Papilio xuthus (Asian swallowtail): 106119953
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Entry
106119953 CDS
T07456
Name
(RefSeq) protein CLP1 homolog isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pxu
Papilio xuthus (Asian swallowtail)
Pathway
pxu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pxu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106119953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxu03019
]
106119953
Enzymes [BR:
pxu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
106119953
Messenger RNA biogenesis [BR:
pxu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
106119953
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
CbiA
AAA_10
MMR_HSR1
nSTAND3
RsgA_GTPase
AAA_16
AAA_24
ATP_bind_1
AAA_35
AAA_21
Motif
Other DBs
NCBI-GeneID:
106119953
NCBI-ProteinID:
XP_013170539
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MTEVQLQEFKLEPNSELRFEVESKNEKVVLEVKSGYAELFGTELVKGKPYEFHTGAKVAV
FTWHGCIVELRGRTEVSYVAKETPMVIYLNVHAALEQQRVAAEQENTRGPVTMIVGPGDV
GKSTLTRLLLNYAVRMGRRPIYVDLDVGQGHISVPGTIGALLVERPASIEEGFSQQAPLV
YHFGHKSPEENIELYNTIVSRLAEVIAERCENNKKASTSGVIINTCGWIKGAGYKVLTHA
AQAFEVDVILVLDNERLYNELKRDMPKFVKVVYLPKSGGVAERSPAQRAEGRDARIREYF
YGRRTPYYPHSFDVKYSDLKIYKVGAPSLPDSCMPLGMRAEEALTKLVGVSPGPALQHRL
LAVSFAAEPDDQVPHCNLAGFVCVTAVDPERQTMTILSPQPRPLPTTVLLLSELQYMDNH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagttcagttgcaagaatttaaacttgagccaaattctgaacttcgttttgaa
gtagagtcaaaaaatgaaaaagtagttcttgaggttaaaagtggctacgctgagctgttt
gggacagagttggtgaaggggaagccatatgaatttcatacaggtgctaaggttgctgtg
tttacgtggcacggctgcatagtagagctcagaggcaggacagaagttagttatgtggcg
aaggagacgccaatggttatctatctaaatgttcatgcggcattggagcagcaaagggtt
gctgcagagcaagagaacacacggggccctgtcaccatgatcgtgggcccaggggatgtg
ggcaagtccacactcacacgtctgttgctcaactatgcggtgcggatgggccgcagacct
atttatgtggacctagatgttggccaaggtcacattagtgtcccagggactattggtgcg
ctccttgtggagcgtccggcgtccattgaagagggtttcagccagcaggccccgctggtg
taccactttggccacaagtctccagaagagaatatagagctctacaacacaattgtctcc
cggctggctgaggtcatcgctgagaggtgtgaaaataacaaaaaagcatcaacatcagga
gtgatcatcaatacctgtggctggatcaagggtgcgggctacaaggtgctcactcacgcc
gcacaggcattcgaggtggatgttatattagtgttggacaatgagagattatataatgaa
ctaaaacgagatatgcccaagtttgtgaaagtcgtgtatctgcccaaaagtggaggagtg
gcggagcggtcgccggcgcagcgcgcggaggggagggacgctcgcatccgggagtacttc
tacgggcgccgcacgccttactaccctcactccttcgacgtcaagtactcagacctcaag
atatataaggtgggggcgccgtctctgccggactcgtgcatgccgctgggcatgcgcgcg
gaggaggcgctcaccaagctggtgggcgtgtcccccgggcccgccctgcagcaccgcctg
ctcgccgtctccttcgccgccgagcccgacgaccaggtgccgcactgcaacctcgccggc
ttcgtctgcgtgactgcggtggaccctgagcggcagacgatgacgatcctgtccccgcag
ccgcggccgctgcccaccaccgtgctgctgctctccgagctgcagtacatggacaaccac
tag
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integrated database retrieval system
