Pseudomonas zarinae: HU749_007245
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Entry
HU749_007245 CDS
T07889
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pza
Pseudomonas zarinae
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pza03009
]
HU749_007245 (rimO)
Enzymes [BR:
pza01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HU749_007245 (rimO)
Ribosome biogenesis [BR:
pza03009
]
Prokaryotic type
ribosomal protein modification factors
HU749_007245 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QXH96174
LinkDB
All DBs
Position
complement(1637505..1638845)
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AA seq
446 aa
AA seq
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MSTTTAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLSVTGPQQYEQVVNAVHDVVP
PRQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKAGVKELLVISQDTSAYGVDVKYRTGFWNGSPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWREICPD
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLDLDVVPDDVK
QDRWERFMAHQQAISSARLQMRIGREIEVLVDEVDEQGAVGRCFFDAPEIDGNVFIDNGS
NLKPGDKVWCKVTDADEYDLWAEQIG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactaccgcgcccgccaatccgaaggttggcttcgtatccctgggttgcccg
aaagctctggtcgactccgagcgcatcctgacccagctgcgcatggaaggctatgacgtc
gtgtccacgtatcaggacgccgatgtggtcgtggtcaacacctgcggcttcatcgattcg
gccaaggccgagtccctggaagtgatcggcgaagccatcaaggaaaacggcaaggtcatc
gtcaccggctgcatgggcgtggaagaaggcaacatccgcaacgtgcacccaagcgtgttg
tccgtgaccggtccgcagcagtacgagcaggtggtcaacgccgtgcatgacgtggtgccg
ccacgccaggaccacaacccgctgatcgacctggtgccgccacaaggcatcaagctgacc
ccgcgccactacgcctacctgaagatttccgaaggctgcaaccacagctgcagcttctgc
atcatcccgtcgatgcgcggcaagctggtgagccgcccggtgggcgatgtgctcgacgag
gcccagcgtctggtcaaggccggcgtcaaggaactgctggtgatctcccaggacaccagc
gcctacggcgtcgacgtgaaataccgcaccggcttctggaatggctccccggtgaaaacc
cgcatgaccgaactgtgcgaagccctcagcaccctcggcgtctgggtccgcctgcattac
gtctacccgtatccacatgtcgacgaactgatcccgctgatggccgccggcaagatcctg
ccgtacctcgacatcccgttccagcacgccagcccgaaagtcctcaaggccatgaagcgc
ccggcgttcgaagacaagaccctggcccgcatcaagaactggcgcgaaatctgcccggac
ctgatcatccgttcgaccttcatcgtcggcttccccggtgagaccgaagaagacttccag
tacctgctggattggctgaccgaagctcagctcgaccgcgtcggctgcttccagtattcc
cctgtcgaaggcgccccggccaacgacctggacctggacgtggtgccggacgacgtcaag
caggaccgttgggagcgcttcatggcgcaccagcaggccatcagctcggcgcgcctgcaa
atgcgcatcggccgtgaaatcgaagtgctggtggacgaggtggacgagcaaggcgccgtg
ggccgctgcttcttcgacgccccggaaatcgacggcaacgtcttcatcgacaacggcagc
aacctcaagccgggtgacaaggtctggtgcaaagtgaccgacgccgatgagtacgatttg
tgggctgagcagatcggttga
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