Pseudomonas yamanorum: AK972_1688
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Entry
AK972_1688 CDS
T05821
Name
(GenBank) Methylcrotonyl-CoA carboxylase biotin-containing subunit
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
pym
Pseudomonas yamanorum
Pathway
pym00907
Pinene, camphor and geraniol degradation
pym01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AK972_1688
Enzymes [BR:
pym01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
AK972_1688
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
HlyD_3
ATP-grasp_3
HlyD_D23
RnfC_N
UPF0150
RimK
LAL_C2
MCC_alpha_BT
ATPgrasp_Ter
DNAPolymera_Pol
Motif
Other DBs
NCBI-ProteinID:
AMW82488
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All DBs
Position
complement(1795883..1797817)
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AA seq
644 aa
AA seq
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MPMFNKILIANRGEIACRIQRTAQSLGYRTVAIYSEADTEALHVQMADEAINIGPAPVTQ
SYLNIEAILNAAHRTGADAIHPGYGFLSENPDFARACANAGLTFIGPSPEAIELMGSKRL
SKLAMLNAGVPCIKGYQGPDQDDPTLQQQAAHIGYPLMIKASAGGGGRGMRLVHSPDTLL
EHLRTARSEAQNAFGSAELILEQALIDPRHVEIQLFGDTHGNLIYLGERDCSIQRRHQKV
IEEAPCPVMTDELRQAMGEAALKAARAVNYVGAGTVEFLLDRNDKFYFLEMNTRLQVEHP
VTELITGLDLVAWQLQIAAGQPLPLSQDQVTLSGHAMEVRLYAEDPAQGFLPQTGDVLRW
EPAAGVRIDHGVLEGQRITPFYDPMLGKIIAHGATREEARRKLVRAVEDCVLLGVSTNQR
LLASLLKHPRFVAADFSTGFIAEHFNDIARTHATNEELALAAALFYQQSANAHAKPLSGW
RNNASVPWRYQLAEQDEPRAISLTVLADNCLQVDIDQHAVEIRDLTTDGRWATTVVNGIR
RRIAYHQQGTRLWLPGVCIDNRTQAVAARQAEAGDGTVKAPMDGAIVEVRVSEGDSVTQG
QLLLVLEAMKMEHPLKAGMSGVVKRIQAVAGDQVRIRQILLEIE
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgttcaacaaaatcctcatagccaaccgtggcgaaatcgcctgccgcatccag
cgcaccgcccaatccctgggctaccgcaccgtagcgatctacagcgaagccgacaccgaa
gccctgcacgtccagatggccgacgaagccatcaacatcggccccgccccggtcacccag
tcctacctgaacatcgaagccatcctcaacgccgcccaccgcaccggcgccgacgccatc
caccccggctacggcttcctctccgaaaaccccgacttcgcccgcgcctgcgcaaacgcc
ggcctgaccttcatcggccccagccccgaagccatcgaattgatgggcagcaaacgcctc
tcaaaactcgccatgctcaacgccggcgtcccctgcatcaaaggctaccaaggccccgac
caggacgacccaaccctgcaacaacaagccgcccacatcggctatcccctgatgatcaag
gccagcgccggcggcggcggtcgcggcatgcgcctggtgcacagccccgacaccctgctg
gaacacctgcgcaccgcccgctccgaagcgcaaaacgccttcggcagcgccgaactgatc
ctcgaacaagccctgatcgacccccgtcacgtcgaaatccagctgttcggcgacacccac
ggcaatctgatctacctcggcgagcgcgactgctcgatccagcgccgccatcaaaaggtc
atcgaagaagccccctgccccgtcatgaccgacgagctacgccaagccatgggcgaagcc
gccctcaaggccgcccgcgccgtcaattacgtcggcgccgggaccgtcgaattcctcctc
gaccgcaacgacaagttctacttcctggaaatgaacacccgcctccaggtcgaacacccg
gtcaccgaactgatcaccggcctcgacctcgtcgcctggcaactgcagatcgccgccggc
cagccgcttcccctgagtcaggaccaagtaaccctgagcggccacgccatggaagtacgc
ctgtatgccgaagacccggcacaaggcttcctgccgcaaaccggcgacgtgctgcgctgg
gagccggcggccggtgtgcgcatcgatcatggcgtgctggaaggccaacgcatcaccccg
ttctacgacccgatgctgggcaagatcatcgcccacggcgccacccgcgaagaggctcgg
cgcaaattggtaagggccgtggaagactgcgtactgctcggcgtatccaccaaccagcgc
ctgctggccagcctgctcaagcatccccggtttgtcgccgctgacttcagcaccggcttt
atcgccgagcatttcaacgacatcgcccgaacccacgcgaccaacgaagaattggcattg
gccgccgcgctgttttaccagcagagcgccaacgctcacgccaagccattatccggctgg
cgcaacaacgccagcgtgccgtggcgttatcaactggccgaacaggatgagccccgggca
atcagcctcactgtgctggcggacaattgcctgcaggtcgacattgatcagcacgccgtc
gaaatacgcgacctcaccaccgacggacgctgggccaccaccgtggtcaacggcattcgc
cgtcgcatcgcctaccaccagcaaggcacccggctctggctgcctggtgtgtgcatcgat
aaccgcacacaagccgttgccgcccgccaggccgaggccggcgacggcacggtcaaggcg
ccgatggatggggcgattgtcgaggtacgggtcagcgaaggcgattcagttacccagggc
cagctattgctggtgctggaagcgatgaaaatggagcatcccctcaaggccggcatgagt
ggtgtggtcaagcgaatccaggcggttgcgggagatcaggtcaggatccgtcagattttg
ctggagatcgagtaa
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