Pseudomonas xantholysinigenes: HU772_018520
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Entry
HU772_018520 CDS
T07643
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pxn
Pseudomonas xantholysinigenes
Brite
KEGG Orthology (KO) [BR:
pxn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pxn03009
]
HU772_018520 (rimO)
Enzymes [BR:
pxn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HU772_018520 (rimO)
Ribosome biogenesis [BR:
pxn03009
]
Prokaryotic type
ribosomal protein modification factors
HU772_018520 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QXI37319
UniProt:
A0A9E6PUC8
LinkDB
All DBs
Position
4167860..4169191
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AA seq
443 aa
AA seq
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MSTTPATPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYEDADVVVVNTCGFIDSAK
AESLEVIGEAIKENGKVIVTGCMGVEEGNIRDVHPSVLSVSGPQQYEQVVNAVHEVVPPR
QDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGEVLSEAE
RLVKAGVKEILVISQDTSAYGVDVKYKTDFWNGRPVKTRMLELCEALSSLGAWVRLHYVY
PYPNVDDVIPLMAAGKILPYLDIPFQHASPKVLKSMKRPAFEDRTLARIKNWREQCPELV
IRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLEEVPDDVKQA
RWDRFMAHQQAISAARLQQRIGKEIEVLIDEVEEQGSVGRSFFDAPEIDGSVFIDGNHGF
KPGDKVRCRVVDADEYDMWAEPI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactcccgccactcccaaggtaggctttgtcagtctgggttgcccaaaggcc
ctggtcgattccgagcgcatcctcacccagctgcgcatggaaggctatgaagtcgtgccc
acctacgaggacgccgacgtggtggtggtcaacacctgcggcttcatcgacagcgccaag
gccgagtcgctggaggtgatcggcgaggcgatcaaggagaacggcaaggtcatcgtcacc
ggctgcatgggtgtcgaggaaggcaatatccgcgacgtgcaccccagcgtgctgtcggtc
agcggcccacagcagtacgagcaggtggtcaacgccgtgcacgaggtggtgccaccgcgt
caggaccacaacccgctgatcgacctggtgccgccgcagggcgtcaagctgaccccgcgc
cactacgcctacctgaagatttccgaaggctgcaaccacagctgcagcttctgcatcatc
ccgtcgatgcgcggcaagctggtcagccgcccggtcggcgaagtgctgagcgaggccgag
cgcctggtcaaggccggcgtcaaggagatcctggtgatttcccaggacaccagcgcctat
ggcgtcgacgtcaagtacaagaccgacttctggaacggccgcccggtcaagacccgcatg
ctcgagctgtgcgaggccctgagcagcctgggtgcctgggtgcgcctgcactatgtgtac
ccgtatccgaacgtcgacgacgtgatcccgctgatggccgccggcaagatcctgccttac
ctggacattccgttccagcacgccagccccaaggtgctcaagtcgatgaagcgcccggcc
ttcgaagaccgcaccctggcgcgcatcaagaactggcgcgagcaatgccctgaactggtg
atccgctcgaccttcatcgtcggcttcccgggcgagaccgaagaggacttccagtacctg
ctcgactggctgaccgaagcccagctcgaccgcgttggctgcttccagtactcgccggtc
gaaggcgccccggccaacgacttgggcctggaagaagtaccggatgacgtcaagcaggcg
cgctgggaccgcttcatggcccaccagcaggcgatcagcgccgcacgcctgcaacagcgc
atcggcaaggagatcgaagtgctcatcgacgaggtcgaggaacaaggttcggtcggccgc
agcttcttcgacgcgccagagatcgacggcagcgtgttcatcgacggcaaccatggcttc
aagccgggcgacaaagtgcgttgccgggtggtcgatgccgacgagtacgatatgtgggcc
gagcccatctga
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