Quillaja saponaria (soapbark tree): O6P43_029737
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Entry
O6P43_029737 CDS
T09778
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
qsa
Quillaja saponaria (soapbark tree)
Pathway
qsa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
qsa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
O6P43_029737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsa03021
]
O6P43_029737
Enzymes [BR:
qsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
O6P43_029737
Transcription machinery [BR:
qsa03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
O6P43_029737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
KAJ7949400
UniProt:
A0AAD7L0N9
LinkDB
All DBs
Position
12
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AA seq
1167 aa
AA seq
DB search
MGLNQESSEEQKKQNQNSSLGKQLPNHQVGDLGIDKQFLTAPIKSAVDKFQLLPEFLKVR
GLVKQHLDSFNYFVRTEIKKIVRANNRIVASKHPNIYLRFKDVRIDKPSMMVDGTDAEVS
PHYCRVSDLTYAAPIKVSIEYIQVSHGETSKKEKNDVVIGRIPIMLRSCRCILYGKDEAE
LAKLGECPLDPGGYFIIKGTEKVILIQEQLSKNRIIIDTDKNGNINASVTSSTEATKSKT
VILMKKEKIWLQLNQFPKEVPIMVVMKAMGMESDQEVVQMLGRDPRYGSLLLPSIEECAK
NSIYTQQQALDYLETKVKKSSYTSDSSEKGDRALSVLREVFLANVPVRQNNFRPKCIYVA
VMIRRMMDAILNKDAMDDKDYVGNKRLELSGQLLALLFEDLFKTMIDDAKRGIDKNLEKP
SRGSRFDFPYYISRDTITVGLERALSTGNWDVKRFKMHRTGMTQVLQRLSFIATMGHVTR
VDPHFKKSMKVSGPRALQPSQWGMLCPCDTPEGAHCGLVKNLALMTHVTTDEEEGPLISL
CYSLGVEDLELLSGEELHTPDSFLVIFNGVILGKHRRPQRFATAMRKLRRAGKIGEFVSV
FVNEKQHCVYIASDGGRVCRPLVIADKGISRVKEHHMKELVDGVRKFDDFLRDGLIEYLD
VNEENNSLIALYDGNATPETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAM
GNIAYNQLKRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDA
IVMNKSSLDRGFGRCIVLKKFTAIKQKYENNTSDRILRPDRTGENAGRMQILDDDGLASP
GEIIRANDIYINKQSPINTRRSIGSSAASLPDNAYRPSIQTFKGEGDNWVVDRVVLSSDK
NTNLCFKFVMRHTRRPEIGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFP
SRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADKVECISETLVKHGFSYNGKDFIY
SGITGCPLQAYIFMGPIYYQRLKHMVLDKMHARGNGPRVMLTRQPTEGRSRNGGLRVGEM
ERDCLIAYGASMLIFERLMLSSDQFQVQVCRECGLLGYYNHKLKTGICSLCKNGDSISTL
SLPYACKLLIQELQSMNIVPRLKLAEA
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgaaccaggaatcctcggaagaacaaaaaaagcaaaaccaaaattccagtttg
ggcaagcaattacccaatcaccaagttggagatttgggcattgacaaacaattcctcacc
gctcctataaaatctgctgttgacaaatttcagcttcttcctgaattcctcaaggtgaga
ggattagtgaagcaacatttggattcgtttaattatttcgtgagaacagagataaaaaag
attgttcgggctaacaatcgtattgtagcgtctaagcacccaaacatttatctgaggttt
aaggatgtcaggattgataaaccttcaatgatggtagatggtactgatgctgaagtttct
ccccactactgtcgtgtatctgacttaacgtatgcagcgccaataaaggtcagcatagag
tacattcaagtcagtcatggtgaaacaagcaaaaaggagaagaatgatgttgttattgga
agaattcctatcatgttacgaagttgccgttgcatcttgtatggaaaagatgaagctgaa
cttgcaaagctaggtgagtgcccccttgatccgggaggatattttataatcaaagggaca
gagaaggtgattttgatacaagaacaactttcaaagaacagaattattattgatactgac
aagaatgggaacattaatgcatctgttacgagcagtacggaggcaacaaaaagcaagaca
gtcattttgatgaaaaaagagaagatttggttacaactgaatcaatttcctaaggaggtt
cctattatggttgtaatgaaagcaatggggatggagagtgatcaagaagttgtgcagatg
cttggaagagatcctcgatatggttccctactcttgccatctattgaggaatgtgcaaaa
aatagcatatatacacaacaacaagcattggattatctcgagacaaaggtcaagaagtcc
tcatacacaagtgattcctctgaaaagggagatagagcattatctgtcctacgagaagta
tttcttgctaatgttccggtacgtcagaataattttcgacccaaatgtatttatgtagct
gtgatgatcagacgtatgatggatgcaattctaaataaggatgcaatggatgacaaggat
tatgtgggaaacaagcggttagagttatctggacagttattagctctgttatttgaggat
cttttcaagacgatgatagatgatgctaagaggggaatagacaaaaatcttgaaaagccc
agcaggggtagccgctttgactttccgtattatatttctagagataccataacagttgga
ttggaacgagctctctctactggtaattgggatgtcaaacgattcaagatgcacaggaca
ggcatgacacaggtgctacagaggttatcatttatagcaactatggggcatgtgacaaga
gttgatccacattttaagaagtcaatgaaagtaagtggaccaagagcattgcaacctagc
cagtggggaatgctttgtccctgtgatactccagaaggagcacattgtggactggtaaaa
aacttggctctgatgactcatgttacaaccgatgaagaggagggcccgttaatttctctg
tgctattctctgggagttgaagacttggagctactctctggagaagagcttcacacacca
gattcctttcttgtcatttttaatggggtgatccttggcaagcatcggagaccacagcgt
tttgctactgctatgagaaagctacgcagagctggaaaaattggcgagtttgtaagtgtg
ttcgtcaatgaaaagcagcattgtgtttacattgcttctgatggaggtagagtttgtcgt
ccccttgttattgctgacaagggcatatcaagagtcaaagaacatcacatgaaggaattg
gtggatggtgtgcggaaatttgatgattttttacgtgatggattgatcgagtatcttgat
gtcaatgaggaaaacaattctttgattgctttatatgatggaaatgctactccagaaact
acccatattgagattgagcctttcaccatcttaggggttattgctgggttaattccatac
cctcatcataatcagtcgcctagaaacacttatcagtgtgcaatggggaagcaagcaatg
ggaaatatagcatataaccagttaaagcggatggacactttgctttacctgctggtttat
cctcaacggccattgttgacaacaaggacaattgagctggttggatacgataagcttggg
gcaggccagaatgccactgttgctgtaatgagttatagtggttatgatatagaggatgca
attgtcatgaataagtcatctcttgaccgtggttttggtcgctgtattgttttgaagaag
tttactgccatcaaacaaaaatatgaaaataacacatcagacaggatactcaggccagat
agaacaggagagaatgcaggacggatgcagatactggatgacgatggacttgcttcacct
ggggaaattattagagcaaatgacatctatatcaataaacaatctccaattaatacaagg
cgatcaattggaagttctgcagctagtttaccggataacgcatatcggcctagcatacag
acatttaagggtgaaggagacaattgggtagtggatcgagttgttctttcttctgataag
aataccaacttatgtttcaaattcgtaatgcgccatactcgtaggcctgagattggtgac
aaatttagtagcagacatgggcagaagggtgtttgtggaaccataatccagcaggaagat
tttccattttctgaacgtggcatttgccctgatctaatcatgaatcctcatggatttccg
agtcgaatgacagtgggaaaaatgatagagcttttagggggaaaagctggagtatcgtgt
gggaggtttcactatggcagtgccttcggggaaccaagtggacatgctgataaggttgaa
tgtataagtgaaacccttgtgaaacatggctttagctacaatggaaaggacttcatctac
tcaggtattactggttgcccactgcaagcatatatttttatggggccgatttactaccag
aggctaaaacacatggtactggataaaatgcatgctcgaggtaatgggcctcgcgtcatg
ctaaccagacaacctactgaagggagatctcgaaatggaggacttcgagttggagaaatg
gaacgtgattgtttaattgcctatggtgctagtatgttgatttttgagcggctaatgtta
tctagtgatcagtttcaagttcaggtttgcagagagtgtggcttgttaggatattacaat
cataagctgaaaactggaatatgttcattatgtaaaaatggagatagtatctccacattg
agtctgccttatgcctgcaagctcttaatccaggaactccaatcaatgaatattgttcct
cgcttaaaactagcagaggcataa
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