Qipengyuania aurantiaca: K3148_02505
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Entry
K3148_02505 CDS
T09825
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
qar
Qipengyuania aurantiaca
Brite
KEGG Orthology (KO) [BR:
qar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qar03009
]
K3148_02505 (rimO)
Enzymes [BR:
qar01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
K3148_02505 (rimO)
Ribosome biogenesis [BR:
qar03009
]
Prokaryotic type
ribosomal protein modification factors
K3148_02505 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QZD90293
LinkDB
All DBs
Position
514328..515704
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AA seq
458 aa
AA seq
DB search
MNTPTTPIPDQKKVGMVSLGCPKALVDSERILTRLRADGYAMSPDYAGADVVLVNTCGFL
DSAKEESLQAIGEAIAENGRVIVTGCMGEEADAIRAAHPSVLAVTGAHQYEAVVEAVHEH
APPSQGPYIDLIPQPDVKLTPRHYSYLKISEGCNHSCAFCIIPDLRGKLASRRIDAVLRE
AEKLVAAGTKELLVISQDTSAYGVDTRHESKPWKGREVRAHMTDLARELGQLDIGGGMPP
WVRLHYVYPYPHVDAVIPLMAEGLLTPYLDIPFQHASPKVLRAMKRPANEAKVLERLKGW
REICPEIAIRSSFVVGFPGETEDDFKYLLDWLEEAQLDRVGAFRFEPVEGAQANHLPDPV
PEEIKEERYARVMEVTERISAAKLQAKVGRSIPVIIDEVGEPDEDGDIGATGRSQADAPE
IDGAVYLRNVPGTLETGDIVTVEVEDADAHDLYGVVAG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccccaccaccccgatccccgaccagaagaaggtcggcatggtttccctcggc
tgccccaaggcgctggtcgacagcgaacgcatcctcacgcgcctgcgcgccgatggctat
gcgatgagccccgattacgccggcgcggacgtggtgctggtgaacacctgcggcttcctc
gattcggccaaggaagaaagcctgcaggcgatcggtgaggccattgccgaaaacggccgc
gtgatcgtaaccggctgcatgggcgaggaagccgatgccatccgcgccgcgcatcccagc
gtcctcgccgtgaccggcgcgcaccaatacgaggccgtcgtcgaagccgtacacgagcac
gccccgccaagccagggtccgtatatcgaccttatccctcagccggacgtgaaactgacg
ccgcggcactacagctatctgaagatttccgagggctgtaaccactcctgcgccttctgc
atcatcccggacctgcgcgggaagctcgccagccgccggatcgatgcggtcctgcgcgaa
gcggagaagctggtcgccgccggcacgaaggaactgctggtcatcagccaggacaccagc
gcctatggtgtcgacacacggcacgagagcaagccgtggaagggccgcgaagtgcgcgcg
cacatgaccgatctcgcgcgcgaactgggccagctcgacatcggtggcggtatgccgccg
tgggtgcggctgcactacgtctacccctatccgcatgtcgacgcggtgatcccgctgatg
gccgaagggctgctgacgccctatctcgacattcccttccagcacgccagcccaaaggtc
ctgcgcgcgatgaaacgcccggcgaacgaggccaaggtgctcgaacgcctcaagggctgg
cgcgagatctgccccgagatcgcgatccgctccagcttcgtggtcggcttcccgggcgag
accgaagacgatttcaagtatctgctcgactggctggaagaagcccagctcgaccgcgtc
ggcgcgttccgcttcgaaccggtcgaaggcgcgcaggccaatcacctgcccgatcccgtg
ccggaagagatcaaggaagaacgttacgcccgcgtcatggaagtgaccgagcggatcagc
gccgccaagctgcaggcgaaggtcggtcgttcgatccccgtcatcatcgacgaagtgggc
gagccggacgaggatggcgatatcggcgcgaccggtcgcagccaggccgacgcgcccgaa
atcgacggtgcggtttacctgcgaaacgtgcccggaacgctcgaaaccggcgatatcgtg
accgttgaagtcgaggatgccgacgcccacgacctttacggtgtcgtcgcgggctga
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