Quercus lobata (valley oak): 115995191
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Entry
115995191 CDS
T07350
Name
(RefSeq) LOW QUALITY PROTEIN: protein ADP-ribosyltransferase PARP3
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
qlo
Quercus lobata (valley oak)
Pathway
qlo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
115995191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
qlo03032
]
115995191
03036 Chromosome and associated proteins [BR:
qlo03036
]
115995191
03400 DNA repair and recombination proteins [BR:
qlo03400
]
115995191
Enzymes [BR:
qlo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
115995191
DNA replication proteins [BR:
qlo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
115995191
Chromosome and associated proteins [BR:
qlo03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
115995191
DNA repair and recombination proteins [BR:
qlo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
115995191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_2
PARP
PARP_reg
PADR1_N
PADR1_Zn_ribbon
BRCT
WGR
BRCT_2
Motif
Other DBs
NCBI-GeneID:
115995191
NCBI-ProteinID:
XP_030975515
LinkDB
All DBs
Position
1:12491682..12512459
Genome browser
AA seq
1279 aa
AA seq
DB search
MCIAAIKGWPLHQLDVNNAFIHGDLEEEVYMSLPQGYHSKGGCSTDARPFVCKLRKSLYG
LKQASRQWHAKLSTTITEMGFVQSKSDYALFVHSKGSNFTALLVYVDDILITSNDAQCVA
DLKELLDAKFGIKDLGTLKYFLGLEVARSDKGITLNQRKYALEVLTDSGMIGCKPMKTPM
EQHLRLSKDEGELIDDPSQYRRLIGRLIYLTLTRPNICYAVNRLSQFLSKPRHPHMVAAL
RVLQYIKGAPGQGLFFSANSDFQLKAFCDADWAGCPDTRRSLTGYCIFLDFKIEHSKAAL
LYCDNKAALHIAANTVFHERTKHIEVDCHLVREKIQAGMIKTFHVRTNLQLADVFTKALG
APAFLDLISRLGLLNIFSPNITYSQPWQDSEAISTAEAALVLRGAVKKINQKSKPEAVVN
KGRLTRVRKTKEQKKKRGLNDSNISILLRKLLVALKGVHETRSHARASGEEEKVMTRKQK
AESKEHEAEQSPKKPKSENENGQPNGKDAAEIAAEFEEFCKAIKEHLXYQQMREILEANG
EDSSGPDSAIVSKCQDLLFYGVLEKCSLFCNGNLEYTGTRYSCYSCRGFYSEWSSCTFNT
KDPPRKQEPIKLPDXILNSPVSDLLKKYQDPSRRPHRDLVTTDKPFTXMMISLMGRLSXT
NDYWRKEIEKHGGKVANKVIGATCLVVSPAERERGGTSKLVEAMERGIRVVSEAWLADSV
HKKEAQPFEAFDVVSDLSVDGKGIPWDKQDPSDEALESLSAELKLYGKRGVYKDSILQEQ
GGEIFQKDGILYNCASSLCVLGRGLNDYCVMQPITVPERGLHLYYKKDRVGNDPNAEERL
KQWEDVENAVKEFVRLFEEITRNEFEPWEREKKFQKKPLKFFPIDMDDGIEVRHGGLALR
QLGVAVTHCKLEPLLANFMKVLCSQGIYKYVLMEIGHDPPDLPIGMVTDFHLKRCEEVLL
EFIEKVKSMKETGLKAEAVWSDFSQRWFTLMHSTRSFIFRDFQELADSAAAALETVRDIT
VASHLIEDMSASTIDDPLSDRYKKLGCSIXALDKDSDDYKMILNYLQKTYEPVKVGDIEY
GVSVDNIFAVETNAHSSYDEIKKLPNKVLLWCVVYKFFFTGTRTSNLLRHLHKGYLPSIC
HLPVPGYMFGRAIVCSDAAAEAARYGFTAVDRPEGFLVLAIASLGDQITEPKSPPENTKS
LEDKKLGVKGLGRKKTDESEHFAWKDDIKVPCGRLVPSEHNDXPLEYNEYATYDPKQVSI
RFLVGVKYEEKGAVMETKE
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgtgtattgctgctatcaagggttggcctttacatcagttggatgttaataatgccttc
atccatggtgatttagaggaggaagtgtacatgtccttaccacagggctatcacagcaag
gggggctgttcaacagatgctagaccttttgtatgcaagttgagaaagtcactttatgga
ttgaagcaggccagcaggcagtggcatgctaaactatccacaacaatcactgaaatgggt
tttgttcaatcaaaatctgattatgccctatttgtacattcaaagggctctaattttact
gcccttttggtctatgtagatgacatattgatcacaagtaatgatgctcaatgtgtagca
gatttaaaagaactcttggatgctaagtttgggataaaagacttaggaaccttgaagtat
tttctggggttagaagtggcaaggagtgacaagggcattactcttaatcagagaaaatat
gccttagaagtgttgacagattcaggtatgataggctgcaagcctatgaaaactcctatg
gagcagcaccttagattgtcaaaggatgaaggagagttaattgatgatccttcacagtac
agaaggcttataggtaggttgatttatttaaccttgacaagaccaaacatttgttatgca
gtgaataggctaagtcaatttttgagcaagcctaggcatcctcacatggtggcagcacta
agggttttacaatacatcaagggtgctccagggcaggggttgtttttctcagccaactca
gattttcaattgaaggcattttgtgatgcggactgggcaggatgccctgacactaggaga
tctttgacaggatattgcattttccttgacttcaagattgagcactccaaggctgcacta
ctctactgtgacaacaaggcagccttgcacatagctgcaaacacagtgttccatgagaga
acaaaacatatagaagtagattgtcatttagtcagggaaaaaatacaggcaggtatgatt
aagactttccatgtcaggaccaatttacaactggctgatgtgtttactaaagcacttggt
gcacctgcattcttggatttgattagtagattaggattactcaacattttcagtcccaac
attacttattcacaaccatggcaagactcagaagctatttccacagcagaagcagctctg
gtcttgaggggggctgttaagaagatcaaccaaaagagtaaacctgaagcagtggtgaat
aaaggaagactgactcgtgtaagaaagactaaagagcaaaagaagaaaaggggattaaac
gacagtaacattagtatattactgagaaagctacttgtagcattaaaaggagttcacgag
acaaggtctcatgctcgtgcgtctggtgaggaagaaaaggtgatgacaaggaagcagaag
gcagagagcaaagaacatgaagcagagcaatctccaaagaagcccaagtctgaaaatgaa
aacggccagcctaatggaaaagatgcggccgagatagctgccgagtttgaagaattctgt
aaagccattaaagagcatctcntctatcaacaaatgcgtgaaatactggaagctaatggc
gaagactcctccggccctgatagtgctattgtctctaaatgccaagatttgctgttttat
ggggtgttggagaaatgctcacttttttgcaatggcaatttggagtacacgggtacacgc
tattcttgctattcttgcagaggattttatagtgagtggtcttcttgcaccttcaacacc
aaggatcctccaaggaaacaagaaccaatcaaattaccagatnttattctcaattctcct
gtttcagatttactaaagaagtatcaggatccaagtcgccggcctcacagggatttagtc
accacagataaaccttttacatgaatgatgatctctctgatgggccgtctttcttgaaca
aatgattattggagaaaagagattgaaaaacatggaggaaaagttgccaacaaagtcata
ggtgcgacttgtctggttgtttctccagctgagagagagcgtggtggcacgtctaaactt
gtggaagcaatggagagaggcattcgtgtagtgagtgaagcttggttggcagatagtgtt
cacaaaaaagaagcccaaccctttgaagcttttgatgttgtcagtgatctctcggtagat
gggaaaggaattccatgggataaacaagatcctagtgacgaggcacttgaatcactctca
gcagaactaaagctttatggtaagagaggagtatacaaggattccatattgcaggagcaa
ggcggagagatattccaaaaagatgggatactgtataattgtgcctcttctctttgcgtc
ttagggcgtggactgaatgactattgtgtgatgcaaccgatcacagtgccagagcgtggc
ttgcatctgtactataagaaagatagagtgggtaatgatccaaacgcagaggagaggctc
aaacagtgggaagatgtggaaaatgctgtgaaagagtttgtgaggctctttgaggaaata
actagaaatgaatttgagccctgggaaagagagaagaaattccagaagaagccactgaaa
ttttttccaatagacatggatgatggaattgaagtgagacatggaggtcttgcacttcgg
cagctaggagttgcagtcacacactgcaaacttgagcctttgcttgccaatttcatgaag
gttttgtgcagtcaggggatatacaagtatgttctgatggagatcggacatgacccccca
gacctaccaatagggatggtcactgattttcacttgaaacgatgtgaggaggttctccta
gagttcattgaaaaggtgaaatcaatgaaagagactgggctgaaggctgaggctgtttgg
tcagattttagccaaagatggtttactctgatgcactccactagatctttcatctttcgg
gactttcaagaacttgcagacagtgctgcagctgcactagaaactgttcgagacataact
gtggcttcacaccttatagaagacatgagtgcctcaaccattgatgatccattgtctgat
cgatacaagaaactgggatgctcaattntcgcccttgataaagattctgatgactacaaa
atgatcctgaactatctgcagaaaacttatgaacctgtcaaagttggagatattgaatat
ggtgtgtccgttgataacatatttgctgtggaaacaaatgcgcactcttcttatgatgaa
ataaagaagttaccaaacaaagtccttttatggtgtgttgtatacaaatttttctttact
ggcacccgcacctcaaatttattgaggcacttgcataaaggatacttgccatcaatatgt
catcttcctgtcccgggttacatgtttggcagggcaatagtttgttctgatgctgcagca
gaagctgctagatatgggttcactgcagtagacaggccagaagggttcttggtcctcgca
attgcttctctaggagatcaaattactgagccaaagagtccacctgagaataccaagtcc
ttggaagacaagaagcttggggtgaaggggctgggtcgaaagaagactgatgaatcagaa
cactttgcttggaaagatgatataaaagtaccttgtggtcgcttggttccctcagagcac
aatgatnagccccttgaatacaatgagtatgctacttatgatcctaaacaggtgagcata
aggttcttggtgggagtgaagtatgaagagaagggtgcggtgatggagactaaggagtga
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integrated database retrieval system
