Plasmodium yoelii: PY17X_0709400
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Entry
PY17X_0709400 CDS
T01035
Name
(RefSeq) pre-mRNA cleavage complex II protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pyo
Plasmodium yoelii
Pathway
pyo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pyo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PY17X_0709400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyo03019
]
PY17X_0709400
Enzymes [BR:
pyo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
PY17X_0709400
Messenger RNA biogenesis [BR:
pyo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
PY17X_0709400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_N
CLP1_P
Clp1
nSTAND3
AAA_29
Motif
Other DBs
NCBI-GeneID:
3789838
NCBI-ProteinID:
XP_724513
UniProt:
A0A078K8G0
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All DBs
Position
7:complement(521819..523588)
Genome browser
AA seq
589 aa
AA seq
DB search
MENANNTRIYHLKMYRELRIVTLEKPLKNEENEECIKIRILPIQGSNNNNDDKNTQMCVA
EIFGKELVIDKDYYFGYNEKFSIYTFTGCIIQIKGKTLQEYESKNSTIKEYLSLSYVLDA
YRNLAKKKKKIGPRVLITGNNNSGKSSVSMLLLNYAFKSGFKPIYIEGDPKGNCDKIDIN
RGPGIMSCFIYDNNERKNNGPNITPNNTPNNIPNNRYRYALDYFFGYLDILDDINLYYHI
NECISSCIYLMLLNNLNYYSGNLKNNSEQEIIYSSGFILNVPSEADIKIVKNLIDIYNIN
IVVIIDNSFLHYSLKECYDKEEKESSLENCKNLEKKKYNNLGLYKSSKNIKYNEKEEDIK
FEKNNDDAKNNDDAKNNDDENNDDENNDDENNDDVNKIEIIEMPKYEGVIPSDNSRVRYC
RNLWFYDYFYKNINVNNAIYKKCHIITIKYNQTNFVRLDTKLAVPLSALPADWKNIKREN
VHVTSYNGNIKNLMNCILGISYSKKINYVHLINIAGFAHVQNVRKIEIDNDNQKNEDKDK
DYDNIEETDKNTDQITNDFFIDILCPVSITTKNIPPYFIIPGNMKHIRF
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgcaaataataccagaatttatcatttgaaaatgtatagagaacttcggata
gttacccttgaaaaaccattaaaaaacgaagaaaatgaggaatgtataaaaattcgaata
ttgccaattcaagggagtaataataataatgatgataaaaatacgcaaatgtgtgtagct
gaaatatttggaaaagaattagttattgataaagattattattttggatacaatgaaaag
ttttctatatatacctttactggatgtataattcaaataaaaggaaaaacattacaagaa
tatgaaagtaaaaattctacaataaaagaatatttatctttatcttatgttttagatgct
tatagaaatttagcaaaaaaaaaaaaaaaaattggacccagagtattaataacaggaaat
aataattctggaaaaagttctgtttctatgcttttgttaaattatgcattcaaatcaggt
tttaaacctatttatatagaaggtgacccaaaaggtaattgtgataaaattgatataaat
agaggtcctggaattatgagttgttttatttatgataataatgaaaggaaaaataatggc
ccaaacatcactccaaataacactccaaataacattccaaataatcgttatagatacgca
ttagattatttttttggttatttagacatattagatgatataaatttgtattatcatatt
aatgaatgtattagtagttgtatatatttaatgttgttaaataacttaaattattattca
ggaaatttaaaaaataattctgaacaagaaattatttattcttctgggtttattttaaat
gtaccatctgaagctgatattaagattgtaaaaaatttaatcgatatatataatataaat
atagttgttattattgataattcatttttacattattctttaaaagaatgttatgataaa
gaagaaaaagaaagcagtttggaaaattgtaaaaatttagaaaaaaaaaaatacaataat
ttgggattatataaatcaagtaaaaatatcaagtataatgaaaaagaagaagatataaaa
tttgaaaaaaataatgatgatgcaaaaaataatgatgatgcaaaaaataacgatgatgaa
aataatgatgatgaaaataatgatgatgaaaataatgatgatgttaataaaattgaaata
atcgaaatgcccaaatatgaaggtgttataccatctgataatagtagagtacgatattgt
agaaacttatggttttatgattatttttataaaaatataaatgttaataatgcaatatat
aaaaaatgtcatattataacaattaaatataaccaaacaaattttgttcgattagataca
aaattagcagtacctttatctgctttacctgcagattggaaaaatataaaaagagaaaat
gttcatgtaactagctataatggaaatataaaaaatttaatgaattgtattttaggtata
tcttattctaaaaaaataaattatgttcatcttataaatatagccggttttgcacatgta
cagaatgtaagaaaaatagaaatagataatgataaccaaaaaaatgaagataaagataaa
gattatgataatattgaagaaactgataaaaatactgaccaaataaccaatgattttttt
attgatattttatgtccagtttctataacaacaaaaaatataccaccatattttattatc
ccaggaaatatgaaacatattaggttttaa
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