Pyrococcus yayanosii: PYCH_03890
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Entry
PYCH_03890 CDS
T01543
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
pya
Pyrococcus yayanosii
Pathway
pya03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pya00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PYCH_03890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pya03021
]
PYCH_03890
Enzymes [BR:
pya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PYCH_03890
Transcription machinery [BR:
pya03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
PYCH_03890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Auto_anti-p27
RUBY_RBDX
NOB1_Zn_bind
RNA_pol_Rpb2_45
DUF5816
OrfB_Zn_ribbon
TF_Zn_Ribbon
Motif
Other DBs
NCBI-ProteinID:
AEH24079
UniProt:
F8AH21
LinkDB
All DBs
Position
318860..322216
Genome browser
AA seq
1118 aa
AA seq
DB search
MRGPTVVEVTPDDLWVVMESYWQEKGLVRQHLDSYNAFIERGLQEVVNEFGGVKPDIPDF
EVKFGRIRVGEPEFQEAHGQRKPLYPMDARIRNLTYSAPLYLEMIPVVKGIEQEPVEVRI
GELPIMLKSKVCRLYGLSDEELIKLGEDPKDPGGYFIINGSERVIVSIEDIAPNRTLVEK
DERQERYLAKCFSYRHGYRALITVERRKDGILYVSIPNVPKPVKFVYVMRALGLEKDKDI
VDAVGNDPEVQQVLFDNLEDASDIQTQMEALELIGRLVAPGQAREYRLKRAEYVIDNNLL
PHMGVNPEDRIRKAYYLGMMALKVIELSLGRRDEDDKDHYANKRLRLAGDLLKDLFRVAF
AQLVKDIQYQMTKTYQRKGEKYTFGNIHRFIRNSIRPDVLTERIEHSLATGAWPGGRTGV
SQLLDRTNYMSTLSHLRRVTSPLDREQPHFEARDLHGTHWGRICPTETPEGPNCGLVKNL
ALMAQITTAVPEKEVREYLMKLGIIPIEVRRPSPELWRVYLNGVLIGTIEDGKALVERIK
KDRRSGKISDVINVAYYEDIKEVYVNSDDGRVRRPLIIVENGKPKLTREHVEAVKQGRLK
WSDLIKMGIIEYLDAEEEENAYVAMWPWEVTEEHTHLELMPAAILGLPASLVPYPEHNAA
PRNTYGAGMAKQSLGLGWANFRIRVDTRGHLLHYPQVPLVNSRIMKAVGYEDRPAGQNFV
VAILAYQGYNMEDAIIINKASIERGLARSTFFRTYEAEEKKYLGGQTDRFEIPDPTVRGY
RGEKYYRNLDEDGLIFPESKVDGKDVLIGRTSPPRFLEERGGLGGMILQERRETSVAVRP
SEKGIVDKVIITETGDGTKLVKVTVRDLRIPELGDKFASRHGQKGVIGLIVPQEDMPWTE
SGIVPDLIVNPHGIPSRMTVGQLIEAIGGKVASLKGRRVDGTAFIGEPEERLRKELEELG
FKHNGREVMYDGITGKRLVADIFIGVIYYQRLHHMVADKIHARSRGPVQVLTKQPTEGRA
REGGLRFGEMERDVLVGHGAAMLLIERLLEESDKTEVWVCENCGHIALEDKRRGKVYCPV
CGEEERISKVEMSYAFKLLLDELKAMIIRPKLNLTERV
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaggggacctacggttgtagaggttactcccgacgatctttgggttgttatggagagt
tattggcaggagaagggccttgtgaggcagcaccttgattcttacaacgccttcatcgaa
cgcggccttcaggaggtcgttaacgagttcggaggcgtcaagcccgacatccctgacttt
gaggtcaagttcggccgtataagggtcggtgagcccgagttccaggaggcccacggtcag
aggaagccactctaccctatggacgcgaggataaggaaccttacgtattccgcacccctg
tacctcgaaatgatacccgtggttaagggtatcgagcaggagcccgttgaggttcgcatt
ggtgaactcccaataatgctcaaatccaaggtctgccgcctctacggccttagcgatgag
gagctcatcaagctcggtgaagaccccaaggatccgggaggttacttcatcataaacggc
tctgagagggtcatcgtttctatcgaggacatagcccctaacaggacgctggtcgagaag
gacgagaggcaggagcgctacctagctaagtgcttctcctacaggcatggttaccgtgcc
cttatcacggtggagaggaggaaggacggcatactatacgtcagcatacccaacgttccc
aagcctgtcaagttcgtctacgttatgagagccctaggccttgagaaggataaggacatc
gtcgatgccgttggcaacgacccggaggttcagcaggttctctttgacaatcttgaagat
gccagcgacatacaaacgcagatggaggcccttgaactcatagggaggctcgtggcgccg
ggacaggcgagagagtacaggctgaaaagagcagaatacgtcatagacaacaacctcctt
ccgcacatgggtgtgaaccccgaggacagaataagaaaggcctactacctcggtatgatg
gccctcaaggtcatcgagctatccctcggcagaagagatgaggacgacaaggatcactac
gccaataagaggctccgtctcgccggagatctcctcaaggacctgttccgcgttgccttt
gctcagcttgtgaaggacatccagtaccagatgaccaagacctaccagaggaagggggag
aagtacacctttggtaacattcaccgcttcataaggaactccataaggcctgacgttctg
acggagaggattgaacattccctggcaactggggcttggcccggcgggaggacgggtgtc
agccaactccttgacaggaccaactacatgtccacgctctcccacctaaggcgcgtgacc
tctccactcgacagggagcagccccacttcgaggcccgtgacctgcacgggactcattgg
ggccgcatatgcccaacggagactccagagggtccgaactgtggtctcgtcaagaacctt
gcccttatggctcagataacgacggcggttcctgagaaggaggtcagggaatacttgatg
aagcttggcattatcccaatagaggtcaggaggcccagccccgagctctggcgtgtctac
ctcaacggcgtccttataggaaccattgaggatggaaaagcccttgtcgagaggataaag
aaggataggaggagcggaaagataagtgacgtcatcaatgttgcatactatgaggacatc
aaagaggtttacgtgaacagcgatgacggtcgtgtcaggaggccgcttataatagtggag
aacgggaagccaaagctcacgagggagcacgtggaggccgtgaaacagggcaggctcaag
tggagcgacctgataaagatgggcatcattgagtacctagacgctgaagaggaggagaac
gcttacgtcgctatgtggccgtgggaagtaactgaggagcacacccatctcgagctcatg
ccggcagccatacttggtcttcctgcttcgctcgttccgtatccggagcacaatgcggct
ccaagaaacacttacggtgcgggcatggccaagcagagccttgggcttgggtgggccaac
ttccgcataagggtggacacgaggggtcatctcctccactacccgcaggttccgctcgtt
aactcgaggataatgaaggccgttggttacgaggacaggcccgccggccagaacttcgtc
gttgccatccttgcctaccagggttacaacatggaagacgccattataataaacaaggcc
tccatagagcgtggccttgctcgctcgacgttcttcagaacctatgaggccgaggagaag
aagtacctcggaggtcagacagaccgcttcgaaatacctgacccgacagttaggggttac
aggggcgagaagtattaccgcaacctcgatgaggatggtcttatctttccagagtcgaag
gtcgatggcaaggacgttctcattggtagaacatctccgcccaggttcctcgaggagaga
ggtggcctcggtggcatgatacttcaagaaaggagagaaaccagcgtcgccgtcaggccg
agcgagaagggtatcgttgataaagtcataatcaccgagaccggcgacggaaccaagctc
gtcaaggtcaccgtcagggacctcaggattcccgagcttggagacaagttcgcgtcaagg
cacggtcagaagggtgttattggtctgatcgtcccgcaggaggatatgccttggaccgag
agcggaatcgtgccggatctcatagtcaacccgcacggtataccatcgagaatgaccgtt
ggacagctcatagaggcaataggtggaaaggtcgcctcgctgaagggaagaagagttgat
ggcacggccttcataggtgagcccgaggagaggcttaggaaggagctggaggagcttgga
ttcaagcacaacggtagggaagtcatgtacgacggcataaccggaaagaggcttgtggcc
gacatcttcatcggtgtcatctactaccagaggcttcaccacatggttgcagataagata
cacgcccgctcccgcggccctgtccaggtcctaaccaagcagcccactgagggaagggct
agggaaggcggcctcaggttcggtgagatggagcgtgacgtcttggtcggacatggagcg
gccatgttgctcatcgagcgtctcctggaggagagcgataagacagaagtctgggtctgc
gagaactgcggtcatatagcactcgaagacaagcggcgtggcaaggtatactgccccgtc
tgtggcgaggaggagagaattagcaaggtcgagatgagctatgccttcaagctgctcctt
gacgaactcaaggctatgattattaggcctaagctcaaccttacggagagggtgtga
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integrated database retrieval system
