Qipengyuania citrea: NCF85_01550
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Entry
NCF85_01550 CDS
T08274
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
qci
Qipengyuania citrea
Brite
KEGG Orthology (KO) [BR:
qci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qci03009
]
NCF85_01550 (rimO)
Enzymes [BR:
qci01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NCF85_01550 (rimO)
Ribosome biogenesis [BR:
qci03009
]
Prokaryotic type
ribosomal protein modification factors
NCF85_01550 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
USA61694
LinkDB
All DBs
Position
complement(318137..319513)
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AA seq
458 aa
AA seq
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MTTTTTPIPDQKKVGMVSLGCPKALVDSERILTRLRADGYAMSQDYAGADVVLVNTCGFL
DSAKEESLAAIGEAIAENGRVIVTGCMGEEADAIRAAHPQVLAVTGAHQYEQVVDAVHTY
APPSQGPYVDLIPQPDIKLTPRHYSYLKISEGCNHSCAFCIIPDLRGKLASRRIDAVLRE
AEKLVAAGTKELLVISQDTSAYGVDTRHETRTWKGRDVRAHMTDLARELGQLDIGGGTPP
WVRLHYVYPYPHVDAVIPLMAEGLLTPYLDIPFQHASPKVLRAMKRPANEAKVLERLKGW
REICPEIAIRSSFVVGFPGETEEDFQYLLDWLEEAQLDRVGAFRFEPVDGAQANNLPDPV
PESVKEDRYARIMEVTERISAAKLRDKIGKSIPVIIDEVGEPDEDGDIGATGRSQADAPE
IDGAVYLRNVRPDLSAGDIVDVLIEDSDAHDLFGAACA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccactaccaccccgatccccgaccagaagaaggtcggtatggtttccctcggc
tgcccgaaagcgctggtcgacagcgaacgcattcttacccgtctacgcgcggacggttat
gcaatgagccaggattacgccggtgccgatgtggtccttgtgaatacatgcggctttctc
gattcggccaaggaagaaagccttgctgccatcggcgaagcaatcgcggaaaatggtcgt
gtgatcgtgaccggctgcatgggcgaggaggccgacgccatccgcgctgcccatccgcag
gtcctcgccgtgacaggtgcgcatcagtacgaacaggtggtggacgcggttcatacctat
gccccgccctcccaaggtccgtatgtcgacctgatcccccagccggatatcaaactgacg
ccgcgccattacagctatctgaagatctccgagggctgcaaccactcctgcgccttctgc
atcattccggatctgcggggcaagctagccagccgcaggatcgatgcggtgctgcgcgaa
gcagagaagctggttgccgcaggaacgaaggaactgcttgtcatcagtcaggataccagc
gcctacggtgtcgacacacgccacgaaacccgcacctggaagggtcgtgatgttcgtgcg
catatgaccgatcttgcgcgggaactgggacagctcgacattggcggcggcacccctccg
tgggttcggctgcattacgtgtacccctacccccatgtagatgcggtcattccgctcatg
gccgaagggttgctgacgccgtatctcgacataccctttcaacatgcgagccccaaggtc
cttcgcgcaatgaagcgtcctgccaatgaggcgaaggtgctggaacgcttgaagggctgg
cgggaaatttgtcctgaaatcgctattcgttctagctttgtcgtcggcttccctggagaa
accgaagaggatttccagtacctgctcgactggctggaagaggctcaactggaccgtgtg
ggcgcattccggttcgaacctgtcgatggtgcacaggccaacaatctgcctgacccggtg
ccggaatccgtcaaagaagaccgctatgcccgcatcatggaagtgactgagcgtatcagt
gccgccaagcttcgcgacaagatcggcaaatcgatccccgtgataatcgacgaggttggc
gagcccgacgaagatggcgacattggcgcaaccggtcgcagccaagccgacgcgccagaa
atcgacggcgcggtttaccttcgcaatgtacgtccagacctatcggcaggcgacatcgtg
gatgttttgatcgaagatagcgatgcgcatgatcttttcggagcagcctgcgcctaa
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