KEGG   Quercus lobata (valley oak): 115960936
Entry
115960936         CDS       T07350                                 
Name
(RefSeq) protein EXPORTIN 1A
  KO
K14290  exportin-1
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03008  Ribosome biogenesis in eukaryotes
qlo03013  Nucleocytoplasmic transport
qlo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115960936
   03008 Ribosome biogenesis in eukaryotes
    115960936
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115960936
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:qlo03019]
    115960936
   03009 Ribosome biogenesis [BR:qlo03009]
    115960936
   03016 Transfer RNA biogenesis [BR:qlo03016]
    115960936
   03036 Chromosome and associated proteins [BR:qlo03036]
    115960936
Messenger RNA biogenesis [BR:qlo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     115960936
Ribosome biogenesis [BR:qlo03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    115960936
  Pre-60S particles
    115960936
Transfer RNA biogenesis [BR:qlo03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    115960936
Chromosome and associated proteins [BR:qlo03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     115960936
SSDB
Motif
Pfam: CRM1_C CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat Adaptin_N DUF3385
Other DBs
NCBI-GeneID: 115960936
NCBI-ProteinID: XP_030935832
LinkDB
Position
9:24689913..24702579
AA seq 801 aa
MYSIFMVQLQVILPSTTNIPEAYAHGSSEEQAFIQNLALFFTSFYKFHIRVLEATQENIT
ALLMGLEYLTNISYVDDTEVFKVCLDYWNSLVLELFESHHNIDNPAVAAANMMGLQMPML
PGMVDGIGSQILQRRQLFAIPMSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVL
VQYKIMRETLIYLSHLDHEDTEKQMLKKLSKQLSGEDWTWNNLNTLCWAIGSISGSMMEE
QENRFLVMVIRDLLNLCEITKGKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFE
FMHETHPGVQDMACDTFLKIVQKCKRKFVIVQVGENEPFVSELLTGLPTTIADLEPHQIH
TFYESVGHMIQAESDPQKRDEYLQRLMELPNQKWVEIIGKARQSVDFLKDQDVIRTVLNI
LQTNTSVANSLGTYFLSQISLIFLDMLNVYRMYSELISSSIAEGGPFASKTSYVKLLRSV
KRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNLPDARESEVLSLFATIINKY
KAAMIDDVPRIFEAVFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQL
KLVMDSIIWAFRHTERNIAETGLNLLLEMLKNFQNSEFCNQFYQSYFLQIEQEIFAVLTD
TFHKPGFKLHVLVLQHLFCLVESGGLTEPLWDVATVPYPYPNNTMFVREYTIKLLSTSFP
NMTAAEVTQFVNGLFESRNELSAFKNHIRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQ
RMLSIPGLIAPNEIQDEMLDS
NT seq 2406 nt   +upstreamnt  +downstreamnt
atgtatagtatcttcatggtgcagttacaggttattctcccctctactacaaacatccct
gaggcttatgcacatggaagtagtgaggaacaagcatttattcagaacttggcactgttt
ttcacttcattttacaagtttcatattcgagtgctagaagctactcaagagaatataact
gctttgctaatgggtcttgaatatcttactaacatctcgtatgtggatgacactgaggtt
tttaaggtttgcttggattactggaattccttggttttggaactgtttgaatcacaccat
aacattgataatcctgcagtagcagctgcaaatatgatgggactgcagatgccgatgctt
cctggtatggttgatggcattggttcacaaattcttcagaggcggcagctttttgccatt
ccaatgtcaaagttaagaatgcttatgatttgtcgaatggctaagcctgaagaggttctc
atagttgaagatgaaaatgggaatattgttcgtgagaccatgaaggacaatgatgttctt
gttcaatacaagataatgagggagactcttatctatttgtctcatcttgatcatgaggac
actgaaaagcagatgttgaagaaactaagtaagcaattgagtggcgaggattggacttgg
aacaacttgaacacattatgctgggcaataggatctatatctggctccatgatggaggaa
caggaaaacagattcttggtgatggtcattcgtgatttattgaatttatgtgaaatcaca
aaagggaaagataataaagctgttattgctagtaacattatgtatgttgttgggcagtac
ccaaggtttttaagagcccattggaaattcttgaaaactgttgtgaataagttgtttgag
ttcatgcatgagactcatccaggagttcaggatatggcctgtgacacattcttgaaaatt
gttcagaagtgcaagcggaagtttgtaattgtacaggttggagagaatgaaccatttgtc
tctgaacttctaacaggccttccgacaaccatagctgatcttgagccacaccagattcat
acgttctatgaatctgttggtcacatgatacaagcggaatctgatccccagaagcgggat
gaataccttcagaggttgatggagctcccaaatcagaaatgggttgagatcatagggaag
gcgcgtcaaagtgttgatttcctgaaggatcaagacgtaatccggactgtgcttaatata
ttgcagacaaatactagcgttgccaattcacttggaacatattttttatctcaaatttct
ctgatctttttggacatgcttaacgtttacagaatgtacagtgagcttatatcaagtagc
attgcagaaggagggccctttgcatctaaaacatcctatgtgaaacttttacggtcggtt
aaaagagagactcttaagctcattgagacattcttggacaaggcagaagatcaaccacaa
attggaaaacaatttgtgcccccaatgatggatcccgttcttggtgactatgctaggaac
ttgcctgatgctagggaatcagaagttctctcactttttgccacaataataaataagtat
aaagctgcaatgattgatgatgtgcctcgcatatttgaagcagttttccaatgcacattg
gagatgatcacaaaaaattttgaagattacccagagcatcggctcaagtttttttcatta
cttcgtgcaattgctacacattgttttcctgcattgattcgtttatcaagtcagcaactg
aagcttgtcatggattccattatatgggcatttcggcacacagaaaggaatattgctgaa
actgggctgaatcttttattggagatgctaaagaactttcagaattccgagttttgtaat
caattctaccagtcatactttttgcaaattgagcaagaaatatttgctgtattgacggac
acctttcataaacctggtttcaagttgcatgtcttggtgctacaacacttgttttgcctg
gtggagtctggtgggttgacggagccgttgtgggatgttgccacagttccttatccatat
ccaaacaacacgatgtttgttcgtgagtacacaataaaacttctgagcacttcattcccc
aacatgactgcagcagaggtcacgcaatttgtgaatggactgtttgagtcaagaaatgag
ctctctgcatttaaaaatcatataagagactttcttgtgcagtcaaaagagttttcagct
caggacaacaaagacctttatgcagaggaggctgctgctcagagagaaagagagcgacag
cggatgctttccattccagggcttattgcacccaatgagatacaagatgagatgttggac
tcataa

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