Quillaja saponaria (soapbark tree): O6P43_006542
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Entry
O6P43_006542 CDS
T09778
Name
(GenBank) DNA-directed RNA polymerase subunit
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
O6P43_006542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_006542
Enzymes [BR:
qsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
O6P43_006542
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
O6P43_006542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
DUF2635
Motif
Other DBs
NCBI-ProteinID:
KAJ7976817
UniProt:
A0AAD7Q8Q2
LinkDB
All DBs
Position
3
Genome browser
AA seq
1651 aa
AA seq
DB search
MEVASESVEAVGFSFLTSEEVLKHSFVKITNPILLDSIGRPVPGGLYDPALGPLDEKAPC
KSCGQPSKICPGHCGHIDLVYPTYNPLLFNILHKILQKTCFFCYKFRANRIEVETCTSQL
ELIMKGDIVGAKMLDPDNPNESTCEKNADDFQYHSAEELQQKWTSLQFTEAMDVINKFLR
AKMKKCGNCKRKNPQISKPTFGWFYMNQMRDQQARENVIRGSTLDDANSLNESDGAERDT
TSPASGVTEVSDIKGPNIGEELSLQFLKQKSFSGTLLPSEVKDIIKLLWENEVRLCSLIS
DIQGQGLGDRAGHTMFFLETILVPPIKFRPPTKGGDSVMEHPQTVSLTKVLQSNISLGNA
HVNNLDRTKIVGRWRDLQQSINMLFDNKTASGQRVVAPGTIQLLEKKEGMFRQKMMGKRV
NFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPSNVVQLRDAVRNGPDLHPGATHY
ADKVSIVRLPPNQKKRNAISKTLSSSKGVVMRHGKICDYETEGKIVYRHLKDGDVVLVNR
QPTLHKPSIMAHIVRVLKGEKTVRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYHIV
NANNQYVKPTSGEPIRALIQDHIVSAALLTKKDTFLSHDEFNQLLYSSGVSSTGLGSFCG
KPGQQVFISNSEDEIFSLPPAIWKPEPLWTGKQVISALLYYITRGCPPFSVEKSAKIPRD
FFKNKDGEQNHSSQGILTKSEEADEDNVLIYKNDLVRGVVDKAQFGDYGMVHTVQELYGS
DIAGNLLSALSRLFTAFLQMHGFTCGIDDLLLMERKDSERKKQLEKCEEIGENVHREFVE
VMEHEEIDPITLQMNIEKRIRNSGEAALTYLDRKMISGLNSRTSSGFFKELLVEGILKPT
GKNCISLMTTSGAKGSSVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFPPWDSSPRAGG
FIIDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKICYDHTVRD
ADGSIIQFQYGEDGVDVHQTSFITKFEALATNQEMIYNGCRRQLDKSSPYVQKLPFALEE
KAEKFMHDFSSKQRIPLIKKRDFLKLIEHKYLSSLAQPGEPVGVLAAQSVGEPSTQMTLN
TFHLAGRGEMNVTLGIPRLQEILMTASNDIKTPVMTCPLQEGRSMDDATRLADKLKKITV
ADIIESMKVSVVPVAVDNHKIVRIYKLEMKLYKPKHYPKYTNISDADWKRTLEFKFVRKL
EDAIQKHVELLSNICGIKNFIPNKQSKFSSVEDDVSTDRSEPEVRDANDDEGNEDTEEGE
DLGLDAQKRKQQDSDEVDYDEDSEVELTTSELNDGELPDAFEREVDRAESETNSSEDDVN
EVLDPDDVESPSAFTKASESIDGENKRKSIEEKKPEAELEKKENDRRILVKSQGMDFVIH
FQFTNEPHFLLAQLAQRTAKTVCIQSFGKVDECRAVTCKENQIIYYGKDPRSRDDIPSSV
KEKVPALQTTGVDFVTFWQLQNVLDVRYIYSNNIHAVLNTYGVEAARETIIREIMNVFKS
YGISVNIRHLTLIADFMTHSGGYRPMNRMGGIAESISPFCKMSFETAAKFIVEAAFHAEV
DNLETPSARICLGLPVKMGTGCFDLMQKVEI
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgcttctgagtctgtcgaggcagttgggttcagtttcttaactagtgaagag
gttcttaagcatagttttgtgaaaattacaaaccccattttgttagacagtattgggagg
cctgtacccggtggattgtatgatccagctttgggtccactggatgaaaaagctccttgt
aaatcatgtggtcagccttcaaaaatatgtccaggtcattgtggtcatattgaccttgtt
tatcctacttataaccccctgctgttcaatattcttcataaaatcctacaaaagacttgc
ttcttttgctataagtttcgggcgaatagaattgaggtggagacatgtacatcacaattg
gaactcatcatgaaaggtgatattgttggggccaaaatgttagatcctgacaacccgaat
gaatccacatgtgaaaagaacgctgatgattttcagtatcatagtgctgaggagctgcag
caaaaatggacatctcttcagttcactgaggcaatggatgtaataaataaatttctgagg
gccaaaatgaagaagtgtgggaactgtaagaggaaaaatcctcaaatcagtaaaccaacc
tttgggtggttttatatgaatcaaatgcgagatcagcaagctagagaaaatgttatcaga
gggtcaacccttgatgatgccaacagtttaaatgagtctgatggagctgaaagagataca
acgagtcctgcctccggtgtaactgaagttagtgatataaaaggacctaatataggagag
gagctgtctcttcagttcttgaagcagaagagcttttccggcactttgttaccatcagag
gttaaagatattataaagcttttatgggaaaatgaggttcgactctgttcacttattagt
gatatccaaggtcagggacttggagatagagcagggcacactatgttctttctagagact
attcttgttccacctatcaaatttcgcccccccaccaagggaggtgattctgtgatggag
catcctcaaactgtttccttgactaaagtcctgcagtccaacatttccttaggaaatgct
catgttaacaacttggatcgcacgaagatagttggtcggtggagggatcttcagcaatct
ataaatatgttatttgacaacaaaactgcctctggtcaaagagttgtggctccaggaact
attcagttgctggagaagaaggaaggcatgttccggcagaaaatgatgggaaagagggtt
aactttgcttgccgctctgtcatatcgcctgatccctatttggcagtgaatgaaattgga
attccaccatattttgcattaagattaacgtatccagagagagtgactccttcgaatgta
gtccagttgagggatgctgtgagaaatggtcctgatttgcatccgggtgccacacactat
gctgataaagtgtccattgtcagactgcctccaaaccagaaaaaacgcaacgcgatatca
aaaacattatcatcctcaaaaggagttgtcatgcgacatgggaaaatatgtgattatgag
acagaaggcaaaattgtatatcgccacttgaaagatggtgatgttgtgcttgtcaaccga
cagcctacacttcacaaacccagcataatggcacatatagtccgtgtactaaaaggggag
aaaacagtacgaatgcactatgcaaactgcagtacttacaatgctgattttgatggtgat
gaaatgaatgttcatttcccccaagatgaaatttctcgggctgaagcctaccacattgtg
aatgctaataatcaatatgtcaagcctaccagtggtgaacctattagagctttgattcag
gatcatattgtgagtgctgcacttcttacgaagaaggacacctttttaagccatgatgaa
ttcaatcagctcctgtatagttctggtgtgtccagcactgggttaggttctttctgcggt
aaacctgggcagcaagttttcatttcaaactccgaagatgaaattttctctcttccacca
gcaatatggaagcccgagcccctatggacgggaaaacaggtcattagtgctttgctgtat
tatatcactagaggttgcccaccgttctctgttgaaaaaagtgcaaaaatcccgcgtgat
tttttcaagaataaagatggtgaacagaatcattcttcccaaggtatattgacaaagagt
gaagaagctgatgaagataatgtgctgatatataaaaatgatttggttcgcggagtggtt
gacaaggctcagtttggtgactacgggatggtccatacagtgcaagaattatatggctca
gatattgctggtaatctgctttcggcgctgagtcgtttattcactgcctttttgcagatg
catgggttcacatgtggaatagatgatcttctgctaatggaaagaaaagacagtgaaaga
aagaagcaacttgaaaagtgtgaggaaattggtgaaaatgttcatcgcgaatttgtcgaa
gtcatggagcatgaagaaatagatccaataacactgcaaatgaacatagagaaaagaatc
cgcaatagtggagaagctgccttgacatacttggataggaagatgataagtggacttaat
tccagaacaagctcaggatttttcaaggaattgttagttgaggggatactgaaacccact
ggaaagaattgtatttctcttatgactacttctggggctaaaggtagttcggtcaacttc
caacagatatcttcttatttaggtcaacaagagttagaaggcaagagagtccccagaatg
gtttctggaaagaccttgccatgctttcctccttgggattcttcccctagagctggaggc
tttattattgatcggtttcttacaggccttcacccacaagaatattacttccactgcatg
gctggtcgcgaaggattagttgatacagcagtcaaaacctctcgcagtggatacctgcaa
agatgtctgataaaaaaccttgagtgcctgaaaatttgttatgatcatactgttcgtgat
gctgatggttcaattattcaatttcaatatggagaagatggtgtggatgtccatcaaaca
agctttattactaagtttgaagcactcgcaacaaatcaagaaatgatttataacggatgt
cgccgtcagctggacaaatccagtccttatgttcagaagcttccttttgctcttgaagaa
aaggcagaaaagtttatgcatgatttctcgtcaaagcagagaattcctttaattaaaaaa
agggatttcttgaagttgatagagcacaaatatctctctagtcttgcacagccaggagag
cctgttggtgttctggctgcccagtccgtaggagaaccttccactcagatgacgttgaat
accttccatcttgccgggcgaggtgaaatgaatgtgacacttgggattccacgtctacaa
gagatcttgatgacagcctcaaatgatattaagactccagtgatgacatgccccttgcaa
gagggaagatctatggatgatgcaacccgtcttgctgataagttgaagaagatcaccgta
gcagacataatagagagcatgaaagtgtctgttgtgcctgtagctgttgacaatcataaa
attgtccgcatatataagctcgagatgaagctttacaaacctaaacactacccaaaatac
accaacatatcagatgcagactggaagagaaccctggagttcaagtttgtgaggaaattg
gaggatgccatacaaaaacatgtagaattgctgtccaatatatgcggcataaaaaatttc
ataccaaataaacaatcaaagttttcaagtgtagaagatgatgtttccaccgacagatct
gaaccagaggtaagggatgccaatgatgatgaaggtaatgaagatactgaggagggtgag
gatcttggtctggatgcacagaagagaaaacaacaagatagtgatgaggttgattatgat
gaagattctgaagtagaactaactacttcagaactaaatgacggggagttaccggatgca
tttgaaagagaagttgatcgggctgagagtgaaactaacagtagtgaggatgatgtgaat
gaggtacttgatcctgatgatgttgaaagcccatcagcatttacgaaagcctctgagtct
atagatggagagaacaagcgaaaatcaattgaagagaagaaacctgaagctgagctagaa
aaaaaggaaaacgataggagaatcttagtgaaatcccagggaatggattttgtgatacat
ttccaattcaccaatgaacctcattttttactggctcagctcgctcaaagaacagcaaag
acggtttgcattcagagctttgggaaggttgacgagtgtcgagctgttacatgcaaagaa
aatcagataatttactatggtaaggatcccaggagcagggatgatattccatcctctgta
aaagagaaagtacctgcacttcagacaactggagtggattttgttactttttggcagttg
caaaatgttctcgatgtgaggtacatatattcaaacaacatacatgctgtactaaatact
tatggagtggaagctgccagagagaccatcatcagggaaataatgaatgttttcaagtct
tatgggatatctgtaaatatccggcacctaacccttattgctgattttatgactcattcg
ggtgggtatcgtcctatgaacagaatggggggcatagcagagtcaatatctcctttctgt
aaaatgtcttttgagacagcggccaagttcatagttgaagcagcttttcatgcagaggta
gacaacttagagactccatctgccagaatctgtcttgggttgccagtgaagatgggtact
ggatgctttgatttgatgcagaaggtcgaaatctga
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