Plutella xylostella (diamondback moth): 105390115
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Entry
105390115 CDS
T03915
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105390115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxy03021
]
105390115
Enzymes [BR:
pxy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105390115
Transcription machinery [BR:
pxy03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105390115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
SURF2
Nop14
Motif
Other DBs
NCBI-GeneID:
105390115
NCBI-ProteinID:
XP_011559659
LinkDB
All DBs
Position
8:complement(6894154..6900645)
Genome browser
AA seq
1656 aa
AA seq
DB search
MQKSAFSSVLSGVSSVDPDNVQFLMFSDEDIRKLSVAVITNTNSFDVLGNATTGGFYDLR
FGPTRERGELCGTCSNTLLYCPGHFGHIDLPVVVVNPLFIKTIYTLFRISCLKCCKIQMD
DRTKFILKLQLDLIDAGHVTAALDLENYCGEIASKKDPEKTHKVLRKYQKLLNVKDAVAE
TFHSKNTDVLRKRILNNHFKPMSLARNCMYCKSKIVKVNTSENKLMHNNTAEGAKGIKIL
MPDEIQAFCTKLAENDGEILSHCIPILKFSKTTPATNVFFMEIIPVPPPNVRPTNVLRGE
LLEHPQTNVYKSVLGTALVIRAILQVISAVDHEKAIDSLDQRPRAAYQSAYGKTPAEKLH
NTWQELQKNVNQILTCEGTSAGSTSRGLKQVLERKTGVIRMHMMGKRVNFAARSVITPDP
NVDIDEIGVPDAFATKLTYPVPVTQWNVEELRQMIINGPNKHPGAEKLEIENGRVILLPA
DSIQKRKSIAKRLLTPDEYKTSGLKIVHRHLINGDMLILNRQPSLHKPSMMAHRARILKG
EKTLRLHYANCKSYNADFDGDEMNAHFPQNEIARSEAYNIMSVRKQYLVPKDGTPLSGLI
QDHVISGVKMSLRGSFFNKTDYQQLVFQALANHKGQIKLLPPAILKPCMLWSGKQVLSTI
IINNIPKDKPYLSLTSKAKISAKAWQRVPERKWKAGGTPFADSNTMTEAEVVIKNGELLC
GVLDKTHYGATPYGLIHCMFELYGGDSSSALLSSFSKVFTYYLQWAGFTLGVKDILVVEK
ADKKRDDFICLVRQSGKIAAAKATELPLDVDDQQLKDTIAEMFVKDPKFRATLDRQYKSM
LDEYTNKINTACLVEGLLEKFPYNNLQLMVQSGAKGSTVNTMQISCLLGQIELEGKRPPL
MISGKSLPSFPPHDTSPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTSRSGYL
QRCLIKHLEGLSVGYDHTVRDSDGSVIQFAYGEDGLDVLKCQYLRKDQFEFLDINSKAVM
DESVIKKLKEDTDAKAITKAQKSIKKWKKRNGNPSQKIPISPFTEFCKVMKPEIELEEEP
DIKTRDPYYWELEKKWRELDEEERQQYAKGTCPEPIQSKQSPNFKLGVINEQLDGVIQKY
LKNRQDNLYTEYTQKDKFVEVMSAKYLASMADPGEPVGLLAAQSIGEPSTQMTLNTFHFA
GRGDMNVTLGIPRLREILMTASANLKTPNMDIPFLDVPDVKKKAEKLKLKLNRVTVSDVL
EKIDVSCEIVTKPERQLKTTMRFNFLPHKQYKSRYAVKPAQIIKHMQAKFFAFMFIVIRK
QAKATTGILWSADKQPRKKRSGADDDEDDEPVSVEKETDNIADSSDEEAANDDDDNTDAR
LRSRRAEEQEYEDPESEEEEKSDDEGFQDEDENTEKPDNETEEVEVVETEKVSEKDSQAM
ADVVRSVQDATNYTFDTKKHRWCELTVKFPISFLRLDLSQALREAAQKSVIHEVKNIRRA
ITDVDKDTVILRTEGINILQMFKHCDLLDLNRLYSNDIHAIANTYGIEAATKVIIKEIKN
VFNVYGITVDPRHLSLVSDYMTYNGRFEPMSRKGMEASSSPLQQMSFESSLTFLKEAVLN
AKHDQIRSSSSCLMMGQPCRSGTGAFSLQHFNKAIS
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtcagctttctcatcagttctgagtggggtgagctctgtcgaccccgacaat
gtgcagttcctcatgttcagtgatgaagacatcaggaagctcagtgtagccgtcatcacc
aacaccaactcctttgatgtcctcggcaatgccactaccgggggcttctacgaccttcgc
ttcggaccaactagggagagaggtgaactttgtggaacctgctcaaacacactgctctac
tgtccaggccattttggacacatagacttaccagttgtagttgtcaatccactattcata
aaaacaatatataccttgttcaggataagttgcctaaaatgctgcaaaatccagatggat
gaccggacaaagtttatactgaagctgcagctagacctgattgatgctggccatgtcacc
gcagcattggacttggagaactactgtggagaaatcgcttctaagaaagatccagaaaaa
actcataaagttctaagaaaatatcagaagctactcaatgttaaagatgcggtagctgaa
acatttcacagtaaaaacacagatgtgctgaggaaaagaatactgaacaatcacttcaaa
cctatgagcttggctagaaattgcatgtattgtaaaagtaaaatagtcaaagtgaatact
tcggaaaataaactcatgcacaataatacagcagaaggagctaaaggcattaaaatcttg
atgcctgatgagattcaagccttctgcaccaagctagctgaaaatgatggagagattcta
tcacactgtattcccatcttgaagttcagcaaaactactccagcaacaaatgtatttttc
atggaaataatacctgtcccccctcccaatgtgaggcccaccaatgtgctgcgcggagag
cttctagaacacccgcaaactaatgtctacaagtcagtgttgggtactgctctagtcata
cgagctatactgcaagtgatttctgctgttgaccatgaaaaggcaattgacagcttagat
caaaggccaagagcagcctaccagtctgcctatggcaagacaccagctgaaaagctacat
aatacttggcaagaattacagaagaatgtcaaccagatactcacttgtgaaggaacatct
gccggctccactagtcgtggcttgaagcaggtgctggagcgtaaaactggcgtcataaga
atgcacatgatgggcaagagagttaactttgcagcccgatctgttatcacaccagacccc
aatgtcgacattgatgagataggtgtgccagatgcattcgccactaagctaacataccct
gtcccagtaacacaatggaatgtggaggagctcaggcaaatgatcatcaacggccccaac
aaacaccctggagcagaaaaactagagattgaaaatggaagagttattttactgccagct
gattccatacaaaaacggaaaagtatagctaaaagactgcttacacccgatgagtacaag
acttctggattgaagattgtgcatagacatttaattaatggagatatgctcatactgaac
cgtcagccctctctgcacaagcccagtatgatggcacacagagctagaatcttaaagggc
gagaaaactctcagattacattatgctaactgcaaatcttacaatgccgattttgatgga
gatgaaatgaacgcacattttccacaaaatgagattgccaggagtgaagcctacaacatc
atgtcggtccgaaaacaataccttgttcctaaagacggaacccctttgagtggtctcatt
caggatcacgtcatttctggagtaaagatgtcgcttcgtggatcattcttcaacaaaact
gattaccaacagcttgttttccaagctttggccaatcacaagggccaaatcaagctgctg
cccccagctatactaaagccatgtatgctgtggtcaggcaaacaagtcttatcaactata
ataatcaataacatcccaaaagataagccttatctctcactaaccagcaaagcaaagatc
agtgcaaaagcgtggcaaagagtaccggagaggaagtggaaagctggcggcacgccattc
gctgactccaacacaatgactgaagctgaagttgtcattaagaacggtgaacttctatgt
ggggtgttagacaagacccactacggtgcgacaccctatggtttgatacactgcatgttt
gaattgtatggcggagatagctcgagcgctttactcagctcattttccaaggtatttaca
tactacctgcaatgggctggcttcactcttggtgtcaaagatattctggtcgtcgaaaaa
gctgacaagaaacgcgatgattttatctgtctcgtccgtcagtctggtaagatcgcggct
gcgaaagccacagaattgcccttggacgtggatgatcaacagttgaaagacaccatcgca
gaaatgtttgttaaagatccaaagttcagggcaacactggatcgtcaatacaaatcaatg
cttgatgagtataccaataaaatcaacacggcttgtttagtggaaggtctacttgaaaag
tttccctacaacaaccttcaactgatggtgcagtcaggtgccaaaggatccaccgtcaac
actatgcagatatcttgcttgttggggcaaatagagttggaaggaaagcggcctcctctc
atgatatcagggaagtcgttgccaagtttcccgccacacgacacatcgccgagggccggc
gggttcatcgacggccgcttcatgaccggcatccagccgcaagagttcttcttccactgc
atggctggaagagaaggtttgatcgatactgcggtcaagaccagtcgttccggttatctg
cagagatgcttgatcaaacatttggaaggcttgagtgtcggatacgatcacaccgtcaga
gactccgacggcagcgtgattcaattcgcatatggagaagatggacttgatgttcttaaa
tgccaatacctcaggaaggatcagtttgaattcctggacataaattcgaaggcagtcatg
gatgaatcagttattaaaaagctcaaagaagacacagacgctaaagccataacaaaagca
caaaagtcgataaagaagtggaaaaagaggaacggaaacccgtcacaaaaaatcccaatc
agccctttcactgagttctgtaaagtaatgaagccggagattgaactagaggaggaacca
gatatcaagacacgagacccatactactgggagctggagaagaaatggcgtgagttggac
gaagaagagagacagcaatacgctaaaggaacttgcccagaaccgatacagagtaaacaa
tcgccaaacttcaaattgggagttatcaatgagcagctcgatggcgtcatacagaagtat
cttaagaacaggcaagataacctttacacagagtatacccaaaaagacaaatttgttgaa
gtgatgagtgcgaagtatctagcgtcgatggctgaccctggggaaccagtagggctgcta
gctgcccagtctatcggagagccgtctactcagatgacactgaacacgttccactttgca
gggcgaggtgacatgaacgtcactctcggtattcctcgtctgcgagaaatattaatgaca
gcgtcagccaacctgaagacacccaacatggatattccattccttgacgtaccggacgtg
aaaaagaaggcggagaaattaaaattgaaactgaacagagtgaccgtttctgatgtgctg
gaaaagatcgatgtgagctgtgagatagtgacaaaaccggaacgccaactaaagactacc
atgaggtttaacttcttgccgcacaagcagtataagagtcggtacgctgtaaagccggcc
cagatcataaagcacatgcaggctaaattctttgcgtttatgttcatcgtgattcgaaag
caggctaaagcaacgactgggattctttggagtgcggacaagcagccgaggaagaagagg
tctggagctgatgatgatgaagatgatgaaccggtgtcagtcgagaaagagactgacaac
atcgctgacagctccgatgaggaagctgccaatgacgatgatgacaatactgatgcgaga
ctacgaagcaggcgagccgaggagcaagaatacgaagacccggaatctgaagaagaagag
aaatcagacgacgaaggattccaggatgaagacgaaaacacagagaaaccagacaacgaa
accgaagaagtggaagtcgtggaaacagaaaaagtgtcagagaaagacagccaggccatg
gctgacgtcgtgagatccgtgcaagacgccacaaactacaccttcgacacaaagaagcat
cgttggtgcgaactcacagtgaaattccccatctctttcctacgtctagacctgtcgcaa
gcgctcagagaagcggctcagaaatccgtcatacacgaggtgaagaatatacgtcgagcg
attaccgacgtcgacaaagatacggtgattctcagaactgagggcataaatatcttgcag
atgttcaaacactgtgacttgctcgacctgaacagactatacagcaacgacatccatgcg
atagcgaacacatacggcatagaagctgccaccaaagtgattataaaggagatcaagaat
gtgttcaatgtgtacggtatcacagtagacccgcgccatctatccctggtctccgactac
atgacgtataatggcaggtttgagccaatgagtaggaaagggatggaagcatcgtcctct
cctcttcagcagatgtcctttgagtcgtcactgacattcttgaaggaagcggtgctaaat
gccaaacatgaccagatcaggtcttcgtccagttgcctcatgatgggtcagccgtgtaga
agcggcactggagccttcagcttgcaacatttcaataaggctatttcgtaa
DBGET
integrated database retrieval system
