KEGG   Pseudomonas yamanorum: AK972_0280
Entry
AK972_0280        CDS       T05821                                 
Name
(GenBank) Sarcosine oxidase alpha subunit
  KO
K00302  sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
Organism
pym  Pseudomonas yamanorum
Pathway
pym00260  Glycine, serine and threonine metabolism
pym01100  Metabolic pathways
Module
pym_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:pym00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AK972_0280
Enzymes [BR:pym01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.3  With oxygen as acceptor
    1.5.3.1  sarcosine oxidase (formaldehyde-forming)
     AK972_0280
    1.5.3.24  sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
     AK972_0280
SSDB
Motif
Pfam: GCV_T SO_alpha_A3 Fer2_4 GCV_T_C Pyr_redox_2 FAD_binding_2 FAD_oxidored NAD_binding_8 DAO HI0933_like Pyr_redox_3 FAD_binding_3 GIDA Thi4 Pyr_redox AlaDh_PNT_C NAD_binding_9 Lycopene_cycl
Other DBs
NCBI-ProteinID: AMW81080
LinkDB
Position
285539..288556
AA seq 1005 aa
MSQINRLSNGGRIDRNKALSFTFNGQSYKGFEGDTLAAALLANGVDIIGRSFKYSRPRGI
FAAGAEEPNAVLQIGATEATQIPNVRATQQALYQGLVATSTNGWPSVNNDMMGILGKVGG
KLMPPGFYYKTFMYPQSFWMTYEKYIRKAAGLGRSPTENDPDTYDYMNRHCDVLIVGAGP
AGLSAALAAARSGARVIIADEQEEFGGSLLDSRESLDGKPAAEWVASVIAELKSLPDVVL
LPRATVNGYHDHNFLTIHERLTDHLGDRAPIGQVRQRIHRVRAKRVVLATGACERPLVYG
NNDVPGNMLAGAVSTYVRRYGVAPGKKLVLSTNNDHAYRVALDWFDAGLAVVAVADARHN
PRGALVEEARAKGIRILTGSAVIEARGSKHVTGARVAAIDVKAHKVTSPGEWLDCDLVAS
SGGYSPVVHLASHLGGKPTWREDILGFVPGEAPQKRVCVGGINGVYGLGDSLADGFEGGV
RAASEAGFAPVEGTLPKALSRLEEPTLALFQVPHEKATARAPKQFVDLQNDVTAAAIELA
TREGFESVEHVKRYTALGFGTDQGKLGNVNGLAIAARSLNVTIPQMGTTMFRPNYTPVTF
GAVAGRHCGHIFEPVRYTALQAWHVKNGAEFEDVGQWKRPWYFPRNGEDLHAAVKRECLA
VRDSVGLLDASTLGKIDIQGPDAREFLNRIYSNAWTKLDVGKARYGLMCKEDGMVFDDGV
TACLADNHFLMTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATMTLSGPNSRKL
LSEVTDIDLDKDGFPFMTWKEGLVGGVPARVFRISFTGELSYEVNVQADYAMGVLEKIVE
AGKKYNLTPYGTETMHVLRAEKGFIIVGQDTDGSMTPDDLNMGWCVGRTKPFSWIGWRGM
NREDCVREDRKQLVGLKPIDPNVWLPEGAQLVFDAKQTIPMKMVGHVTSSYAHNSLGYSF
AMGVVKGGLKRIGERVFAPLADGSVIEAEIVSSVFFDPKGDRQNI
NT seq 3018 nt   +upstreamnt  +downstreamnt
atgagccagatcaatcgcctgtccaacggtggccgcatcgaccgtaacaaagccctgagc
tttaccttcaacggccagagctacaaaggctttgagggcgacacattggccgccgcattg
ctggccaacggcgtcgacattatcggtcgcagcttcaagtattcccgcccgcgcggcatc
ttcgccgccggtgccgaagagccgaacgcggtgctgcagatcggcgccaccgaagccacg
caaatccctaacgtgcgcgccacgcaacaggcgctgtaccagggtttggtcgccaccagc
accaacggctggccgagcgtgaacaacgacatgatgggcattctaggcaaggtcggcggc
aagctgatgccgccgggtttctattacaaaaccttcatgtacccgcaatcgttctggatg
acttacgagaagtacatccgtaaggcagcaggtttaggccgctcgccgaccgagaacgat
ccggacacctatgactacatgaaccgtcattgcgacgtgctgattgtgggcgctggccct
gccggcctgtccgctgcattggccgctgcccgcagtggcgcccgggtgatcatcgcggac
gagcaggaagagttcggcggttccttgctggattcccgcgaaagcctcgatggcaagccg
gcggccgagtgggttgccagtgttattgcggaactgaaatccctgccggacgtggtgctg
ctgcctcgcgccaccgtcaacggttaccacgaccataacttcctgaccattcacgagcgc
ctcaccgatcacctcggtgaccgtgcgccgattggccaggtgcgccagcgcattcaccgg
gttcgcgccaagcgtgtggtgctggcgaccggcgcgtgtgaacgtccgctggtgtacggc
aacaacgacgtaccgggcaacatgctggcgggtgcggtctccacttacgtgcgtcgctac
ggcgtggcaccgggcaagaagctggtgctgtcgaccaacaacgatcacgcctaccgcgtt
gcgctggactggtttgatgcaggcctcgccgtggtggcggtggctgatgcacgccacaac
ccacgtggtgcactggttgaagaagctcgcgccaaggggattcgtatcctcaccggcagc
gccgtgatcgaagcccgtggcagcaagcatgtcactggcgcccgcgttgcggccattgat
gtgaaagcccataaagtcaccagtcccggcgaatggctggactgcgacctggtcgccagc
tccggcggttatagcccggtggttcacctggcctcgcacctgggcggcaagccgacctgg
cgtgaagacatcctcggttttgtgccgggcgaagcaccgcagaaacgcgtgtgcgtcggt
gggatcaatggcgtctatggcctcggcgattccctggctgacggttttgaaggtggcgtg
cgcgccgccagcgaagccgggtttgcgccggtggaagggacgctgcccaaagccttgagc
cgtctggaagagccgaccctggcgctgttccaggtgcctcacgagaaagctaccgcacgg
gcgccgaagcaatttgtcgacctgcaaaacgacgtcaccgcggccgccatcgaactcgcc
acccgcgaaggtttcgagtcggtagagcacgtcaaacgctacaccgcactgggcttcggc
accgatcagggcaagctcggcaacgtcaacggcctggccatcgcggcccgttcgctgaac
gtgactatcccgcagatgggcaccaccatgttccgccccaactacacgccggtgacgttc
ggcgcagtagcgggccgtcactgtgggcacatcttcgagccggtgcgctacaccgcgctg
caagcctggcacgtgaaaaacggcgccgagtttgaagacgtcggccagtggaagcgtccg
tggtatttcccgcgcaacggtgaagacctgcacgccgccgtgaaacgcgaatgcctggcc
gtgcgcgacagcgtcggcctgctggacgcgtccacccttggcaagattgacatccagggc
ccggatgcccgcgagttcctcaaccgcatctacagcaacgcctggaccaagctcgacgtg
ggcaaggcccgctacggcctgatgtgcaaggaagacggcatggtcttcgacgacggcgtc
accgcttgtctggccgacaaccacttcctgatgaccaccaccaccggcggcgcagcgcgc
gtactgcagtggctggaaatctaccagcagaccgaatggccagacctcaaggtgtacttc
acctcggtcaccgaccactgggcaaccatgacgttgtccggccccaacagccgtaagctg
ttgagcgaagtcaccgacatcgacctggacaaggacggcttcccgttcatgacctggaaa
gaaggcctggtgggcggcgtgccggcacgggtgttccggatttcgtttaccggtgagctg
tcgtacgaagtcaacgtgcaggccgactacgccatgggcgtgctcgagaaaatcgtcgag
gccggcaagaagtacaacctgacgccatacggcaccgagaccatgcacgtgctgcgggcc
gagaagggtttcatcatcgttggccaggataccgacggctcgatgaccccggacgacctg
aacatgggctggtgtgtaggccgcaccaaaccgttttcgtggatcggctggcgcgggatg
aatcgcgaagattgcgtgcgtgaagaccgcaagcaactggtgggcttgaagccgattgac
ccgaacgtatggctgccggaaggcgcgcagttggtgttcgacgccaagcagacgatcccg
atgaagatggtcggccatgtcacctccagttatgcccacaactccctcggttattcgttt
gccatgggcgtggtgaagggcggcttgaagcgcatcggcgagcgggtgtttgcaccgttg
gcggatggcagcgtgatcgaggcggagattgtttcttcggtgttctttgaccctaaaggc
gatcgccagaacatctga

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