Quercus lobata (valley oak): 115987108
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Entry
115987108 CDS
T07350
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115987108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qlo03021
]
115987108
Enzymes [BR:
qlo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115987108
Transcription machinery [BR:
qlo03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
115987108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
115987108
NCBI-ProteinID:
XP_030966434
LinkDB
All DBs
Position
4:complement(21083029..21114410)
Genome browser
AA seq
1236 aa
AA seq
DB search
MSQQKQEDKEPPFVPQYFGTQQPKRNVKPRPMPAPEDLEPLRELFRHQIESFDYMADAGL
SILFDSIKPVQIHDSFSNRNLKISFENPKLFPPMKDRSSSSSALSSSKSTFREFLYPYEC
RQFKSSYTGALMAEVCFQYDDGPVIRERFNFGQFPIMLKSKYCHLRGADPQKLVSCKEEP
SEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTDKAVVIRCERKNQSSVS
VKLYYLRNGSARLGFWIQGREYLLPVGVVLKALVDTTDHEIYVSLTCCYSERDEMEKGAV
GTQLMGERAKIILDEVRDLSLFTRLQCLEHIGEHFQPVMEGLETKNYSDVADSVLEDYIF
VHLDNNYDKFNLLIFMLQKLFSLIDQTSVPDNSDSLQNQEVLLPGHLITIYLKEKLEDWL
RKAKKSLQDEINKKSNINNKGSNNKNKSFDFCSLADVKKILDKNPVKQISSSVENLLKTG
RLITQTGLDLQQRAGFTVQAERLNFLRFISHFRAVHRGASFAGLRTTTVRKLLPESWGFL
CPVHTPDGEPCGLLNHMTSNCRITSFFDSQGNIRDFKKIRKTILSVLIAVGMTPSLPKLV
QAGPPEVLSVLLDGRVVGSLPSSMVEKVVGHLRRLKVSANSMIANDLEVGYVPLSLGGAY
PGLYLFTSPARFVRPVRNISIPSEESQNIELIGPFEQVFMEIRCPDGGDGGRRNAFPATH
EEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAINFRADQKLYHLQTPQ
SPIVRTSSYTKYGIDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCRGQIYQTET
IDLTEQSSRSDHSQKIFRRSNVNKSMHSTIDSDGLPYVGQTIQQNQPYYCTYDEVTSTTR
PYNRKGSEPVVVDYVALDGKNKEHPRKANIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPD
IDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGYFVDATPFTIPVKKDN
GDSKPKTSSLEETDGKTESKPNSLVEELGEMLKIKGFNYHGVEVLYSGVYGTELTCEIFI
GPVYYQRLRHMVSDKYQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLL
HDRLHTCSDYHIADVCTLCGSILATTSIQQQKQIQKPKKFGGLPPARPPKKVICHACQSS
KGMETVAMPYVFRYLAAELAAMNIKMTLQLSNAAGA
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacaaaagcaagaagacaaggagccgccctttgttccccagtatttcggaaca
cagcagccgaaacggaacgtgaagccgaggccgatgccggctccggaggacctcgagccg
ctacgggagctgttccgccaccaaatcgagtcgttcgattacatggcggacgcgggtctc
tcgatcctcttcgacagcatcaagcccgtccagattcacgactccttctccaaccgcaac
ctcaagatctccttcgagaaccccaagctgttccctccaatgaaggaccggtcgtcctcg
tcctcggctctgtcctcttccaagtccacgtttcgcgagttcctgtacccttacgaatgc
aggcagttcaagagctcgtataccggggcgttgatggcggaggtttgctttcagtacgac
gacggacctgtcattagagagcggttcaatttcggacagtttccaatcatgctcaagtca
aagtattgtcatttgagaggtgcagatccccagaaactagtctcttgcaaagaagaacca
tcagaaatgggcggatacttcatcttgaatggtcttgaaagagtggttcgactcttaata
ttgccaaagcggaattatccaatgagtatggtgcggaattcatttagtgatcgcagagaa
ggatataccgataaagcagttgtcataaggtgtgaaagaaaaaatcagtcttcagtatca
gtcaaattgtattaccttcgtaacggaagtgcaagacttggattttggatacaagggagg
gagtacttgcttcctgtaggcgttgttctaaaggctcttgttgacacgactgatcatgaa
atttatgtgagtttgacgtgctgctatagtgagcgagatgagatggaaaagggtgctgtt
ggcactcagcttatgggtgaaagggcaaaaattattcttgatgaagttcgtgatctgtct
cttttcactcgtcttcaatgtctagagcatattggagagcatttccaacctgttatggag
ggactggaaaccaaaaattattctgatgttgctgattctgttcttgaagactacatattt
gttcaccttgataacaattatgacaagttcaatctgctcatctttatgctgcagaaactt
ttctcacttatagatcagacatctgtaccagacaactcagactccttgcagaatcaggaa
gtcttactccccggtcatctgattaccatttatctcaaggaaaagctagaagattggctg
cgcaaggcaaaaaagtctcttcaagatgagatcaataaaaagagcaacatcaacaacaag
ggcagcaacaacaagaacaaaagttttgatttttgcagcttagctgatgtcaagaagatt
ttggataaaaatcctgtgaagcaaatcagttcttctgttgaaaacttgttaaaaactgga
agactgattacacaaacaggtctagatttgcagcagagggcaggctttacggttcaggca
gaaaggcttaatttcttacgttttatttcgcattttcgtgctgttcatcgaggggcttca
tttgctggacttcgcaccacaactgtgcggaagttgctacctgaatcttggggttttctt
tgccccgtgcacacacctgatggggagccatgtggcttgctgaatcatatgactagcaac
tgtcgaattacatctttctttgattctcaaggaaatatcagagattttaagaaaataaga
aagactattctcagtgttttgattgcggttggaatgacaccttcactgccaaagctagtt
caagctggccctcccgaagttctttctgtccttttagatggtcgtgttgttggttcttta
ccttcctctatggttgagaaagttgtgggtcacttacggagattaaaagtttcagctaat
tcaatgattgcaaatgatctggaggtaggatatgttccattgagtctaggtggagcatac
cctggtttgtacttgttcacatctcctgccagatttgttcggccagttagaaatatttca
attccttccgaggaaagtcagaatattgaacttattgggccatttgagcaggtttttatg
gaaataagatgtcctgatggtggagatggtgggagaagaaatgcttttcctgcaactcat
gaagaaatccacccaactggaatgctcagtgtggttgctaatcttacaccttggtcagat
cataatcaaagcccacgtaatatgtaccagtgtcagatggcaaaacaaacaatggccttc
tcttcacaagcaattaactttcgtgcagatcaaaagctataccatcttcagactcctcaa
agtcccattgttcgcacgagttcatatacaaagtatggcattgacgaatacccatcaggc
acaaatgcaattgttgcagtgctagcatatacagggtatgacatggaggatgccatgatt
ttaaataagtcatctgtggagcgtgggatgtgtcgtggacaaatataccagacggaaact
attgacttaactgagcagagcagcaggtcagatcattcccagaaaatatttcgaagaagt
aatgttaataagtcaatgcattctacgattgattcggatgggctgccatatgttggtcag
acaatacaacaaaatcaaccctattactgcacttatgatgaggtaacaagtaccacaaga
ccctacaaccggaagggttctgagcctgttgttgttgattatgttgcccttgatgggaaa
aacaaggagcatcctcgaaaggcgaatatacgttttcgacatcctagaaaccccgtcatt
ggcgataaatttagcagtagacatggtcagaaaggtgtgtgctcccaattgtggccagat
attgatatgccattttctggagttacaggaatgcgtccagatttgataattaacccacat
gcgtttccatcaaggatgacaattgcaatgcttttggagtctgttgctgctaagggaggt
agcttacatggttattttgtggatgcgacaccatttactattccagtcaagaaagataat
ggagattctaaaccaaaaactagttctcttgaggaaactgacggaaagaccgaatcaaaa
cctaattcacttgttgaggagcttggtgaaatgctaaaaataaaggggttcaattaccat
ggtgtggaggtattatatagtggtgtatatggaacagagctcacatgtgagatctttatt
gggcctgtttattatcagagactccggcacatggtttcagacaaatatcaggtccgatcg
actggaactattgatcaggtcacccgacaacctatcaaaggacgaaagcgtggtggtggt
attcgttttggagaaatggaacgagactccatgcttgcacatggggcggcatatttgttg
cacgataggctccacacgtgttctgattatcacattgctgatgtgtgtacactatgcgga
agcatcctcgcaacgacatctatccagcaacaaaagcagatacaaaagccgaagaagttt
ggggggctacccccggctagaccacccaaaaaggtcatttgccatgcttgccagtcgagt
aaagggatggagacagttgctatgccttatgtgttccgatatttggctgcagagttggca
gctatgaatataaaaatgacccttcagctaagcaatgctgctggagcctga
DBGET
integrated database retrieval system
