Pseudomonas yamanorum: AK972_0280
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Entry
AK972_0280 CDS
T05821
Name
(GenBank) Sarcosine oxidase alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
pym
Pseudomonas yamanorum
Pathway
pym00260
Glycine, serine and threonine metabolism
pym01100
Metabolic pathways
Module
pym_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AK972_0280
Enzymes [BR:
pym01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
AK972_0280
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
AK972_0280
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_binding_2
FAD_oxidored
NAD_binding_8
DAO
HI0933_like
Pyr_redox_3
FAD_binding_3
GIDA
Thi4
Pyr_redox
AlaDh_PNT_C
NAD_binding_9
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AMW81080
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All DBs
Position
285539..288556
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AA seq
1005 aa
AA seq
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MSQINRLSNGGRIDRNKALSFTFNGQSYKGFEGDTLAAALLANGVDIIGRSFKYSRPRGI
FAAGAEEPNAVLQIGATEATQIPNVRATQQALYQGLVATSTNGWPSVNNDMMGILGKVGG
KLMPPGFYYKTFMYPQSFWMTYEKYIRKAAGLGRSPTENDPDTYDYMNRHCDVLIVGAGP
AGLSAALAAARSGARVIIADEQEEFGGSLLDSRESLDGKPAAEWVASVIAELKSLPDVVL
LPRATVNGYHDHNFLTIHERLTDHLGDRAPIGQVRQRIHRVRAKRVVLATGACERPLVYG
NNDVPGNMLAGAVSTYVRRYGVAPGKKLVLSTNNDHAYRVALDWFDAGLAVVAVADARHN
PRGALVEEARAKGIRILTGSAVIEARGSKHVTGARVAAIDVKAHKVTSPGEWLDCDLVAS
SGGYSPVVHLASHLGGKPTWREDILGFVPGEAPQKRVCVGGINGVYGLGDSLADGFEGGV
RAASEAGFAPVEGTLPKALSRLEEPTLALFQVPHEKATARAPKQFVDLQNDVTAAAIELA
TREGFESVEHVKRYTALGFGTDQGKLGNVNGLAIAARSLNVTIPQMGTTMFRPNYTPVTF
GAVAGRHCGHIFEPVRYTALQAWHVKNGAEFEDVGQWKRPWYFPRNGEDLHAAVKRECLA
VRDSVGLLDASTLGKIDIQGPDAREFLNRIYSNAWTKLDVGKARYGLMCKEDGMVFDDGV
TACLADNHFLMTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATMTLSGPNSRKL
LSEVTDIDLDKDGFPFMTWKEGLVGGVPARVFRISFTGELSYEVNVQADYAMGVLEKIVE
AGKKYNLTPYGTETMHVLRAEKGFIIVGQDTDGSMTPDDLNMGWCVGRTKPFSWIGWRGM
NREDCVREDRKQLVGLKPIDPNVWLPEGAQLVFDAKQTIPMKMVGHVTSSYAHNSLGYSF
AMGVVKGGLKRIGERVFAPLADGSVIEAEIVSSVFFDPKGDRQNI
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgagccagatcaatcgcctgtccaacggtggccgcatcgaccgtaacaaagccctgagc
tttaccttcaacggccagagctacaaaggctttgagggcgacacattggccgccgcattg
ctggccaacggcgtcgacattatcggtcgcagcttcaagtattcccgcccgcgcggcatc
ttcgccgccggtgccgaagagccgaacgcggtgctgcagatcggcgccaccgaagccacg
caaatccctaacgtgcgcgccacgcaacaggcgctgtaccagggtttggtcgccaccagc
accaacggctggccgagcgtgaacaacgacatgatgggcattctaggcaaggtcggcggc
aagctgatgccgccgggtttctattacaaaaccttcatgtacccgcaatcgttctggatg
acttacgagaagtacatccgtaaggcagcaggtttaggccgctcgccgaccgagaacgat
ccggacacctatgactacatgaaccgtcattgcgacgtgctgattgtgggcgctggccct
gccggcctgtccgctgcattggccgctgcccgcagtggcgcccgggtgatcatcgcggac
gagcaggaagagttcggcggttccttgctggattcccgcgaaagcctcgatggcaagccg
gcggccgagtgggttgccagtgttattgcggaactgaaatccctgccggacgtggtgctg
ctgcctcgcgccaccgtcaacggttaccacgaccataacttcctgaccattcacgagcgc
ctcaccgatcacctcggtgaccgtgcgccgattggccaggtgcgccagcgcattcaccgg
gttcgcgccaagcgtgtggtgctggcgaccggcgcgtgtgaacgtccgctggtgtacggc
aacaacgacgtaccgggcaacatgctggcgggtgcggtctccacttacgtgcgtcgctac
ggcgtggcaccgggcaagaagctggtgctgtcgaccaacaacgatcacgcctaccgcgtt
gcgctggactggtttgatgcaggcctcgccgtggtggcggtggctgatgcacgccacaac
ccacgtggtgcactggttgaagaagctcgcgccaaggggattcgtatcctcaccggcagc
gccgtgatcgaagcccgtggcagcaagcatgtcactggcgcccgcgttgcggccattgat
gtgaaagcccataaagtcaccagtcccggcgaatggctggactgcgacctggtcgccagc
tccggcggttatagcccggtggttcacctggcctcgcacctgggcggcaagccgacctgg
cgtgaagacatcctcggttttgtgccgggcgaagcaccgcagaaacgcgtgtgcgtcggt
gggatcaatggcgtctatggcctcggcgattccctggctgacggttttgaaggtggcgtg
cgcgccgccagcgaagccgggtttgcgccggtggaagggacgctgcccaaagccttgagc
cgtctggaagagccgaccctggcgctgttccaggtgcctcacgagaaagctaccgcacgg
gcgccgaagcaatttgtcgacctgcaaaacgacgtcaccgcggccgccatcgaactcgcc
acccgcgaaggtttcgagtcggtagagcacgtcaaacgctacaccgcactgggcttcggc
accgatcagggcaagctcggcaacgtcaacggcctggccatcgcggcccgttcgctgaac
gtgactatcccgcagatgggcaccaccatgttccgccccaactacacgccggtgacgttc
ggcgcagtagcgggccgtcactgtgggcacatcttcgagccggtgcgctacaccgcgctg
caagcctggcacgtgaaaaacggcgccgagtttgaagacgtcggccagtggaagcgtccg
tggtatttcccgcgcaacggtgaagacctgcacgccgccgtgaaacgcgaatgcctggcc
gtgcgcgacagcgtcggcctgctggacgcgtccacccttggcaagattgacatccagggc
ccggatgcccgcgagttcctcaaccgcatctacagcaacgcctggaccaagctcgacgtg
ggcaaggcccgctacggcctgatgtgcaaggaagacggcatggtcttcgacgacggcgtc
accgcttgtctggccgacaaccacttcctgatgaccaccaccaccggcggcgcagcgcgc
gtactgcagtggctggaaatctaccagcagaccgaatggccagacctcaaggtgtacttc
acctcggtcaccgaccactgggcaaccatgacgttgtccggccccaacagccgtaagctg
ttgagcgaagtcaccgacatcgacctggacaaggacggcttcccgttcatgacctggaaa
gaaggcctggtgggcggcgtgccggcacgggtgttccggatttcgtttaccggtgagctg
tcgtacgaagtcaacgtgcaggccgactacgccatgggcgtgctcgagaaaatcgtcgag
gccggcaagaagtacaacctgacgccatacggcaccgagaccatgcacgtgctgcgggcc
gagaagggtttcatcatcgttggccaggataccgacggctcgatgaccccggacgacctg
aacatgggctggtgtgtaggccgcaccaaaccgttttcgtggatcggctggcgcgggatg
aatcgcgaagattgcgtgcgtgaagaccgcaagcaactggtgggcttgaagccgattgac
ccgaacgtatggctgccggaaggcgcgcagttggtgttcgacgccaagcagacgatcccg
atgaagatggtcggccatgtcacctccagttatgcccacaactccctcggttattcgttt
gccatgggcgtggtgaagggcggcttgaagcgcatcggcgagcgggtgtttgcaccgttg
gcggatggcagcgtgatcgaggcggagattgtttcttcggtgttctttgaccctaaaggc
gatcgccagaacatctga
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