Quillaja saponaria (soapbark tree): O6P43_001504
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Entry
O6P43_001504 CDS
T09778
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
O6P43_001504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_001504
Enzymes [BR:
qsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
O6P43_001504
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
O6P43_001504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
DUF5689
Motif
Other DBs
NCBI-ProteinID:
KAJ7982372
UniProt:
A0AAD7VNJ2
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All DBs
Position
1
Genome browser
AA seq
1173 aa
AA seq
DB search
MALKRKPRPDFESLRELFKPHIESFDYLVEAGLETMFQNVKAVEVYDPFTMKKLRIWLGK
PELYPPQKERLSKTMRDALFPHECRQAKISYTGKFVADVCFQYDDGVIIREKFNFGQFPI
MLQSKLCHLRGVDPQKIVSYKEEAAEMGGYFILNGLERVVRLLILPKRNHPMSMVRNSFS
DRREGYTDKAVVIRCVRQDQSSVTVKLYYLRNGSARLGFWVKGREYLLPVGVVLKALIDT
TDHEIYVNLTCCYNEKYEKEKGAVGTQLLGERAVIILDEVRDLSLFTRLQCLQHIGESFQ
ALMDGLEEDSYPVVADAVLKNYIFVHLDNNHDKFNLLILMLQKLFSLIDQTSVPDNSDSL
QNQEVLLPGHLITLYLKEKLEDWLQKAKKLLQDDITNKSKIFDFCSLAQVKKVMDKNPAR
QISSAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRGASFAGLRTT
TVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGNIKDFFKIRLSILNIL
IGVGMTPSLPKLVLAGPPEVLHVLLDGCVVGSIPSSEVEKIVVYLRRLKVSSASVIPDDL
EVGYVPMSMGGAYPGLYLFTSPSRFVRPVKNISIPSDESQNIEFIGPFEQVFMEIRCPDG
IDGGRRSVFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAICF
RADQKLYHLQTPQSPIVRTSSYTKYAMDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVD
RGMFHGQIYQTETIDLTDQGSRSDRIQKVFRRSNIDKSSHSLIDSDGLPYVGQMIRPDEP
YCSMYNEVTGAINTFKRKGSDPAYVDYVAVDVKNKKHLHKVNIRFRHPRNPVIGDKFSSR
HGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGEFV
DATPFGSSVKKENGEPGLKSDSLVDELGVMLRKKGFNYHGVEVLYSGVYGTELTCEIFIG
PVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLH
DRLHTSSDHHIADVCSICGSILTTTFIQQQKRIVREIGGLPPGRAPKKVTCHSCKTSKGM
ETVAMPYVFRYLAAELAAMNIKMTLKLSDGAGA
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaaacgcaagcccagaccggactttgagtcattgcgtgagctcttcaagccc
cacatagagtcgtttgattacttggtggaagccgggttggagaccatgttccagaatgtt
aaggccgttgaagtttacgaccctttcacgatgaagaagctgagaatttggttgggtaag
cctgaattatacccacctcagaaggaacgactatcaaaaactatgcgagacgctttgttt
cctcacgaatgtaggcaggctaaaatttcatatacagggaagtttgttgcagatgtttgc
tttcagtatgatgatggagttattataagagaaaaatttaattttgggcagtttccaata
atgctccagtcaaagctctgtcacttaagaggtgttgatccccaaaaaattgtttcttac
aaggaagaggcagcagaaatgggagggtacttcattttgaatgggcttgagagagttgtc
cgacttctaattttgccaaagagaaatcatccaatgagtatggtgcggaattcatttagt
gatcgacgggaaggatacactgacaaagcagttgtgataaggtgtgtaagacaagatcaa
tcttcagtaacagtcaaattgtattaccttcgtaatgggagtgcaaggcttggtttctgg
gtaaaaggaagggagtatttgcttcctgtgggtgttgtcctgaaggcccttattgacact
actgaccatgaaatctatgtgaatttaacatgctgctataatgagaagtatgaaaaggaa
aagggtgctgtgggaactcagcttcttggtgaaagggcagtaataattttagatgaagtt
cgagatttgtcactttttactcgtcttcaatgtctacaacatattggggagagcttccaa
gcccttatggatggactggaggaggacagttatcctgttgttgctgatgctgttctaaag
aactacatatttgttcatctggacaacaatcatgataaattcaatcttctcatcttaatg
ttgcagaaacttttctcacttatagatcagacatctgttccagacaattctgattccttg
caaaatcaggaggtcttactccctggccacctgattaccctttatcttaaggaaaaacta
gaagactggctacagaaggcgaaaaagcttcttcaggatgatatcaccaacaaaagcaaa
atctttgatttttgcagtttagctcaagtcaagaaggttatggataagaatcctgcgagg
caaatcagttctgctgttgaaaatatgttgaaaactggaagacttgtaacacaaacaggt
ctagatctgcagcagagggctggatacactgttcaggcagagaggctaaatttcttacgt
ttcgtttcacattttcgtgctgtccatcgaggagcttcatttgctgggcttcgcactaca
actgtgcggaagctgctgcccgagtcttggggttttctatgcccagtgcacactcctgat
ggggagccttgtggattactcaaccatatgacttgcacttgccgaattacttcatacttt
gattcgcaaggaaatattaaagatttttttaaaattagattgtctatcctcaatattttg
attggggtaggcatgacaccttcactaccaaagctagttctggctggtccacctgaagtt
cttcatgtacttttagatggttgtgttgttggttctataccttccagtgaagttgagaaa
attgtggtgtacctgcgtagattaaaagtgtcatctgcttcagtgatcccagacgatttg
gaagttggatatgttcctatgagtatgggtggagcatatcctggtctttatttgttcacg
tcaccttctaggtttgttcggccagtcaagaacatatcaattccttctgatgaaagtcag
aacattgaatttattgggccatttgaacaggtctttatggagattagatgtccggatggt
atagatggtggaagaagaagtgtgtttcctgcaactcatgaggaaatccatccaacagga
atgctcagtgtcgttgcaaatcttacaccatggtcagatcacaatcagagtccacgaaat
atgtaccagtgtcagatggcaaaacaaacaatggcattctcatcacaagcaatttgcttc
cgtgcagatcaaaaattgtaccatcttcagacacctcaaagtccaattgtacgtacaagt
tcatatacaaagtatgccatggatgagtatcccactggcacaaatgcaatagttgccgtt
ttggcatatacagggtacgacatggaggatgccatgattttaaataagtcgtctgttgac
cgtgggatgtttcatggacaaatatatcagacagaaactattgacttgactgatcaggga
agcaggtcagatagaatccaaaaggtgtttagaagaagtaatattgataagtcttcacat
tctttgattgattcagatggtcttccatatgttggtcagatgatacgaccagatgaaccc
tattgtagcatgtataatgaggtaacaggtgccattaacacatttaaaagaaaaggttca
gaccctgcttatgttgactatgttgctgttgatgtcaaaaacaagaagcatcttcataag
gtcaatatacgctttcgacatcctaggaaccctgtcattggtgataaatttagcagtaga
catgggcagaaaggtgtctgctcccagttgtggccagatattgatatgccattttctgga
gttactgggatgcgtccagatctgattattaatccgcatgcatttccttccaggatgaca
attgcaatgcttttggaatctgttgctgcaaagggtggcagtttacatggagaatttgtg
gatgcaaccccatttggcagttcagtaaagaaagaaaatggagaacctggtttgaaatct
gattcacttgtggatgaacttggtgtcatgctaagaaagaaggggtttaattaccatggc
gttgaggttttgtacagtggggtttatggaacagaactcacctgtgaaatttttattggg
cctgtttattatcaacgacttcggcacatggtttcagacaaatttcaggtgcgctccact
ggaacagttgaccaggtcacccgacagccaataaaaggacgaaagcgtggtgggggtatt
cgttttggagaaatggaacgagactcgatgcttgcacatggagcagcatatctgttgcat
gataggctgcatacaagttctgatcatcatattgctgatgtatgctctatttgtgggagc
atacttacgacaacattcatccaacaacaaaagcgaatagtgcgggagattggtgggctc
cccccggggagagctcctaaaaaggtcacttgtcattcttgcaagacaagtaaaggcatg
gagacagttgccatgccctacgtcttcagatatctggcagcagagttagcagcaatgaac
ataaaaatgaccctcaagctaagtgatggagctggagcctga
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