDYDKFKMIIFMIRKLYALVAGDCAPDNPDAVSNQEILLGGFLYGMI
LKERIEEWLRSFGPIARDWSIRNGGAKFSDPAFEREFLAKIVKRSNENIGNALEYFLSTG
NLVSPTGLDLQQTSGYTVIAEKINFYRFISHFRMIHRGSFFAQLKTTTVRKLLPESWGFL
CPVHTPDGSPCGLLNHLAHKCLIATDNLDVSHLPKILVQLGVRAESSVAIDDSVVIQLDG
RIIGFCSPKQAKQIHDTLRYWKVSGLNGIPRGLEIGYVPNSNGGQYPGIYMFSQAARMYR
PVKYLANEGMDFVGPFEQPFMEIACLESDLIAGLSTHIEYTPTNILSIVANMTPFSDYNQ
SPRNMYQCQMSKQTMGTPGTSINYRTDNKLYRLQTGQTPVVRPPLYNAYGLDNFPNGTNA
IVAIISYTGYDMDDAMIINKSSHERGFGHGTIYKTKVHSLAERDSRRSKSRREVTKLFGF
APGDEVRAEVKALIDSDGMPHVGVRVKEGDKIAAYHNVRYDAATDSFVNVDGITHFIKYK
DAEAGFIESIRIMGSENGNEPAQSLSVKYRIPRKPVIGDKFSSRHGQKGVCSQLWPAVDM
PFSESGMQPDLIINPHAFPSRMTIAQMIESMAGKAGALHGHPQDCTPFQFSEENTATDYF
GHQLLKAGYNYYGNEPLYSGITGREFAADIYMGVVYYQRLRHMVNDKFQVRTTGPVNALT
GQPVKGRAKGGGIRVGEMERDSLIAHGAAFLLQDRLMNCSDSQHAWICRDCGSFLSTQVA
VSGSGASRRAXXXXXAAAAAKVAPNQNLGGAATTVGALGGTNGIVRCRRCARSATFEDSR
AEAWEDGDGQRYVGGDNVTVVAVPGVLRFLDVELAAMGIRMKFKIEN
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggcacccgcgcctacggacaccaattggtcggttgaatacgacactttgcggcgtgag
aaccttttcaaaaatccgcccaaggaccataccgcctatccgacattggccgagtccatc
aagccgcatatcgactcgttcaaccaacttttcggtggaagcaagattctggaggaagga
ttgaaggatatcggcacaaaatcattcctggatggagaaattgagactcccgaacaaaag
aaggcccgtattgccgaaggccgtagagcgcctaagcgcaaccgtctgaatgtgcgggtc
accgagatcttcctcgacaagcccaccctcccacccaccaacaagtttagccacaagaac
cggaacatttacccttcggagtgccgcgagcggcattcgacctatcgtgggaagcttcgt
gcacgtctcgagtaccaaatcaacaatggcgactggatcgaatccgtgcgcgagttgggt
caggtccctatcatgatgcgcacgaaccgctgtcatctcgagaacgcatccccgcaagat
cttgtcacatacaaggaagagtcggaggagctgggtggatatttcattgtcaacggtaac
gagaagctgatccgaatgttgatcgtcggcaagcgcaactaccccatgtccatcgtccgt
ggctcatttgtcaaacgtggtcacacttataccaagttcggtgtgcaaatacgatccgtt
cgaccagatcagacctcgcaaacgaacgtcctgcactacctctccgatggcaacgtcact
ttccgcttctcctggcgtaaaaacgaattcctcgtccccgtcatgatgattctcaaggcg
ttggtagagaccaatgaccgtgagatcttcgaaactcttgtcggcagtgccacttccaag
ggcatgaagaacacattcgtcactgatcgtgtcgagcttttgctgcgaacttatcaagcc
tacaacaagcacagtcgatacgattgccgggctcatctgggcaagtgtttccgacccgtc
cttggcgtgccagccgacatgtcggacgaggatgtgggtacggaattccttcgcaaggtt
gttctgccccacttgggcaaccacaatgtcaccgagacccaggattacgacaaattcaag
atgatcatcttcatgatccggaaactgtacgccttggtggccggtgactgtgctcccgac
aatcccgatgcagtctccaaccaggaaattctgctgggtggcttcctctatggcatgatt
ctcaaagagcgtattgaagagtggctgcgctcatttggtcccattgcccgtgactggtcg
attcgcaatggcggtgccaagttctcggatcctgcgttcgagcgcgagttcctggcgaag
atcgtcaagcggtccaacgagaacattggtaatgctctggagtatttcctctccactggt
aacctggtgtctcctaccggtcttgacttgcagcagacgtctggttacaccgtcattgcc
gaaaagatcaacttctatcgtttcatcagtcacttccgcatgatccatcgtggtagtttc
ttcgcgcagctcaagaccacgacggtgcgtaagctgcttcccgagagttggggcttcctt
tgccccgttcacactcccgatggttctccctgtggtctgctcaaccacctggctcacaag
tgtctcattgccacggacaacctcgacgtctcacacctccccaaaattcttgttcagctg
ggtgtcagagccgagtcctccgttgctatcgatgacagcgtggtcattcaattggatggt
cgcatcatcgggttctgctcaccgaagcaggccaagcagatccacgacactctgcgatac
tggaaggtctccgggttgaatggtatcccccgtgggcttgagatcggatatgttcccaac
tcgaacggtggtcagtaccctggtatctacatgttctcacaggctgctcgtatgtaccgc
ccggtgaagtatcttgccaacgagggaatggactttgtgggtccctttgagcaaccattc
atggagattgcctgtttggagtccgacttgattgcgggattgtcgacccacattgaatac
acgccgaccaacatcctctcaattgtggccaacatgactcccttctccgactacaaccag
tcgccccgtaacatgtaccagtgtcagatgagcaagcagaccatgggtacccccggcaca
tctatcaactaccgcacagacaacaagctgtatcgcttgcaaaccggtcagactcccgtc
gtgcggccccctctgtacaacgcctatgggttggataacttccccaacggtacgaacgcg
attgtggccatcatctcctacactggctacgacatggacgacgccatgatcatcaacaaa
tcctcacacgagcgtggcttcggacacggaaccatctacaagaccaaggtgcacagtctg
gccgagcgtgactcgcggcgcagcaaatcgcgacgcgaggtgacgaagctctttggattc
gcgcctggtgacgaggttcgcgcggaggtcaaggccctgattgatagtgatggtatgcct
cacgtcggtgtgcgtgtgaaggaaggggacaaaattgctgcctatcacaacgtccgctac
gacgcagccaccgactcgtttgtcaatgtggacggaattacccacttcatcaagtacaag
gacgccgaagccggattcatcgagagcatccggatcatgggttcggaaaacggcaatgag
cccgctcaatcgctcagtgtgaagtaccgcatcccacgtaagcccgtcattggtgacaaa
ttctcctcccgtcacggtcagaagggtgtttgctcacaactctggcccgctgttgatatg
cccttctcggaaagcggcatgcagcctgatctgattatcaaccctcacgctttcccttct
cgtatgactatcgctcagatgatcgaatctatggccggtaaggccggtgcacttcacggc
cacccccaggattgcacgccattccaattctccgaagagaacactgcaaccgactacttc
ggccaccaactgctcaaggctgggtacaactattatggcaacgagcctttgtacagtggc
atcacgggtcgcgagtttgctgctgatatctacatgggtgttgtgtactaccagcgtctg
cgtcacatggtcaacgacaagttccaggtgcgcacgacgggtcccgtcaacgccctgacc
ggtcagcccgtcaagggtcgtgccaagggtggtggtatccgtgtgggagagatggagcgc
gactcgctcattgcccacggtgctgccttccttttgcaggatcgtctgatgaactgctcg
gactcccagcatgcctggatctgccgtgactgtggttctttcctctccacgcaagtcgcg
gtctcaggttctggcgcctcccgccgtgcnnnnnnnnnnnnnnnngcggcggcagcggcc
aaggtggcccccaatcagaacttgggtggcgcagctacaaccgtgggcgctctgggtggt
acgaacggcattgtgcgctgccgtcgctgtgcccgttcggccacctttgaagactcgcgt
gcggaagcctgggaagatggagatggccagcgctacgtcggtggtgacaatgtcactgtg
gttgctgtgcctggcgtactgcgcttcctcgatgtcgagttggcggcaatgggtatccgc
atgaagttcaagattgagaactaa
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integrated database retrieval system
