KEGG   Pseudomonas zeae: HU754_001320
Entry
HU754_001320      CDS       T07528                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pze  Pseudomonas zeae
Pathway
pze03030  DNA replication
pze03410  Base excision repair
pze03420  Nucleotide excision repair
pze03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pze00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HU754_001320 (polA)
   03410 Base excision repair
    HU754_001320 (polA)
   03420 Nucleotide excision repair
    HU754_001320 (polA)
   03440 Homologous recombination
    HU754_001320 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pze03032]
    HU754_001320 (polA)
   03400 DNA repair and recombination proteins [BR:pze03400]
    HU754_001320 (polA)
Enzymes [BR:pze01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HU754_001320 (polA)
DNA replication proteins [BR:pze03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     HU754_001320 (polA)
DNA repair and recombination proteins [BR:pze03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     HU754_001320 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HU754_001320 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc
Other DBs
NCBI-ProteinID: QXI12088
UniProt: A0A9E6NPV1
LinkDB
Position
complement(293498..296302)
AA seq 934 aa
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDEMYAEYKANRPSMPDDMRVQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVIISTGDKDMAQLVDGHITLVNTMSGSSMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYANLDIVPTLPIRGAKTLPAKLEEHKEM
AFLSYQLATIKVDVPLDVELDDLQMGAEDPAKLYELYSLLEFKSWINDLDRDAKRLELSA
ASEPALAGDLFSAPAEEAPAAPAEAAYETILDQARFDVWLEKLNNAKLFAFDTETTGIDA
QQAQLVGLSFAVQANEAAYIPLTHSYIGVPEQLDRDTVLRALKPILEDPSKLKVGQHAKF
DMNILANCAIGGDQSQGINVRGIAFDTMLESYVLNSTATRHDMDSLAQKYLDHTTVSFQD
IAGKGAKQLTFDQIALEQAGPYAAEDADITLRLHQTLFEKLSAIPSLASVLTDIEIPLVP
VLARIERQGAFVDAELLGIQSIELGNKMVALEREAFEIAGEEFNLGSPKQLGVILYEKLG
LPVLKKTAKGQPSTAEEVLAKLAEDDHRLPKVLMEHRSMSKLKSTYTDRLPEQINPRTGR
VHTSYHQAVASTGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIM
AHLSKDEGLMNAFRNNLDVHTATAAEVFKVELNEVTSDQRRGAKAINFGLIYGMGAQKLG
KDIGVDTKTAKAYIDTYFARYPGVREYMDRTRAQAADQGYVETFFGRRLYLPEINSNKPQ
ERAAAERTAINAPMQGTAADIIKKAMVAVDNWLATSGLDAKVILQVHDELVLEVREDLVE
QVSAEIRVHMSEAAKLDVPLLVEVGVGNNWDEAH
NT seq 2805 nt   +upstreamnt  +downstreamnt
atgagccaagcccccctcgtcctggtggacggttcgtcttacctgtaccgcgcctttcac
gcgctgccaccactgaccacctccaaaggcctgccgaccggtgcggtcaaaggcgtgctg
aacatgctcaagagtctgcgcaagcagtacccggacagcccgttcgccgtggtgttcgac
gccaagggcgggacatttcgcgatgaaatgtacgccgaatacaaagccaaccgcccaagc
atgcccgacgacatgcgcgtgcagatcgagccgctgcaccagagcgtgatcgccctcggt
ttcccgctgctgtgcgtggaaggcgtcgaggctgacgacgtgatcggcaccctggcgcgc
agcagcgcggcggcggatcgcccggtgatcatctccaccggcgacaaggacatggcgcaa
ctggtcgatggccacattactttggtcaacaccatgtccggtagctcgatggacgtggag
ggcgttaaggagaaattcggcgtcgctccggagcagatcatcgattatctggcgctgatg
ggcgattcgtctgacaacattccgggcgttcccggcatcggcccaaaaaccgcgtccggc
ctgctggtcggcgtgaatggcggcctcaccgagctgtacgccaatctcgacatcgtgccg
accctgccgattcgcggcgccaagaccctgccagccaagcttgaggagcacaaggagatg
gcgttcctctcctatcaactggcgaccatcaaggtcgacgtgccactggacgttgaactc
gatgatttgcagatgggcgccgaagacccggccaagctctacgaactgtactcgctgctg
gaattcaaaagctggatcaacgatctcgatcgcgacgccaaacgtctggaactgagcgca
gccagcgaacctgcgctggccggcgatctgttcagcgcaccagcggaagaagcgcctgct
gctcccgccgaagctgcctacgaaaccatccttgatcaggcgcgcttcgacgtctggctg
gaaaaactcaacaacgccaagctgttcgccttcgacaccgaaaccaccggcatcgacgcg
cagcaggcgcaactggtcggcctgtcgttcgccgtgcaggccaacgaagccgcgtacatt
ccgctgacccactcctacatcggcgtgccggaacagctggatcgcgacaccgtgctgcgc
gcactcaagccgattctggaagatccgagcaagctcaaggtcggccagcacgcgaagttc
gacatgaacattttggccaactgcgccatcggcggcgatcagagccaaggcatcaacgtg
cgcggcatcgccttcgacacgatgcttgagtcctacgtgctcaactccaccgccacccgc
cacgacatggacagcctcgcgcagaagtacctggaccacaccaccgtgagcttccaggac
atcgccggcaaaggcgccaagcagctgaccttcgaccagatcgccctggaacaggccggg
ccgtacgccgccgaagacgctgatatcaccctgcgcctgcaccagactttgtttgaaaag
ctcagcgcgatcccgagcctggccagcgtgctgaccgacatcgagattccgctggtgccc
gttctcgcccgcatcgagcgccaaggcgcgttcgttgacgctgagttgctcggcattcag
agcatcgagctgggcaacaaaatggtcgcgctggagcgcgaagccttcgagatcgccggg
gaagaattcaatcttggctcgccgaagcagttgggcgtgattctctacgagaaactcggc
ctgccagtattgaagaagaccgccaagggccaaccgtccaccgctgaagaagtgctagcg
aagctcgctgaagacgatcaccgcttgccgaaggtgctgatggagcaccggtcgatgagc
aagctgaaaagcacctacaccgatcgcctgccggagcagatcaatccgcgcaccgggcgt
gtccacacctcgtatcaccaggctgtggcatcgaccgggcgtttgtcctcgagcgatcca
aacctgcagaacatcccggtgcgcaccgcggaaggccggcgcatccgtcaggcgttcgtc
gcgccaaagggctacaaactgctggcggcggactattcgcagatcgaactgcgaatcatg
gcgcacctgtccaaggacgaaggcctgatgaatgccttccgcaacaatctggacgtgcac
accgccaccgctgccgaagtgttcaaggtcgagctcaatgaagtgacctccgaccagcgc
cgtggcgccaaagcgatcaactttggcctgatctacggcatgggcgcacaaaaactcggc
aaggacatcggcgtcgataccaagaccgccaaggcttacatcgatacctacttcgcccgt
tatccgggggttcgcgaatacatggatcgcacccgcgcgcaggcagcggatcagggttat
gtcgagacgtttttcggtcgtcgtctgtacctgccggagatcaactcgaacaagccgcag
gaacgcgccgctgccgagcgcacagcgatcaacgcgccgatgcagggcacggctgccgac
atcatcaagaaagccatggtggcggtggataactggctggcgacatccgggctggacgcc
aaagtcatcctgcaggtgcacgatgaactggtgctggaggttcgtgaggatctggtcgaa
caagtcagtgccgagattcgcgtgcacatgagcgaggcggcgaaactggatgtcccgctg
ctggtcgaagtgggtgtgggcaacaattgggatgaggctcactga

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