KEGG   Quercus lobata (valley oak): 115963099
Entry
115963099         CDS       T07350                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 12
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
qlo  Quercus lobata (valley oak)
Pathway
qlo03020  RNA polymerase
qlo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:qlo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115963099
  09124 Replication and repair
   03420 Nucleotide excision repair
    115963099
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qlo03021]
    115963099
   03400 DNA repair and recombination proteins [BR:qlo03400]
    115963099
Transcription machinery [BR:qlo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     115963099
  RNA polymerase III system
   RNA polymerase III
     115963099
  RNA polymerase I system
   RNA polymerase I
     115963099
DNA repair and recombination proteins [BR:qlo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      115963099
SSDB
Motif
Pfam: DNA_RNApol_7kD YjdM_Zn_Ribbon TF_Zn_Ribbon DUF5816 zinc_ribbon_13 Prok-RING_1 HypA
Other DBs
NCBI-GeneID: 115963099
NCBI-ProteinID: XP_030937851
LinkDB
Position
10:complement(46167259..46172663)
AA seq 51 aa
MDPPPEQVNYICGDCGMENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
NT seq 156 nt   +upstreamnt  +downstreamnt
atggatcctccaccggaacaagtcaactacatctgcggagattgtgggatggagaacact
ctgaagccaggtgatgtgatacagtgccgagagtgcggttaccgcatcttgtacaagaag
cgcactcgccgcattgttcaatatgaggcacgctga

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