Pyrobaculum sp. WP30: PYWP30_02225
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Entry
PYWP30_02225 CDS
T04013
Name
(GenBank) DNA-directed RNA polymerase, subunit B'/DNA-directed RNA polymerase, subunit B'
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
pyw
Pyrobaculum sp. WP30
Pathway
pyw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pyw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PYWP30_02225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pyw03021
]
PYWP30_02225
Enzymes [BR:
pyw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PYWP30_02225
Transcription machinery [BR:
pyw03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
PYWP30_02225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
AKT35836
UniProt:
A0A0K1E4M6
LinkDB
All DBs
Position
1944023..1947406
Genome browser
AA seq
1127 aa
AA seq
DB search
MVDLLPLPVLTSAQDGGFPSRDDRWALVERFIRDKGLANHQIKSFNDFLDKKLPKIVEEF
KVVETEIKGLKIVLERLEVGWPRIKESDGSESLIYPMEARLRNATYSAPMYLTATLYVDD
EPYVTETFYIGELPIMVKSKRCNLTRLKPGEYVKKFEDVQDFGGYFIINGSERVIISQED
LVADRPIYDKGDKPSVRYLAKTISTGIGYRSTLTVELGRDGVLYATLSAMPVKIPFPIYM
KALGLETDEDVVKAVSDDPEIQKELLPSLIAANQIAITREDALDFIGGKVAVGQPKPIRI
DRALQLLDRYFLPHLGTAVPDEKRQQEIRLKKALMLGQIVKGLVELHLGRRKPDDKDHVA
NKRVRLVGDLMTQLFRTVFKQFLQELKSQLEKYYARGRIPHIQTIVRPDIITERVRQALA
TGNWVGGKTGVSQILDRTNYLSTLSYLRRAVSSLSRTQPHFEARDLHPTQWGRLCAVETP
EGQNVGLVKNLALLAEVTTGVDEDEVEQLLLNLGVVPVLKAREEGIGGAEVYLNGRLMGI
HPSPEELANTVRGLRRQGKISDEINIALLNGSIYVNCDGGRIRRPLLVVEDGKLKLTKDV
VDKVRRGELTWDDLVKMGVVEYLDADEEENAYIAVDPSGDLSKYTHVEIIPSSILGAIGS
IIPYLEHNQSPRNQYEAAMAKQSLGLPQSNFLYKLDSRGHMLYYPERPIVTTRGLELVGY
SKRPAGQNAVVALLTYTGYNIEDAVILNKASVERGMLRSVFYRTYETEEQKYPGGEEDRI
EIPDSSVKGYRGPEAYSHLDEDGIAPPEAYVSSSEVIIGKTSPPRFYTTLEAERILKERR
DASIAVRRGEKGIVDRVIITESPEGNKLVKVRLRELRIPELGDKFASRHGQKGVVGMLLR
HEDMPFTEEGIVPDIIVNPHALPSRMTVAQLLESMAGKVGASTGQLVDATPFEGVKEEDL
RKLLLKLGYKWDGKEVMYSGITGERLVADIFIGVVYYQKLHHMVADKIHARARGPVQILT
RQPTEGRSREGGLRLGEMERDVLIAHGASALLYERMVESSDKYVMYVCELCGLPAYLDAK
SNKPRCPIHGDTGQFAKVTVPYAFKLLLQELIALGIYPRLELAEVLD
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatcttcttccactaccggtgctcaccagtgcgcaagatggggggttcccctcc
agggacgacaggtgggctcttgtggagaggtttatcagggataagggccttgcgaaccac
cagataaaatctttcaacgacttcctggacaagaagttgcctaagatcgtggaggagttt
aaggtggtcgagacggagatcaagggccttaagatcgtgttggagcggctggaggttggg
tggcctaggattaaggagagcgacggctccgagtcgttgatctacccgatggaggctagg
ttgcgcaacgccacctactcggcccctatgtatctcacagccactctttatgtagacgac
gagccgtacgtcactgagaccttctacataggtgagctccccatcatggttaagtctaag
aggtgcaacttgaccaggctgaagccgggcgaatacgtgaagaagtttgaagatgtgcag
gacttcggcggctacttcataatcaacggcagcgagcgcgtgattatttcgcaggaggat
ttagtggcggataggcctatctacgacaagggcgacaagccgtcggtcagatacctcgcc
aagacaatctccacgggcataggctacagaagcacgcttactgtggagctcggcagagat
ggcgtgttgtacgccacgctttctgcgatgcccgtgaagatacccttccccatatatatg
aaggctctgggcctggagaccgacgaggacgtggtgaaggctgtgtcggacgaccccgag
atccagaaggagctccttccctcgctcattgccgcaaaccagatagctataacgagggag
gacgcgctggatttcataggcggcaaggtggctgtgggtcagcccaaaccgataagaata
gaccgggctctccagctacttgacaggtacttcctgccgcatctaggcaccgccgtcccc
gacgagaagaggcaacaggaaatcaggctcaagaaggcgttgatgctgggccagatcgtg
aagggcttggtggagcttcacctgggtaggaggaagcccgacgacaaagatcacgtggct
aacaagagggttaggctcgtcggcgatttgatgacccagctgtttcggacggtatttaag
cagttcctacaagagctcaagagccagctggagaagtactacgcccgcggcaggatcccg
cacatccagaccatagtgaggccggacataatcacggagagggttaggcaggccttggcc
accggcaactgggtcggcggcaaaaccggcgtctcgcagatactcgaccgcaccaactac
ctatccacgctgagctacttgaggcgtgctgtgtcgtcgctttcgagaactcagcctcac
ttcgaggcccgcgacctgcacccgactcagtggggcaggctctgcgctgtggagacgccg
gaggggcagaacgtgggtctcgtcaagaacttagccctccttgcggaggtcaccaccggc
gtagacgaagacgaggtggagcaactgctcctcaacctcggcgtggtgcccgtcctcaag
gccagggaggagggcataggcggcgccgaggtgtacctcaacgggaggctgatggggata
caccccagccccgaggagctggcgaacaccgtcagaggcttgaggaggcaaggcaagatc
agcgatgagataaacatcgcgttgctaaatggatccatctacgtgaattgcgacgggggc
cgcatcaggagacccctcttggtggtggaggatgggaagctcaagttgacaaaagacgtg
gtggataaggtcaggcggggcgagttgacctgggacgacttggttaagatgggggtggtc
gagtatctagacgcggacgaggaggagaacgcctacatcgcggtggaccccagcggcgac
ttgagcaagtatacgcacgtggagataatcccctcctcgatacttggagccatcggctcc
atcatcccctatctagagcacaaccagtctccccgcaaccagtacgaggcggccatggcg
aagcagtctctaggcctgccgcagtccaacttcctctacaagctggactcccgcggccat
atgttgtactaccccgaaaggcccatagtgactacgcgggggctggaactggttggctac
tccaagaggccggctggccaaaacgccgttgtggccctcctgacgtatacgggctacaac
atagaagacgccgtgattctgaacaaggcgtctgtggagcgcggcatgcttaggtctgtg
ttttatcgtacctacgagaccgaggagcagaagtacccagggggggaggaggataggatt
gagatacccgacagctccgtgaaggggtacagggggcctgaggcatacagccaccttgac
gaagacggcatcgcgccgcctgaggcgtatgtgagcagtagtgaagttataatcggcaag
acctcgccgccgaggttctacaccacgctggaggccgagcgcatcttgaaggagaggaga
gacgcctccatagccgtgagacgcggcgagaagggcatagtagatagggtgatcatcacg
gagtcgccggaaggcaacaagctggtcaaggtgaggctgagggagctgaggatcccggag
ctcggcgataagttcgcttcgcgccacggccagaagggcgtcgtgggcatgttgcttaga
catgaggacatgccgtttaccgaggagggcatcgtgccggacataatcgtgaacccgcac
gccctgccgtcccgcatgacggtggcgcaactgctggagagcatggctggaaaagtggga
gcctccacgggtcagctggtagacgccacgccatttgagggggtcaaggaggaggatctc
cgaaagctcctcctcaagctgggatataagtgggatgggaaggaggtgatgtacagcggc
ataaccggcgagaggcttgtggcggatatattcataggggttgtgtactaccagaagctc
caccacatggtggccgataaaatacatgcgagggctagaggccctgtccagatactcacc
aggcaacccactgagggcagatcacgcgagggaggccttaggctcggcgagatggagaga
gacgtcttgatagcacacggcgcctcggcgttgctctatgagaggatggtcgagtcaagc
gataaatacgtgatgtatgtctgcgagctctgcggcctccccgcgtatctagacgccaag
agcaacaaaccgagatgccccatccacggcgacacgggacagttcgccaaggtgaccgtg
ccctacgccttcaagctgttgcttcaggagctcatagcgctggggatttaccctaggctt
gagctggccgaggttctggactaa
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