Phormidium yuhuli: NEA10_16570
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Entry
NEA10_16570 CDS
T08410
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
pyh
Phormidium yuhuli
Pathway
pyh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pyh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NEA10_16570 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pyh01007
]
NEA10_16570 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pyh03016
]
NEA10_16570 (lysS)
Enzymes [BR:
pyh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
NEA10_16570 (lysS)
Amino acid related enzymes [BR:
pyh01007
]
Aminoacyl-tRNA synthetase
Class I (A)
NEA10_16570 (lysS)
Transfer RNA biogenesis [BR:
pyh03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NEA10_16570 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
Anticodon_2
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
DUF3871
Motif
Other DBs
NCBI-ProteinID:
USR90435
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All DBs
Position
3865118..3866710
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AA seq
530 aa
AA seq
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MFWADKIAASTQGDSVVNDSKTPSGRVHVGSLRGVIVHDTIYRALKRAQKPVRFLYGIDD
YDALDGIPAYLDSNRFQEYLGQPLCNVPSPGEGASDYAKYYSDEFFEVFEELGVRPEIYY
LRDLYRQGRLNSYIETFLQKAHLVREAYKQVSGAERAENWYPFHPICENCGKIATTVVSD
YNGKEVFYTCKPDAMSYVQGCGHSGWVSPFDGQGKLPWKVEWVAKWDLLGVTIELAGKDH
SQKGGSRDVANAIYRKVFDKRPPFHSPYEFILVGGTKMSSSKGVGASAREVANLLPPELL
RFLMLRTQPKTAINFSPNYETITRLFRDYDAAIEKYGCLSGEEQQGDLSKDLMALLYSQL
DDQIQPYYPFDFSTLISLLQVPHLDMEAEVAKRSPQALTELDQQVVRQRIEVAQKWLDDY
ADPEEKLILYVDEIPESVAALDEQQRQYLGELATRLEQLSDWEGETLQTEIFTTTKQLEL
PPKLAFPAVYQSFLGKERGPKAGNLLSYLERPFVVQRLREVAEGQGSAVS
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgttttgggctgataaaattgccgcgagtacacagggcgacagcgtcgtcaacgattcc
aaaactccctcgggacgggttcatgtggggtcgttgcggggggtgattgtccatgacacc
atttatcgggccctcaagcgtgctcagaaaccggtgcgcttcctctatggcattgatgac
tatgatgctctcgatgggattcccgcctatctcgatagcaatcgctttcaggagtatcta
ggacagcccctgtgcaatgttccctcgcccggtgagggggctagtgactatgccaaatac
tatagtgatgagttttttgaggtctttgaagagctgggggtgcgcccggagatttactat
ttacgagacctttaccgccaaggccgcttaaactcttatattgagaccttcttgcaaaag
gcgcacctcgtccgcgaagcctataaacaggtgagtggggctgaacgggctgagaattgg
tatcccttccatcccatctgtgagaactgcggcaaaatcgcgaccaccgttgtcagtgac
tacaatggcaaggaggtcttttatacctgtaaacccgatgccatgagctatgtccaaggc
tgtggccattcgggctgggtgtctccctttgatggtcagggtaaactcccctggaaggtt
gaatgggtcgcgaaatgggatctgttaggggtcaccattgagttggcggggaaagaccat
tcgcaaaagggcggttctcgggatgtggccaacgccatttatcgcaaggtctttgataaa
cggccgcccttccattctccctatgagtttatcctggtggggggaaccaagatgagttcc
tccaagggagtgggagccagtgcgcgggaagtggcgaatctgttgccgccggagttgttg
cgcttcttgatgttgcgcactcagccgaaaacggcgattaacttctctcccaactatgaa
accattacccggctgttccgggattatgacgcggccattgagaagtacggctgcctcagt
ggtgaggaacaacagggagatttgagtaaagatttaatggccctgctgtactcccaactt
gatgaccagattcagccctattatccctttgatttcagcactctgatttctctgctacaa
gttccccatctcgatatggaggcggaggttgcaaaacgcagtccacaggcgctgacggag
ttggatcagcaggtggtgcgtcagcggattgaggtggcgcaaaagtggttggatgattat
gcggaccctgaggaaaaactcattttatatgtggatgagattcctgagtcggtggcggcg
ttggatgagcaacaacgtcagtatctcggtgagttggcgactcgtctggagcagttgagc
gactgggagggggaaacgctgcaaacggagattttcacgaccacgaaacaactagagctt
cctcctaaattggcctttccggcggtttaccagagctttttgggtaaggaacggggaccc
aaggcgggcaatttgctgtcttatttggaacgtccctttgtggtgcaacggttgcgggag
gtggctgagggtcaaggctcagctgtatcctag
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