Quercus lobata (valley oak): 115978052
Help
Entry
115978052 CDS
T07350
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT3
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo00270
Cysteine and methionine metabolism
qlo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
115978052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
qlo03000
]
115978052
03032 DNA replication proteins [BR:
qlo03032
]
115978052
03036 Chromosome and associated proteins [BR:
qlo03036
]
115978052
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
qlo02048
]
115978052
Enzymes [BR:
qlo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
115978052
Transcription factors [BR:
qlo03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
115978052
DNA replication proteins [BR:
qlo03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
115978052
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
115978052
Prokaryotic defense system [BR:
qlo02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
115978052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
115978052
NCBI-ProteinID:
XP_030955942
LinkDB
All DBs
Position
1:10300135..10307919
Genome browser
AA seq
931 aa
AA seq
DB search
MAKRNSSSKSVTKRTPKVEALPQAAAAPDLNEEEVSSSPSKPRAVGEESAVAKRVLRSRS
VTKKKQEVEAQPQEEEEEEESSSPRKRRAEEEESEMAKLKSRSKSVTEKKRRVEEQPQAA
APKEEEESSSPRRAVEKKDDDEEDSRFVGEPVPDLEARQRWPKRYEEKGKVIKSKDESDE
IILARRHYTQAEVDGQILYNLYDDAHVKAPEGMPSYIGKIVEMFEAVDGGFYFTAQWYYR
AEDTVIQNCHNLIDNKRVFYSEIQNDNPLDCLIEKLTIARIPLDVDPANRTIPNCDYYCD
MLYLLPYSTFVKLPTEERHSSCEASSTISCECDMNGTEQEEDFKVQDHSKTEVSLLDLYS
GCGAMSTGLCLGANLFGLHLVTRWAVDLNRYACESLRLNHPETEVRNESAEDFLLLLEEW
EKLCCYFSLLKSDAVPQVYADLFVADDGDGSDEDNNNDEADDEDGEVFEVEKILGICYGD
PNETKQRELYLKVRWKGYGADEDTWEPIMGLGNCVKTIKEFVTNGYRSKVLPLPGDVDVI
CGGPPCQGISGFNRFRNKENPLDDDKNKQLIVYMNLVQHLKPRYVLMENVVDLVKFANGF
LGRYALGRLIGMNYQVRMGMMAAGAYGLPQFRMRVFLWGAQPTENLPQFPLPTHDVVVRG
VIPLEFEKNTVAHDEGHNLKLEEKLLLKDAISDLPAVENNECRDEMPYSGPPQTEFQKLI
RLGRDELLGLPKQEPLECVLYDHRPLALNNDDYERVCEIPQKKGANFRDLPGVRICSDSN
KNKVEWDPDVERVYLKSGKPLVPDYAMSFVNGTSSKPFARLWWDETVPTVVTRAEPHNQA
ILHPVQNRVLTIRENARLQGFPDCYKLCGPVKERYIQVGNAVAVPVARALGYALGSAFQG
SSGVNEPVFRLPPKFPNISGVCSSAASEDDA
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgcaactcgagctcaaagtcagtaaccaagagaacgccgaaggtggaagcg
ctgccgcaggcggcggcggcgccggatctgaatgaggaggaggtgagcagttcgccgagt
aagcctagggcggtgggggaagagtcggcagtggcaaagcgcgtgttaaggtcgaggtca
gttaccaagaaaaagcaggaagtggaagcgcagccgcaggaggaggaggaggaggaggag
agtagttcgccgaggaagcgtagggcggaagaggaagagtcggaaatggcgaagctcaag
tcaaggtcaaagtcagtgaccgagaaaaagcggagagtggaagagcagcctcaggcggcg
gctcccaaggaggaggaggagagcagttcgccgaggagggcggtggagaaaaaggatgat
gatgaggaagattcgaggttcgtcggagagccagttccggacctagaggctcgccaacgc
tggcctaagcggtacgaggaaaagggaaaggtcataaaaagtaaggatgaatctgatgaa
attattttggctcgacgccattacactcaagcagaggttgatggtcaaattctctataat
ctttatgatgatgctcatgttaaggctccagaaggaatgcctagttatattggcaagatt
gttgaaatgtttgaggcagtggatggaggtttttattttacagctcaatggtattatagg
gctgaggatacggtcatacagaactgtcacaatcttattgacaacaagcgtgtgttctat
tcggaaatccagaatgataacccactggattgtctaattgaaaaattaacaattgctagg
attcctttggatgttgatccagcaaatagaacaattcccaattgtgattattattgtgac
atgctctatttattgccatattctacatttgttaagttaccaacagaagagaggcatagt
agctgtgaggcatcatccactatttcttgtgagtgtgatatgaatgggactgaacaagaa
gaagattttaaagttcaagatcactctaagacagaggtgtcattgctagacctctactcc
ggttgtggtgctatgtcgactgggttatgtcttggagctaatttgtttggtttacatctt
gttaccagatgggctgttgacttaaaccggtatgcttgtgaaagtctcaggttaaaccat
ccagagacggaggttagaaatgaatccgctgaggattttttattgttgctagaggagtgg
gaaaaattgtgttgttatttttccttacttaaaagtgatgctgttccacaagtgtatgcg
gatttgtttgttgccgatgatggtgatggtagtgacgaggacaacaataatgatgaggct
gatgatgaagatggggaggtctttgaagttgaaaagatattgggaatatgttatggtgac
cctaatgagacaaaacaacgggaattatatcttaaggttcgttggaaaggctatggagct
gatgaagacacatgggaaccaatcatgggattggggaattgtgttaagacaataaaagaa
tttgtcaccaatggttatagatcaaaggttttacctttaccgggtgatgttgatgtgata
tgtggtggacctccttgtcaaggcataagtggttttaatcggtttaggaataaagaaaat
ccattggatgatgacaaaaataaacaactaattgtttatatgaacttagtgcaacacttg
aagccaagatatgttttaatggaaaatgtggttgatcttgttaaatttgcaaatggcttt
cttggacgttatgcattgggtcgtcttattggtatgaactatcaagtccggatggggatg
atggcagcaggtgcatatgggcttccacaatttcgcatgcgtgttttcttatggggggca
cagcctactgagaatctgcctcagttcccactccccacccatgatgttgttgtaaggggg
gttattccattagagtttgagaagaatacagttgctcatgatgaaggccacaatctcaaa
ttggaagaaaagcttttgcttaaagatgcaatttctgaccttcctgctgtcgagaataat
gaatgccgagatgaaatgccctacagtgggcctccccagacggagttccagaagcttatt
agactaggccgagatgaattgctgggtcttccaaagcaagaaccattagaatgtgtcctt
tatgatcatcgtccattggcattgaataatgatgattatgagcgtgtttgtgagatccct
cagaaaaagggtgcaaatttccgagatctgcctggtgttcggatctgttcagattcgaat
aaaaataaagtagaatgggatccagatgtagagagagtctatttgaagtcagggaaaccc
ttggtaccagattatgcaatgagttttgtcaatgggacgtcatctaaaccttttgcacgt
ttatggtgggatgagactgtgccaactgttgttacacgagctgagcctcacaatcaggca
attttacatccagtacagaacagggtactcacaatacgtgagaatgccagacttcagggt
tttcctgattgttacaagctttgtggtccagtaaaagagagatacattcaagttgggaat
gccgttgcggttcctgttgctcgagccttgggctatgcattaggttcagcatttcaaggt
tctagtggtgttaatgaacccgtgtttagattgcctccaaaatttccaaacatttcagga
gtgtgttcttcagcagcatctgaggatgatgcttga
DBGET
integrated database retrieval system
