Pseudomonas yamanorum: AK972_5571
Help
Entry
AK972_5571 CDS
T05821
Name
(GenBank) tRNA S(4)U 4-thiouridine synthase (former ThiI)
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pym
Pseudomonas yamanorum
Pathway
pym00730
Thiamine metabolism
pym01100
Metabolic pathways
pym01240
Biosynthesis of cofactors
pym04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AK972_5571
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
AK972_5571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pym03016
]
AK972_5571
Enzymes [BR:
pym01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
AK972_5571
Transfer RNA biogenesis [BR:
pym03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
AK972_5571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AMW86371
LinkDB
All DBs
Position
complement(6193723..6195177)
Genome browser
AA seq
484 aa
AA seq
DB search
MKLIVKVFPEITIKSRPVRMRFIRQLAKNIRAVLRDLDPAVVVNGVWDNLELETRLTDPK
ALKDMTERLSCVPGIAHFLQVDEYPLGDFDDITEKCKQHYGDVLAGKVFSVRCKRAGKHP
FSSMDVEKYVGSKLRRECGAAGISLKAPQIEVRMEIRDQRLFVIHSQHDSIGGYPLGALE
QTLVLMSGGFDSTVAAYQIMRRGLMSHFCFFNLGGRAHELGVMEVAHYIWKKYGSSQRVL
FVSVPFEEVLGEILGKVDNSHMGVVLKRMMLRAASRIADRLEIDALVTGEAISQVSSQTL
PNLSLIDSVTEKLVLRPLIASHKQDIIDLATQIGTADFAKHMPEYCGVISVNPKTHAKRN
RVEYEEQQFDMAVLERALENAKLVPIDRVIDELGQDLQIEEVSEALAGQIIIDIRHPDAA
EDEPLEIAGIDVQTLPFYALNARFKELDDSRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaatcgttaaagtcttccccgagatcaccatcaagagccgaccggtacggatg
cgtttcatccgtcaattggccaagaacatccgtgccgtgctccgcgatctggacccggct
gtggtggtgaacggtgtgtgggacaatctcgaactggaaacccgcctcacagaccccaag
gccttgaaggacatgaccgagcgcctgagctgcgtgccgggcatcgcgcatttcctgcag
gtcgacgagtacccgttgggtgacttcgacgacatcaccgaaaagtgcaaacagcactac
ggcgatgtgctggcgggcaaggttttttcggtgcgttgcaaacgcgccggcaagcacccg
ttcagctccatggatgtcgagaaatacgtgggcagcaagctgcgtcgcgagtgcggtgcc
gccggaatttccctgaaagcgccacaaattgaagtgcggatggaaattcgcgaccaacgg
ttgtttgtgatccacagccagcacgacagcatcggcggctacccgctgggtgccctggaa
cagaccctggtcttgatgtccggcggtttcgattccaccgtcgcggcctaccagatcatg
cgccgcgggctgatgagccacttctgcttctttaacctgggcggccgtgcacacgaattg
ggcgtgatggaagtcgcgcattacatctggaagaagtacggcagctcgcaacgggtcctg
tttgtcagcgttccgttcgaggaggtcctgggagaaattctcgggaaagtcgataacagt
catatgggcgtagtattgaagcgtatgatgttgcgcgctgcgtcccgaatcgcggatcgg
ctggaaatcgacgcattggtcaccggtgaagcgatttcccaggtgtccagccagaccctg
ccgaacctgtcgttgatcgactctgtgaccgagaagctggtattgcgcccgctgatcgcc
agtcacaagcaagacatcatcgacctggcgacccagatcggcacggcggatttcgccaag
cacatgccggaatattgcggggtcatctcggtgaaccccaagacccacgctaaacgcaac
cgcgtggagtacgaagaacaacagttcgacatggcggtgctcgagcgagcgcttgagaac
gccaaactggtgccgatcgatcgggttatcgacgaattgggccaggatttgcagatcgaa
gaagtcagcgaggctctggccggtcagatcatcatcgacatccgtcacccggatgccgct
gaagacgagccgctggaaattgctggcatcgacgtacaaacgctgccgttctatgcattg
aatgcgcgtttcaaggaactggatgacagccgtcagtacctgttgtattgcgacaaaggc
gtgatgagtcgcctgcatgcccaccatttgctcagtgaggggcatgccaatgtgcgcgtt
tatcgaccgagctaa
DBGET
integrated database retrieval system
