Quercus lobata (valley oak): 115960936
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Entry
115960936 CDS
T07350
Name
(RefSeq) protein EXPORTIN 1A
KO
K14290
exportin-1
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03008
Ribosome biogenesis in eukaryotes
qlo03013
Nucleocytoplasmic transport
qlo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115960936
03008 Ribosome biogenesis in eukaryotes
115960936
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115960936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
qlo03019
]
115960936
03009 Ribosome biogenesis [BR:
qlo03009
]
115960936
03016 Transfer RNA biogenesis [BR:
qlo03016
]
115960936
03036 Chromosome and associated proteins [BR:
qlo03036
]
115960936
Messenger RNA biogenesis [BR:
qlo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
115960936
Ribosome biogenesis [BR:
qlo03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
115960936
Pre-60S particles
115960936
Transfer RNA biogenesis [BR:
qlo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
115960936
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
115960936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
Adaptin_N
DUF3385
Motif
Other DBs
NCBI-GeneID:
115960936
NCBI-ProteinID:
XP_030935832
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Position
9:24689913..24702579
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AA seq
801 aa
AA seq
DB search
MYSIFMVQLQVILPSTTNIPEAYAHGSSEEQAFIQNLALFFTSFYKFHIRVLEATQENIT
ALLMGLEYLTNISYVDDTEVFKVCLDYWNSLVLELFESHHNIDNPAVAAANMMGLQMPML
PGMVDGIGSQILQRRQLFAIPMSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVL
VQYKIMRETLIYLSHLDHEDTEKQMLKKLSKQLSGEDWTWNNLNTLCWAIGSISGSMMEE
QENRFLVMVIRDLLNLCEITKGKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFE
FMHETHPGVQDMACDTFLKIVQKCKRKFVIVQVGENEPFVSELLTGLPTTIADLEPHQIH
TFYESVGHMIQAESDPQKRDEYLQRLMELPNQKWVEIIGKARQSVDFLKDQDVIRTVLNI
LQTNTSVANSLGTYFLSQISLIFLDMLNVYRMYSELISSSIAEGGPFASKTSYVKLLRSV
KRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNLPDARESEVLSLFATIINKY
KAAMIDDVPRIFEAVFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQL
KLVMDSIIWAFRHTERNIAETGLNLLLEMLKNFQNSEFCNQFYQSYFLQIEQEIFAVLTD
TFHKPGFKLHVLVLQHLFCLVESGGLTEPLWDVATVPYPYPNNTMFVREYTIKLLSTSFP
NMTAAEVTQFVNGLFESRNELSAFKNHIRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQ
RMLSIPGLIAPNEIQDEMLDS
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtatcttcatggtgcagttacaggttattctcccctctactacaaacatccct
gaggcttatgcacatggaagtagtgaggaacaagcatttattcagaacttggcactgttt
ttcacttcattttacaagtttcatattcgagtgctagaagctactcaagagaatataact
gctttgctaatgggtcttgaatatcttactaacatctcgtatgtggatgacactgaggtt
tttaaggtttgcttggattactggaattccttggttttggaactgtttgaatcacaccat
aacattgataatcctgcagtagcagctgcaaatatgatgggactgcagatgccgatgctt
cctggtatggttgatggcattggttcacaaattcttcagaggcggcagctttttgccatt
ccaatgtcaaagttaagaatgcttatgatttgtcgaatggctaagcctgaagaggttctc
atagttgaagatgaaaatgggaatattgttcgtgagaccatgaaggacaatgatgttctt
gttcaatacaagataatgagggagactcttatctatttgtctcatcttgatcatgaggac
actgaaaagcagatgttgaagaaactaagtaagcaattgagtggcgaggattggacttgg
aacaacttgaacacattatgctgggcaataggatctatatctggctccatgatggaggaa
caggaaaacagattcttggtgatggtcattcgtgatttattgaatttatgtgaaatcaca
aaagggaaagataataaagctgttattgctagtaacattatgtatgttgttgggcagtac
ccaaggtttttaagagcccattggaaattcttgaaaactgttgtgaataagttgtttgag
ttcatgcatgagactcatccaggagttcaggatatggcctgtgacacattcttgaaaatt
gttcagaagtgcaagcggaagtttgtaattgtacaggttggagagaatgaaccatttgtc
tctgaacttctaacaggccttccgacaaccatagctgatcttgagccacaccagattcat
acgttctatgaatctgttggtcacatgatacaagcggaatctgatccccagaagcgggat
gaataccttcagaggttgatggagctcccaaatcagaaatgggttgagatcatagggaag
gcgcgtcaaagtgttgatttcctgaaggatcaagacgtaatccggactgtgcttaatata
ttgcagacaaatactagcgttgccaattcacttggaacatattttttatctcaaatttct
ctgatctttttggacatgcttaacgtttacagaatgtacagtgagcttatatcaagtagc
attgcagaaggagggccctttgcatctaaaacatcctatgtgaaacttttacggtcggtt
aaaagagagactcttaagctcattgagacattcttggacaaggcagaagatcaaccacaa
attggaaaacaatttgtgcccccaatgatggatcccgttcttggtgactatgctaggaac
ttgcctgatgctagggaatcagaagttctctcactttttgccacaataataaataagtat
aaagctgcaatgattgatgatgtgcctcgcatatttgaagcagttttccaatgcacattg
gagatgatcacaaaaaattttgaagattacccagagcatcggctcaagtttttttcatta
cttcgtgcaattgctacacattgttttcctgcattgattcgtttatcaagtcagcaactg
aagcttgtcatggattccattatatgggcatttcggcacacagaaaggaatattgctgaa
actgggctgaatcttttattggagatgctaaagaactttcagaattccgagttttgtaat
caattctaccagtcatactttttgcaaattgagcaagaaatatttgctgtattgacggac
acctttcataaacctggtttcaagttgcatgtcttggtgctacaacacttgttttgcctg
gtggagtctggtgggttgacggagccgttgtgggatgttgccacagttccttatccatat
ccaaacaacacgatgtttgttcgtgagtacacaataaaacttctgagcacttcattcccc
aacatgactgcagcagaggtcacgcaatttgtgaatggactgtttgagtcaagaaatgag
ctctctgcatttaaaaatcatataagagactttcttgtgcagtcaaaagagttttcagct
caggacaacaaagacctttatgcagaggaggctgctgctcagagagaaagagagcgacag
cggatgctttccattccagggcttattgcacccaatgagatacaagatgagatgttggac
tcataa
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