Phormidium yuhuli: NEA10_10000
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Entry
NEA10_10000 CDS
T08410
Symbol
shc
Name
(GenBank) squalene--hopene cyclase
KO
K06045
squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:
5.4.99.17
4.2.1.129
]
Organism
pyh
Phormidium yuhuli
Pathway
pyh00909
Sesquiterpenoid and triterpenoid biosynthesis
pyh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pyh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
NEA10_10000 (shc)
Enzymes [BR:
pyh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.129 squalene---hopanol cyclase
NEA10_10000 (shc)
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.17 squalene---hopene cyclase
NEA10_10000 (shc)
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GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
TED_complement
Pec_lyase
Motif
Other DBs
NCBI-ProteinID:
USR93021
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Position
complement(2327028..2328950)
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AA seq
640 aa
AA seq
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MDRNRLQQAIQASQEYLLQQQQPEGYWWADLESNVTMLAEVILLHKIWQLEDRLPWGKAE
QFFRQQQQNHGGWELFRGDGGDLSTSVEAYLGLRLLGVPADDPALLKAKSFILAKGGISQ
TRVFTKMHLALIGAYDWRGVPSIPPWIMLLPGEAPFSIYDMSSWARGSTVPLLIVFDEKP
VYRLDPQISLDELYSEGVAAASFELPRTGDWSDGFVELDNLFKWGEQLNLVPFREEGLKA
AEDWVIERQEASGDWGGIIPAMLNSMLALRSLKYELGDPIVERGFEAIARFGVETDDTYW
VQPCVSPVWDTAWVVRSLVESGVLPDDSRIVKGANWLLSQQILDYGDWRVKNKTGEPGGW
AFEFDNRFYPDLDDSAVVVMALNQTQLPQPEKTQAAVKRGVAWMLSMQCQNGGWAAFDVD
NDKEWLNALPYSDLKATIDPPTADVTARILEMAAELETGGPETPLQQYAKQFERALAYLL
GEQEKDGSWFGRWGVNYIYGTSGALSALALITPEQHRPALERGANWLLAVQNADGGWGET
CLSYDHPRFKGEGDSTASQTAWALLGLMAVAKVLDSGASLAWQQAIERGITYLIETQQSD
GTWDESWFTGTGFPSHFYLRYDYYRLYFPLLALGRYRQMS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggataggaatagacttcaacaggccattcaggccagccaagagtatctcctgcaacag
caacagcctgaaggctattggtgggccgatcttgaatcgaacgtcactatgttggcggag
gtgattcttctgcataaaatttggcagcttgaggatcgccttccctgggggaaagccgag
cagtttttccgccaacagcaacagaatcacggaggctgggaactcttccgaggggatggg
ggagatttaagtacctccgtggaagcctatctgggattacggctgttgggggttcccgct
gatgatccggcgttgctgaaagccaagagctttattttggcgaaagggggaattagccaa
acgcgggtgtttacgaaaatgcacttggcgctgattggtgcttatgattggcgaggagtg
ccttcgattcccccttggattatgctgcttccaggggaggctccgtttagtatctatgat
atgtccagttgggccaggggcagtacagttcctctactgattgtctttgatgagaagccg
gtgtatcgtcttgaccctcagattagtttagatgaactctacagcgagggggtggcggcg
gcgtcctttgagttaccgcgcacgggggactggagcgatgggtttgtggaattggacaac
ctctttaagtggggggaacagcttaatttagtgcctttccgtgaggagggcctcaaggcg
gccgaagattgggtgattgagcgtcaagaagcaagcggggactggggggggattattccc
gccatgctcaattctatgctggcgctgcggagtctgaagtatgagctgggtgatccgatt
gtggaacgggggtttgaggcgatcgcccgcttcggggtggagacagacgatacttattgg
gtgcagccttgtgtgtccccggtttgggatacggcttgggtggtgcgatcgctggttgag
tctggtgtattaccagatgactcgcgtattgtcaagggggctaattggctcctgagtcag
caaattctcgattatggggattggcgggttaaaaacaaaaccggggaaccgggaggttgg
gcctttgagtttgacaatcgcttttatcccgatttggatgattcggcggtggtggtgatg
gccctgaatcaaacccaactcccccagccggagaaaacccaagcggctgtcaaacgggga
gtggcttggatgttgtcgatgcaatgtcagaatgggggctgggcggccttcgatgtggat
aatgataaggaatggttaaatgccttaccttacagtgatttgaaagctaccatcgaccct
cccacggctgatgtgacggcccggattttggaaatggcggcggagttggagacggggggc
ccggaaactcccttacagcaatatgctaagcaatttgaacgggccttagcctatttgttg
ggggaacaagagaaggatgggtcttggtttggccgttggggcgtcaactatatttatgga
accagtggtgcgttgtcggccttggctctcattacccctgaacagcaccgtccggctctg
gaacggggggcgaactggctgctggcggtgcaaaatgccgatgggggttggggggaaacg
tgtctgagttatgaccatcctcgttttaagggagagggggatagtaccgcctctcagacg
gcctgggcgttactggggttgatggctgtggcgaaagtgttagactcaggagcgagtttg
gcttggcagcaggccatcgaacggggaattacgtatttaattgagacgcaacagtctgat
ggaacttgggatgagtcctggtttacgggaacgggttttcccagtcacttctatctacgc
tatgactactatcgtctctattttcccctgttggcattaggacgctatcgccagatgtct
tag
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