Qipengyuania spongiae: L1F33_05140
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Entry
L1F33_05140 CDS
T08950
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
qsp
Qipengyuania spongiae
Brite
KEGG Orthology (KO) [BR:
qsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
qsp03009
]
L1F33_05140 (rimO)
Enzymes [BR:
qsp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
L1F33_05140 (rimO)
Ribosome biogenesis [BR:
qsp03009
]
Prokaryotic type
ribosomal protein modification factors
L1F33_05140 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UVI40329
LinkDB
All DBs
Position
complement(1030240..1031619)
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AA seq
459 aa
AA seq
DB search
MTTTATSIPDQKKVGMVSLGCPKALVDSERILTRLRADGYAMSPDYAGADVVLVNTCGFL
DSAKEESLQAIGEAIAENGRVIVTGCMGEEADAIRAAHPSVLAVTGAHQYEAVVEAVHTH
APPSQGPYIDLIPQPDIKLTPRHYSYLKISEGCNHSCAFCIIPQLRGKLASRRIDAVLRE
AEKLVAAGTRELLVISQDTSAYGVDTRHEAREWHGREVRAHMTDLARELGSLRTADGTPP
WVRLHYVYPYPHVDQVIPLMAEGLLTPYLDIPFQHAAPLVLKRMKRPANEAKVLERLRKW
REICPDIAIRSSFVVGFPGETEEDFRYLLDWLEEAQLDRVGGFRFEEVEGAAANALPDPV
PEAVKEERYARLMEVTERISTAKLAAKIGRTIPVIVDEVGEPDEDGDIGATGRSQADAPE
IDGQVFLRDVGPDLVPGDIVEVAIEDADAHDLFGVPTTR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccgccacctcgattcccgaccagaagaaggtcggaatggtctcgctcggc
tgtcccaaggcgctcgtcgattccgagcgtatcctcacgcgcctgcgggccgatggctac
gctatgagccccgactatgccggggcggacgtggtgctggtcaacacctgcggcttcctc
gacagcgccaaggaagagagccttcaggccatcggcgaggcgatcgcggagaatggccgc
gtgatcgtgaccggttgcatgggtgaggaagccgacgccatccgcgcagcgcatcccagc
gttctcgcagtgaccggcgcccaccaatacgaggcggtggtcgaggcggtgcacacccac
gccccgccctcgcaggggccgtatatcgacctcattccccagcccgacatcaagttgacg
ccgcgccactacagctatctcaagatttccgagggctgcaatcattcctgcgccttctgt
atcatccctcagctgcgcggaaagctcgccagccgccggatcgacgcggtgctccgcgag
gcggagaagctcgtggcggcgggcactagggagctactggtcatcagccaggacaccagc
gcctatggcgtcgatacgcggcacgaggcgcgggaatggcacggccgcgaggtccgcgcc
cacatgaccgacctcgcccgcgaactcgggtccctgcgcaccgcggacggcacgccgccc
tgggtccggctgcactacgtctacccctacccccatgtcgatcaggtcatcccgctgatg
gccgaggggctgctgacaccctatctcgacatcccgttccagcatgccgcgccattggtg
ctgaaacgcatgaagcgcccggcgaacgaggcgaaagtgctcgagcgactgcgcaaatgg
cgcgagatctgccccgacatcgccatccggtcgagcttcgtggtcggctttcccggcgag
acggaggaggatttccgctacctgctcgactggctcgaggaagcgcagctcgaccgggtc
ggcggcttccgcttcgaggaggtcgaaggtgcggccgccaacgccctgcccgaccccgtg
cccgaagcggtcaaggaagaacgctacgcccggctgatggaagtgaccgagcgcatttcc
accgccaagctcgctgccaagatcggccggaccatccccgtcatcgtcgacgaggtcggc
gagcccgatgaggacggcgatatcggcgccaccggccgcagccaggccgacgcaccggag
atcgacggccaggtcttcctgcgtgatgtcggccccgatctcgtccccggggatatcgtc
gaggtcgcaatcgaggatgccgacgcgcacgatctgttcggcgtgccgacaacgcgctga
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