Pseudomonas zarinae: HU749_010515
Help
Entry
HU749_010515 CDS
T07889
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pza
Pseudomonas zarinae
Pathway
pza00071
Fatty acid degradation
pza00280
Valine, leucine and isoleucine degradation
pza00310
Lysine degradation
pza00362
Benzoate degradation
pza00380
Tryptophan metabolism
pza00410
beta-Alanine metabolism
pza00640
Propanoate metabolism
pza00650
Butanoate metabolism
pza00907
Pinene, camphor and geraniol degradation
pza00930
Caprolactam degradation
pza01100
Metabolic pathways
pza01110
Biosynthesis of secondary metabolites
pza01120
Microbial metabolism in diverse environments
pza01200
Carbon metabolism
pza01212
Fatty acid metabolism
Module
pza_M00087
beta-Oxidation
pza_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pza00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HU749_010515 (fadB)
00650 Butanoate metabolism
HU749_010515 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HU749_010515 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HU749_010515 (fadB)
00310 Lysine degradation
HU749_010515 (fadB)
00380 Tryptophan metabolism
HU749_010515 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HU749_010515 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HU749_010515 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HU749_010515 (fadB)
00930 Caprolactam degradation
HU749_010515 (fadB)
Enzymes [BR:
pza01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HU749_010515 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HU749_010515 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HU749_010515 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HU749_010515 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QXH96796
LinkDB
All DBs
Position
2362646..2364793
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELIAGNLEANRIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMTTTAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVEPGKLKEAALETLKRAISGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIASDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDKVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEHAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFYAYETDKRGKQ
KKVADSSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQRFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaatgaattg
cgtcaggctgtagacactatcaaggcagatgcttcgatcaagggtgtgatcgtcagcagc
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaattcgtcgacaacttcaagctg
cccgatgccgaactgatcgctggcaacctcgaagccaaccgtattttcagcgacttcgaa
gacctcaacgtaccgaccgtcgcggccatcaacggcatcgccctgggtggcggcctggaa
atgtgcctggcggcggattaccgcgtcatgaccaccacggccaagatcggcctgccggaa
gtcaagctgggcatctacccaggcttcggcggcaccgtgcgcctgccgcgcctgatcggt
gccgacaatgccatcgagtggattgccgccggcaaggaaaaccgtgctgaagacgcgctg
aaggtcggtgccgtggacgccgtggtcgaacctggcaagctcaaggaagcggcccttgaa
accctcaagcgcgccatcagcggcgagttcgactacaaggccaagcgtcagccgaagctc
gaaaagctcaagctcaacgccatcgaacaaatgatggccttcgaaaccgccaagggtttc
gtggccggtcaggcaggcccgaactacccggcgccggtcgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgcgacaaggctctggaagtcgaggccgccggcttcgtcaag
ctggccaagacctcggctgcgcaaagcctgatcggtctgttcctcaatgaccaggaactg
aagaaaaaggccaaggcttacgacgaaattgccagtgacgtgaagcaggccgccgtgctc
ggcgccggcatcatgggtggcggtatcgcctaccagtcggcgtccaaaggcacgccgatc
ctgatgaaggacatcaacgaacacgggatcgagcagggcctggccgaagccgccaagctg
ctggtcggccgtgtcgacaaaggtcgcatgaccgctgcgaagatggccgaagtgctcaac
ggcattcgtccgaccctgtcctacggcgatttcggccatgtcgacctggtggtcgaagcc
gttgtcgagaacccgaaggtcaagcaggcggtattggctgaagtcgaagacaaggtcaaa
gaggacaccatcctggcctcgaacacctcgaccatctccatttcgctgctggccaaggcc
ctcaagcgtccggagaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgaacatgccgttgccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgactgcccgggctttttggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtggat
ttcgtgcgcatcgacaagatcatggaaaaattcggctggccgatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgacgtcatggccgaaggcttc
ccggaccgcatgaaggacgaccgtcgttcggctgtcgatgtgctctacgaagccaagcgc
ctgggccagaagaacggcaagggcttctacgcctatgagaccgacaagcgcggcaagcag
aagaaagtcgccgactcgtcggtgctggaagtgctcaagccgattgtctacgagcagcgc
gaagtcaccgacgaggacatcatcaactggatgatgatcccgctgtgcctcgaaaccgtg
cgttgcctggaagacggcattgtcgaaaccgccgccgaagccgacatgggtctggtctac
ggtatcggtttccctccattccgtggtggtgcgctgcgctacatcgattcgatcggtgtc
gccgagttcgttgccctggctgaccagtacgctgatttgggcgcgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaacggccagcgcttcttcggttaa
DBGET
integrated database retrieval system
