Pseudomonas zeae: HU754_007460
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Entry
HU754_007460 CDS
T07528
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pze
Pseudomonas zeae
Brite
KEGG Orthology (KO) [BR:
pze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pze03009
]
HU754_007460 (rimO)
Enzymes [BR:
pze01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HU754_007460 (rimO)
Ribosome biogenesis [BR:
pze03009
]
Prokaryotic type
ribosomal protein modification factors
HU754_007460 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QXI13243
UniProt:
A0A9E6NS12
LinkDB
All DBs
Position
complement(1692040..1693377)
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AA seq
445 aa
AA seq
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MSTTPAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLAVTGPQQYEQVVNAVHEVVP
PRKDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKNWREICPD
LIIRSTFIVGFPGETEEDFQYLLNWLTEAQLDRVGCFQYSPVEGAPANDLDLEIVPDDVK
QDRWDRFMAHQQAISSARLQMRIGREIEVLVDEVDEQGAVGRCFFDAPEIDGNVFIDNGS
NLKPGDKVWCKVTDADEYDLWAEQI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactcctgcgccggccaatccaaaggttggctttgtatctctgggttgcccg
aaagcactggtcgactccgagcgcatcctgacccagctgcgcatggaaggctatgacgtg
gtgtccacctatcaggacgccgacgtggtcgtggtcaatacctgcggtttcatcgattcg
gccaaggctgagtcgctggaagtgatcggcgaagcgatcaaggaaaacggcaaggtgatc
gtcaccggttgcatgggcgtggaagaaggcaatatccgcaacgtgcacccgagcgtgctg
gccgtgaccggtccgcagcagtacgagcaagtggtcaacgccgtgcacgaagtggtgccg
ccgcgtaaagatcacaacccgctgatagacctggtgccgccgcaaggcatcaaactgacc
ccgcgccactacgcctacctgaagatctccgaaggctgcaaccacagctgctccttctgc
atcatcccgtcgatgcgcggcaaactggtcagccgtccggtcggtgatgtactcgacgaa
gctcagcgcctggtcaaatccggcgttaaagagctgttggtgatctcgcaagacaccagc
gcctacggcgttgacgtgaaataccgcaccggcttctggaacggcgcgccggtgaaaacc
cgcatgaccgaactctgcgaagcgctgagcaccctcggcgtctgggtccgtctgcactac
gtttacccgtacccgcacgttgacgagctgatcccgctgatggctgccggcaagatcctg
ccgtacctggacatcccgttccagcacgccagcccgaaagtcttgaagtcgatgaaacgc
ccggcgttcgaagacaagaccctggcgcggatcaagaactggcgcgaaatctgcccggac
ctgatcatccgttcgaccttcatcgtcggcttcccgggcgaaaccgaagaagacttccag
tacctgttgaactggctgaccgaagcccagctcgaccgcgttggctgcttccagtactcg
ccggttgaaggcgctccggccaatgatctggatctggagatcgtaccggacgacgtcaag
caggaccgttgggatcgcttcatggcacaccagcaagcgatcagctcggcgcgtctgcaa
atgcgtattggccgtgaaattgaagtgctggtcgacgaagttgatgagcaaggcgcggtt
ggccgctgcttcttcgatgcaccggaaatcgacggtaacgtgtttattgataacggcagc
aatttgaagcctggcgacaaggtctggtgcaaggttactgacgctgacgaatatgacctg
tgggctgagcagatctaa
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integrated database retrieval system
