Quercus lobata (valley oak): 115971375
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Entry
115971375 CDS
T07350
Name
(RefSeq) ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115971375
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
qlo02000
]
115971375
04147 Exosome [BR:
qlo04147
]
115971375
04090 CD molecules [BR:
qlo04090
]
115971375
Enzymes [BR:
qlo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
115971375
Transporters [BR:
qlo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
115971375
Exosome [BR:
qlo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115971375
CD molecules [BR:
qlo04090
]
Proteins
115971375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_21
RsgA_GTPase
ABC_ATPase
AAA_15
Zeta_toxin
AAA_16
SbcC_Walker_B
AAA_23
AAA_30
DEAD
AAA_24
DUF815
AAA_25
YobI-ATPase
DLIC
Motif
Other DBs
NCBI-GeneID:
115971375
NCBI-ProteinID:
XP_030947116
LinkDB
All DBs
Position
12:34706736..34714637
Genome browser
AA seq
1291 aa
AA seq
DB search
MEARTVGNGNTNMHDDAALKNNVEAEKIPSMINDQEDSDKNGEKKTNTVSFLKLFSFADS
TDVLLMIIGTIGAIGNGLGMPLMTILFGELINVLGSNQHNKDVVREVSKVCVKFLYMAAG
IGFAGFLQVACWMVTGERQAARIRGLYLKTILRQDVAFFDMETNTGEVVGRMSGDTVLIQ
DAMGEKVGKFLQLVSTFIGGFFVAFFKGWLLTLVLLSSIPLLVASGGLMSILISKTASRG
QSAYANAANVVEQTIGSIRTVASFTGEKQAINNYKKYLTTAYKSGVHEGLASGLGFATVM
LVMFSSYGLAIWYGSKLILNKGYSGGDVLNVIMAVLTGSMSLGQASPCISAFGAGKAAAY
KMFETIERRPEIDAYNPKGKFLDDIHGDIELRDIYFCYPARPDEPIFSGFSLYIPSGTTT
ALVGQSGSGKSTVISLIERFYDPLAGEVLIDGINLKDLQLKWIREKIGLVSQEPVLFSCS
IKDNIAYGKDGATYEEIKTASELANAFKFIDKLPQGLDTQVGEHGTQLSGGQKQRVAIAR
AILKDPRILLLDEATSALDAESERVVQEALDRIMINRTTIIVAHRLSTVRNADTIAVIHR
GKMVEKGSHSELVKDPNGAYSQLIHLQEVNNNSEQGADDQNRSEISTESFRQSSLRNSQR
MSFLRSLSRASSAGSGRRSFSVTAFGLPTEITVPDGGLAEIEENYPKVPISRIAYLNKPE
IPILLLGTIAAVINGVILPIFGILLARVINAFYEPPHKLKKDSSFWSLMFVALGVVSFLA
IPARGYLFAVAGCKLIARIRLMCFEKLVHMEIGWFDEPVHSSGSIGARLSGDAATVRALV
GDALGQMVHVIAAAAAGLVIAFLASWQLAFIILALIPLIGVNGYIQIKFMKGFSADAKLK
YEEASQVANDAVGSIRTVASFCAEDKVMELYRSKCEGPRKAGIRQGLITGIGFGTSFGLL
FLVYATSFYAGARLVQAGKATFSDVFQVFFALTMAAMGITQTSNLGPDTGKAKNASGSIF
AIVDRQSKIDPSNESGMTLENVKGEIELCHVSFKYPCRPDIQIFRDLSLTIRSGKTIALV
GESGSGKSTVIALLQRFYDPDSGHITLDGVEIQEFQVKWLRQQMGLVSQEPVLFNETIRA
NIAYGKGGNATEADIIAAAELANAHRFISGLQQGYDTIVGERGVQLSGGQKQRVAIARAM
IKSPKILLLDEATSALDAESEKVVQDALDRVMVNRTTVVVAHRLSTIRNADVIAVVKNGV
IVEKGKHDNLIRIKDGFYASLVALHTSASTT
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaaggacagtggggaatggaaatacaaatatgcatgacgatgctgcattaaaa
aacaatgtagaagcagagaaaatcccttccatgattaatgatcaagaagattcggataag
aatggagagaagaaaaccaacactgtttcgtttctcaagctgttctcatttgcagattcc
actgatgttctcttgatgatcattggcacaataggtgccattgggaatgggctaggtatg
cctcttatgacaatactctttggggaattgattaatgttttgggaagtaatcagcataac
aaagacgtagttcgtgaagtttccaaggtttgtgtaaaatttctctacatggcagcaggg
ataggttttgcaggattcctccaggtggcttgttggatggtcaccggggagcgacaggct
gcacgaataaggggtttgtatttgaagacaattttgagacaagatgttgctttctttgat
atggaaacaaacactggagaggttgttgggagaatgtcaggtgacactgttctcatacaa
gatgccatgggtgagaaggttgggaaatttctgcagctagtatcaacattcattgggggc
tttttcgtagcatttttcaaagggtggcttcttacccttgtcctgttatcctcaattcct
cttcttgtggcatctggtggtcttatgtccatcctcatatccaagacagcatcccgtgga
caaagtgcttatgcaaatgcagcaaatgtagttgaacaaacaattggctcaataagaaca
gttgcatcatttactggggagaagcaagctataaataattacaaaaagtaccttacaacc
gcttacaaatctggtgttcacgaaggtttggcatctggattaggtttcgccactgttatg
ttagtcatgttcagcagctatggtttggctatatggtatggatcaaaattgatactgaac
aaaggatacagtgggggtgatgtgctgaacgtgattatggctgtattgactggatctatg
tccttaggccaggcatctccctgcattagtgcctttggtgctggtaaagctgcagcttat
aagatgtttgagactatcgagaggaggccagagatagatgcttataacccaaagggaaaa
tttttggatgacattcatggagatatagagttgagagatatttatttctgttatccagct
agaccagatgagccaatattcagtggattctctctttatatccctagtggcacaactaca
gctttggttggacaaagtggaagtggaaaatcaacagtgattagtctaattgagagattc
tacgacccactggctggtgaagttctcatagatggcattaatttgaaagacctccaactt
aaatggataagggagaaaattggtcttgttagccaagaacctgtcttgttttcatgcagc
attaaagataatattgcatatggaaaagatggcgcaacgtatgaagagatcaaaactgca
tctgaacttgcaaatgcttttaaatttattgataaattgcctcagggactagatactcag
gttggtgagcacggaacacaactttctggtggtcagaagcagagagttgccattgcaaga
gcaattctgaaagacccaagaatcttacttctcgatgaagctacaagtgcacttgatgca
gagtctgaaagggtagtgcaggaggcattggacaggattatgatcaaccggacaaccatc
attgttgcccaccgtttgagcacggtgaggaatgctgatacaattgcagtcattcacagg
gggaagatggttgagaaaggctcacactcagaactagtcaaggatcctaatggagcttac
tctcagcttatacacttgcaagaagtaaataataattcagaacaaggtgcagatgatcaa
aacagatcagaaatttctactgaatcttttagacagtcaagtcttaggaatagtcaaaga
atgtcattcctacgaagcttaagtcgggcatcttcagcaggaagtggccgccgttctttc
tcagtcacagcatttggtttgccaacagaaattaccgttcctgatggaggactggcagaa
atagaagaaaactaccccaaggttccaatcagccgcattgcttaccttaacaagccagag
attccaatacttcttcttgggactatagctgcagttatcaacggcgtgatacttcctata
tttggtatactgcttgccagggtgatcaacgcattttatgaaccacctcataaactgaaa
aaggattcaagtttttggtcactaatgtttgtggcccttggtgtggtatcatttctggca
attccagcaagaggatacctcttcgccgtggctgggtgtaagttaatagcacgtattaga
ttgatgtgttttgagaagttggttcacatggagattggttggtttgatgagcctgtgcac
tcgagtggctcaattggtgctaggctctcaggggatgcagcaacagtgcgtgcccttgtt
ggagatgcgcttggtcagatggttcatgttatcgctgcagcagctgcaggtttggtcatt
gcatttcttgcaagctggcagttggcatttattatccttgcattgattcctctcatcgga
gtcaatggatacattcaaataaagttcatgaaaggattcagtgcagatgcaaagttgaag
tatgaggaagcaagccaagttgctaatgatgcagttggaagtataagaacagttgcttct
ttctgtgctgaagacaaggtgatggagctatacagaagcaaatgtgaaggcccaaggaag
gcagggataaggcaaggcttgatcactggaattggatttgggacttcttttggcttgttg
tttcttgtctatgctacaagtttctatgcaggagctcgtctcgttcaggctgggaaagca
acattctcagatgtttttcaagttttctttgctttgaccatggcagctatgggaattaca
caaacaagcaacttaggtccagatactggcaaagccaagaatgcttctggttccatattt
gcaatagtagatcggcagtcaaagatagacccaagtaatgagtctgggatgacattggag
aatgtgaaaggagaaattgagctttgtcatgtaagcttcaaatatccttgtaggccagat
attcagatttttcgagatcttagcttgacaattcgttctggcaagacaattgctctggtt
ggagaaagtgggagtgggaaatccacagtaatagcattattgcaaaggttttatgatccc
gattctggtcatattacacttgatggagttgaaattcaggaatttcaagtgaagtggttg
aggcaacagatgggtcttgtgagtcaagaaccagttttatttaatgaaactattcgagcc
aatattgcatatggaaagggaggaaatgcaactgaggcagatatcatagctgcagcggag
ttagcaaatgctcataggttcattagtggcttacaacagggttatgatacaatagtagga
gaacgtggagttcaattgtctggtggacaaaagcaacgggtagccattgcacgtgctatg
attaaaagtccaaagatattactactagatgaagctactagtgcactagatgctgagtct
gagaaggtggtccaagatgcattagatcgtgttatggttaaccgaactacagttgtggtg
gcacatcgattatccacaatcaggaatgcagatgtaatcgcagtggttaaaaatggagtt
attgtagagaaaggaaagcatgacaatttgattagaatcaaggatggcttctatgcctcc
ttggtggcgctgcatacaagtgcttcaactacttga
DBGET
integrated database retrieval system
