KEGG   Quercus lobata (valley oak): 115960027
Entry
115960027         CDS       T07350                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03020  RNA polymerase
qlo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115960027
  09124 Replication and repair
   03420 Nucleotide excision repair
    115960027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qlo03021]
    115960027
   03400 DNA repair and recombination proteins [BR:qlo03400]
    115960027
Transcription machinery [BR:qlo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     115960027
  RNA polymerase III system
   RNA polymerase III
     115960027
  RNA polymerase I system
   RNA polymerase I
     115960027
DNA repair and recombination proteins [BR:qlo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      115960027
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 115960027
NCBI-ProteinID: XP_030934585
LinkDB
Position
9:14891087..14895639
AA seq 143 aa
MADEDYNDLDMGYEDEPPEPEIEEGAEEDLENNANEDVPGDLVEGEDKEEPEPVERPRKT
SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKVPFTIRRYLPDG
SYEDWGVDELIVEDSWKRQVGGD
NT seq 432 nt   +upstreamnt  +downstreamnt
atggccgatgaagattacaatgatttggacatgggatatgaggatgagccaccagagcct
gagatcgaggaaggtgcagaggaggatctagagaataatgccaatgaagacgttcctgga
gacctcgttgaaggtgaggataaagaagagccggaaccagttgaacgtcctcgtaagacc
tctaaatatatgacaaaatatgagcgcgctagaatattgggtacccgtgctctgcagatc
agtatgaatgcacctgtgatggtcgagttggagggtgaaactgatccacttgagattgca
atgaaggagcttcgtcagcggaaagtacccttcaccatccgccgctacctgccagatgga
agttatgaagactggggagttgatgaattgattgtggaagactcatggaagaggcaagtg
gggggcgattga

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