Pyrus x bretschneideri (Chinese white pear): 103946321
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Entry
103946321 CDS
T03446
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103946321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103946321
Enzymes [BR:
pxb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103946321
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
103946321
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
GxGYxYP_N
MpPF1
Motif
Other DBs
NCBI-GeneID:
103946321
NCBI-ProteinID:
XP_009355260
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MTSSEREEKPTKIFGKQLAAGEDFAAVRELFRHHIESFDYLVTKGLEVLLSKIKPIEIVD
PSTNNTLTIWLGDPALYRPYKEESKMMQVPLLPFECRQAKLSYTGKFMAEVCFKYNDSGA
VIREKFNFGQLPIMLQSKLCHLRGATPQKLVSYKEEASEMGGYFILNGLERVVRLVILPK
RNYPTSMVRNSFRDRKEGYTDKAVVIRCEREDQSSVTVKLYYLRNGSARLGFWIQGREYL
LPVGVVLKALIDTTDREIYECLTCCYVENYEKGKGAVGTQLVGERAQIILDEVRDLKLFT
RHECLEHIGEHFRPLMGGLENERPSVVGDAVIMNYILVHLNKAHDKFNLLIFMVQKLFSL
VDQTSVPDNPDSLQNHEVLLPGHLITIYIKEKLEEWLQRTKKLIEDEINKNKDFEFGNIA
KVKKLMDKNPAKQISLAVENMLKTGRLNTQSGLDLQQRAGLTVQAERLNYLRFISHFRAV
HRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTHICRITSFFDAQGNIRD
FSKIRESILSVLSAVGMKTSKPNLVQAGPPAAFSVLLDGCVVGSISSSKVEKVVAHLRRL
KVAAAPVIPDDLEVGYVPLSMGGAYPGLYLFTIPSRFVRPVKNISIPSVEGQNIELIGPF
EQVFMEIRCPDGRDGGRKDGFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAK
QTMAFSLQGLCNRADQKLYHLQTPQSPIVRTSAYKKYCIDEYPTGTNAIVAVLSYTGYDM
EDAMILNKSSVERGMFHGHIYQTETIDLSDQKKRSDNTPTYFKKSNVDKNPLIDSDGLPH
VGQTIKPYEEYYSFTNDTLHKPRAVKRKGTEPVIVDYVAIDGKKLLQKANIRFRHTRNPI
IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKG
GSLHGKYVDATPFASSKNANGETGPKSKTLVDELGEMLKVKGFNYHGVEVLYSGVYGTEL
TCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAH
GAAYLLHDRLHTCSDYHIADVCSICGSILTSTFIQPKRVGRAVSGIPSVRAPKKVICHAC
KTSKGMETVAMPYVFRYLAAELASMNIKMTLQVSNAAKD
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgtcggagagagaagagaagccgacgaagatattcgggaagcaattggcggcg
ggggaggacttcgcggcggtgcgtgagctcttccgccaccacatagagtcattcgactac
cttgtcactaagggtctcgaggttctactcagcaagatcaagcccatcgaaatcgtcgac
ccttcaaccaacaatacgcttacaatctggttgggtgaccctgcgttgtaccgaccttat
aaggaagagtcgaaaatgatgcaagttcctctgctgccttttgaatgtagacaagctaaa
ctttcctacacggggaaattcatggcggaagtttgctttaagtataatgatagtggagct
gttataagagaaaagttcaattttgggcagcttcccatcatgctacagtcaaagctttgc
cacttaagaggtgctactccccaaaagctagtttcttacaaagaagaggcatcggaaatg
ggtggttatttcattttaaatgggcttgagagagtggttcggcttgttatattgccaaag
cggaactatccaactagtatggtgcgaaattcatttcgtgatcgaaaggaaggatatact
gacaaagcagttgtaataagatgtgaaagagaagatcagtcttcagtaactgtcaaattg
tattaccttcgtaatggaagtgcaagactgggattttggatacaagggagggagtacttg
cttccggtaggcgttgtcttaaaggctctcattgatactactgatcgtgaaatttatgag
tgtttgacatgttgttatgtcgagaactacgagaaaggaaaaggggctgttggcactcag
ctagtgggtgagagggcacaaattatcctggatgaagtgagagacttgaaacttttcact
cgtcatgaatgtctagagcacattggagaacacttccgacctcttatgggtggattggag
aatgaacgaccttcggttgttggggatgctgttataatgaattacatattggtccacctt
aataaggctcatgacaaattcaatctgctcatatttatggtgcagaaacttttttcactt
gtggatcagacttctgtgccggacaacccagattccttgcaaaatcatgaagtcctactc
cctggtcacttgattacaatatatattaaggaaaaactagaagagtggttgcaaaggacg
aaaaagcttattgaagatgagatcaacaaaaataaggactttgaatttggcaacatagct
aaagtaaagaagcttatggataaaaatcctgcaaagcagatcagtttagctgttgaaaat
atgttgaaaactggaagacttaatactcaatctggtctagatttgcagcagagggcaggc
ttgacggttcaggcagagaggcttaactatttacgcttcatatctcattttcgtgctgtt
catcgaggggcatcattcgctggacttcgcaccacaagtgtgcggaaattgctacctgaa
tcttggggttttctttgccctgtccatacacctgatggtgaaccatgtggcttgttgaat
catatgactcacatttgtaggattacatccttctttgatgctcaaggaaatattagagac
ttctcaaagatccgagagtctattctcagtgttctgagtgcagttggaatgaagacttca
aagccaaatctggttcaagctggtcctcctgcagctttttctgttttgttagacggctgt
gttgttggttctatatcttccagtaaagttgagaaagttgtggctcatttaaggaggctg
aaagtggcagctgctccagtgattcctgacgatctggaagtgggatatgttccattaagc
atgggtggggcatatcctggtctgtaccttttcactatcccttctagatttgttcggcca
gtaaagaatatttcaattccttctgttgaaggtcagaatattgaacttattggacccttt
gaacaggttttcatggaaataagatgtcctgatggtcgagatggtggaaggaaagatggt
ttcccagcaactcatgaagaaattcatccaactggaatgctcagtgtggtcgctaatctt
acaccctggtcagatcataatcagagcccacgaaatatgtatcagtgccagatggcaaaa
caaacaatggccttctctttacaaggactttgtaatcgtgcagatcaaaagttgtaccat
cttcagactcctcagtcccctattgtacgcacaagtgcatataagaagtactgcatcgat
gaatacccaacaggcacaaatgcgatcgttgctgtactgtcatatactggatatgatatg
gaggatgctatgattctaaataagtcatctgttgaacgtggaatgtttcatgggcatata
tatcagacagaaacaatagacttgtctgatcaaaagaagaggtcagataacaccccaaca
tattttaagaaaagtaacgtcgataaaaatcccttgattgattcagatggtcttcctcat
gttggtcagacaataaaaccatatgaagaatattatagctttacgaatgacactcttcat
aagcccagagccgtcaaacggaaaggtacagaacctgttatagttgactacgttgctatt
gatgggaagaagctcctccagaaggcaaacatacgctttcgacacactagaaaccccatc
attggtgataaatttagcagccggcatgggcaaaaaggtgtttgctcccagttgtggcct
gatattgatatgccattttctggggttacgggaatgcgtccagatctaatcatcaatccc
catgcatttccttctagaatgacaatagctatgctgttggaatcagttgctgcaaagggc
ggtagcttacatggaaaatatgttgacgcgactccatttgccagttcaaagaatgctaat
ggagagactggaccaaaatccaaaacccttgttgacgaacttggtgaaatgttaaaggtt
aaggggtttaactaccatggtgtagaagttctgtacagcggggtttatggcacagaactc
acatgcgagatctttattggccctgtttattatcaacgactacgacacatggtttcagac
aaatttcaggttcgctccactggaacagtagaccaggtcactcgccagcctatcaaagga
cgaaagcgaggtggtggcatacgttttggtgaaatggagcgcgactccatgcttgcgcat
ggggcagcatatctgttgcacgacaggcttcatacctgttctgattatcacattgccgat
gtatgttccatatgtggaagcatcctaacgtccacattcatccaaccaaaacgggttggg
cgtgcagtttcaggaattccgtctgtaagagctcccaagaaggtcatctgccatgcttgt
aagacaagcaaagggatggagacagttgcaatgccctatgtcttcagatatttagctgca
gagttggcatcaatgaacataaaaatgactcttcaggtaagtaatgcagcgaaagattga
DBGET
integrated database retrieval system
