Quercus lobata (valley oak): 115957870
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Entry
115957870 CDS
T07350
Name
(RefSeq) ABC transporter B family member 20
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115957870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
qlo02000
]
115957870
04147 Exosome [BR:
qlo04147
]
115957870
04090 CD molecules [BR:
qlo04090
]
115957870
Enzymes [BR:
qlo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
115957870
Transporters [BR:
qlo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
115957870
Exosome [BR:
qlo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115957870
CD molecules [BR:
qlo04090
]
Proteins
115957870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_15
Zeta_toxin
AAA_22
AAA_16
RsgA_GTPase
HupE_UreJ
AAA_30
DUF87
Motif
Other DBs
NCBI-GeneID:
115957870
NCBI-ProteinID:
XP_030932070
LinkDB
All DBs
Position
8:58671605..58684053
Genome browser
AA seq
1402 aa
AA seq
DB search
MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDQSADTAAQQLEQEDEIDEPEEIEP
PPAAVPFSRLFACADNLDWALMFVGSFAAAAHGTALVVYLHYFAKIVHVLSIRPNNDGYQ
QLQLDKLGELTLTILYIAVGVFGAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFD
TYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGFVNCWQIALITLGTGP
FIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQA
TLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLITHGKAHGGEIITALFAIILSGL
GLNQAATNFYSFDQGRIAAYRLFEMISRSSSAVNQDGTTPGSVQGNIEFRNVYFSYLSRP
EIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEW
LRSQIGLVTQEPALLSLSIRDNIAYGRDATCDQIEEAAKIAHAHTFISSLGRGYDTQVGR
AGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAEKAVQEALDLLMLGRSTIIIA
RRLSLIRNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLKCEEAAKIPRRIPLRNYKET
AAFQIEKDSSASNSFQEPSSPKMVKSPSLQRASGMFRSSESTFNSQESPKARSPPPEKML
ENGQPMDAADKEPSIRRQDSFEMRLPELPKIDVQAAHRQTSNGSDPESPVSPLLTSDPKN
ERSHSQTFSRPHSQAGDTPVKVKEAKNTRIREAPSFWRLAELSLAEWLYAVLGSTGAAIF
GSFNPLLAYVIALIVTAYYVEEHHHLGREVNKLCLIIACMGVVTVVANFLQHFYFGIMGE
KMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSAA
VLVAVLIGMLLQWRLALVALATLPILTLSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVR
NIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGMAIGFAFGFSQFLLFACNALLLWYTAY
SVKYNYMDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIEPDD
NTALKPPNVYGSIELKNIDFCYPTRPEMLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISL
IQRFYDPVAGQVLLDGRDLKLYNLRWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAE
MKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASS
SIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGSHDSLVAK
NGLYVRLMQPHFGKGLRQHRLV
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgatgatctctaggggactgttcgggtggtccccgccgcacatacagccgttaacgccc
gtgtccgaggtgtccgagccgcccgagtcgccgtcgccgtacctcgaccagagcgcggac
acggcggctcagcagctcgagcaggaggacgagatcgacgagcccgaggagatcgagccg
cctccggccgccgtgcctttctccaggctcttcgcttgcgccgacaacctcgactgggcg
ctcatgttcgtcggctccttcgccgccgccgctcacggcaccgccctcgtcgtttacctt
cactacttcgcgaagatcgtccacgtcctcagtatccgtcctaacaatgatggatatcaa
caactacagctcgataagcttggggagcttactttaacaatcctgtatattgctgtgggt
gttttcggtgctggttggattgaggtgtcatgctggattttgactggggaaaggcagact
gctgtcatcaggtcaaagtatgtgcaagtattacttaaccaagacatgagtttttttgat
acctatgggaacaacggggacattgtgagtcaagtattgagtgatgtgttacttattcaa
tctgctcttagtgaaaaagttggaaattatattcataatatggctacatttttcagtggt
cttgttattggatttgtcaactgttggcagattgcacttataacattaggcactggtcca
ttcattgtagccgctggaggaatatcaaatatatttcttcacaggcttgctgagaatatt
caagatgcatatgctgaagcagctagcattgctgaacaggcagtctcctacattagaacg
ttatatgcatttacaaatgaaacattggcaaagtattcttatgcaacgtcactacaagca
actctgagatatggtatattaataagccttgtgcaaggacttggtcttggattcacatat
gggcttgcaatatgttcttgtgccttacaactgtgggttggaaggttcctaattacacat
ggaaaagctcatggtggtgaaattataacagctctatttgctataattttaagtggcctt
gggctgaatcaagctgcaacaaacttctattcatttgaccaagggcgaattgctgcttat
agactttttgagatgataagccgatcatcctctgcagttaatcaagatggaactacccca
ggttcagtgcaaggaaatatcgagtttaggaatgtatatttcagctatctgtctcgtcct
gaaatccctattttgagtgggttttacctcactgtacctgctaagaaagcagtggcactt
gttggcagaaatggctctggaaaaagcagtattatcccacttatggagcggttttatgat
cctacattaggagaagttctcttggatggggaaaatattaagaacctgaaactggaatgg
ctaagaagccaaattggactagttacccaggaacctgctttgctaagtttgagtataaga
gacaatattgcttacgggagggatgctacctgcgatcaaattgaagaagctgctaaaata
gcacatgcacatacttttattagttcacttgggagaggatatgatacacaggtgggtagg
gctggattagcattaacagaagagcagaaaataaaactttctattgctagagcagtgctt
ctaaatccatcaattcttctgcttgatgaagttactggtggacttgattttgaagctgaa
aaagctgttcaggaggctctagatctcctcatgttgggacgctcaacaataataatagct
cggcggcttagtcttataaggaatgctgattacatagctgttatggaagagggtcaactt
gtagaaatgggtacacatgatgaattactaaccttggatggcctttatgcagagcttctc
aaatgcgaagaggctgcgaaaattcctaggaggattcccttgagaaactacaaggagact
gcagctttccaaattgaaaaggattcttcagcaagtaatagcttccaagaaccatcatct
cctaaaatggtcaaatcaccctctctccaaagagcttctggcatgttccggtcctcagag
agcacctttaactcacaggaatcacccaaagctaggagcccaccaccagagaagatgctg
gaaaatggtcagcctatggatgcagcagataaggaaccttcaatcagaaggcaggatagt
tttgaaatgagactaccagagttacccaagattgatgtacaggctgcacatcgacaaaca
tcaaatggttcagatcctgaatcccctgtttcaccccttttgacatctgatcccaaaaat
gaacgttcccattcacagacttttagtcgaccgcatagtcaagctggtgatactccagtg
aaagtgaaggaagcaaaaaatacacggattcgggaagcaccatcattttggaggttggca
gaacttagtcttgcagagtggctttatgctgtgttaggaagcactggtgctgctatcttc
ggatcttttaatccccttcttgcttatgttattgcactgatagtcacagcatactatgtt
gaagaacatcatcacttgggacgtgaagtaaacaaattgtgtttgatcattgcctgcatg
ggtgtggtaacagtggttgccaatttcttgcagcacttctactttggtataatgggggag
aagatgactgaacgagtgcgtagaatgatgttctcagcaatgttgcgcaatgaagttgga
tggtttgatgaagaggaaaatagtgctgacaccttatccatgcgcttggcaaatgatgct
acatttgtgcgagctgcttttagcaacaggctttccatatttatacaggacagtgctgct
gttcttgtggctgttctaatcgggatgttgctgcaatggcgattagcacttgtggcgttg
gcaaccctgccaattctcactctttccgctattgcacagaaattgtggcttgctggattt
tcgaggggtatccaggagatgcacaggaaggcatctttagtccttgaggatgcagttaga
aacatatacactgttgtagcattctgtgctggtaacaaggtaatggagctctacaggttg
caactgaagaaaatattcaagcagagtttccttcatggaatggccataggttttgcattt
ggcttttcacagtttttactttttgcctgtaatgcccttctcctctggtacactgcatac
tccgtaaagtacaactatatggacctacctactgctctcaaggagtatatggttttctct
tttgctacatttgcactggtggagccttttggattggctccgtacatacttaaacgacgt
aaatctcttatttcagtatttgagatcatagatcgagtgcctaagattgaaccagatgat
aacacggcattaaagccacctaatgtttatggaagcattgagttgaaaaatatcgatttc
tgttatcccactcgcccagaaatgttggtgttgagcaatttcagtcttaaagtgaatggg
gggcaaactgtagctgttgtgggagtttcagggtctggaaagagtaccataatctctttg
attcagagattttatgatccagttgctggtcaagtactactggatggacgagatttgaaa
ctttataatttgagatggttgaggagccacctgggtcttgttcagcaggaaccaattata
ttctcaacaaccattagggaaaatattatatatgctaggcacaatgctagtgaagctgag
atgaaagaggctgcgagaatagcaaatgcacaccatttcatcagcagcttgcctcatggt
tatgacacacatgtgggaatgaggggtgtggatctgactccaggacagaaacagagaatt
gcaattgctcgggtagtgctaaagaatgcacccatcttgttattagatgaagcaagctca
tccattgagtctgagtcaagtcgggtggtgcaggaggctctagatacattgatcatgggg
aacaaaacaaccattctgatagcccacagggctgcaatgatgaggcatgtggacaatatt
gtagttctaaatgggggacgaattgtagaggaagggagccatgattctttggtggcaaag
aatggtctttatgtccgtttgatgcaacctcatttcggaaaaggtttgcgtcagcaccga
ctcgtttag
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