Quercus suber (cork oak): 112002217
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Entry
112002217 CDS
T05868
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic isoform X1
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu00906
Carotenoid biosynthesis
qsu01100
Metabolic pathways
qsu01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
112002217
Enzymes [BR:
qsu01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
112002217
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Paralog
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
GIDA
FAD_binding_2
HI0933_like
FAD_oxidored
Thi4
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
112002217
NCBI-ProteinID:
XP_023890139
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All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MECVGLGARNFAAMGVSFWPTFPSQRITLSRKQGPFRRCGLCRHYVRVRAASTGSERCVA
VNFKEGFADQEDYVKGGGSELLFVQMQQNKLMDKQSKLADKLAPISVGENVLDLVVIGCG
PAGLALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFKDLGLEGCIEHVWQDTILYLDDN
DPILIGRAYGRVSRHLLHEELLRRCVESGVSYLCSRVERIAEASNGHSLVACEHDIVVPC
RLATVASGAASGKLLQYEVGGPKVSVQTAYGVEVEVENNPYDPSLMVFMDYRDYMKQKVP
CLEAEYPTFLYAMPMSPTRVFFEETCLASKEAMPFGLLKKKLFSRLQTMGIRIIKTYEEE
WSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIANILKQAHSKD
TLTRIKSTENISMQAWNSLWPQERKRQRAFFLFGLALILQLDIEGIRTFFHTFFRLPNWM
WQGFLGSTLSSADLALFALYMFVIAPNDLRMSLIRHLLSDPTGATMIRTYLTV
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgttggacttggagctcggaactttgcggcaatgggggtgtcgttttggcct
acttttccgtcgcagagaatcacgctaagtagaaaacaaggcccatttcgtcggtgtggt
ttgtgccggcattatgtgagagtaagagcggccagtacagggagtgagagatgtgtggct
gtgaatttcaaagaaggttttgctgatcaggaagattatgtaaaaggtggtgggtccgag
ctcctctttgtacaaatgcagcaaaacaagctcatggataagcaatctaaactcgctgat
aagttagcacctatatctgttggggagaatgtgctggatttggtcgtgattggttgcggt
ccagctgggcttgctctggctgcagagtcagccaagttaggactcaaagttggactcatt
ggtccagacctcccttttacgaataattatggcgtgtgggaggatgaatttaaagatctt
ggacttgaagggtgtattgagcacgtttggcaggatacaattttatatcttgatgacaat
gatcccattctgattggtcgtgcctatggacgtgtaagtcgacatttgctccatgaggag
ttgttacgaaggtgtgtcgagtcaggtgtttcatatctttgctctagagtggaaaggatt
gctgaagctagtaatggccacagtcttgtagcctgtgaacacgatattgttgttccctgc
aggcttgctactgttgcgtcaggagcagcatcagggaaattgttgcagtatgaggtgggt
ggtccaaaggtgtctgttcaaacagcttacggtgtggaggttgaggtggaaaataatcca
tatgatcccagcctcatggttttcatggactatagggactacatgaaacaaaaagttcca
tgtttagaagcagaatatccaacatttctttatgccatgcccatgtccccaacaagagtg
ttctttgaggaaacttgtctggcttcaaaagaagctatgcctttcggtttgttgaagaaa
aaactcttttcaaggctacagacaatggggatccgaattataaaaacttatgaagaggaa
tggtcttatatcccagttggtggatccttaccaaatacagagcaaaagaaccttgcattt
ggtgctgctgccagcatggtgcatccagccacaggttattctgttgtgagatctttgtca
gaagctccaaaatatgcctctgtgattgcaaatattttgaagcaggctcattctaaggat
actcttactcgtataaaatctactgagaatatctcgatgcaagcttggaactccctttgg
ccacaagaaagaaaacgccaaagggcattctttctctttggattagcgctgattctgcaa
ctggatattgagggcattaggacattctttcatactttcttccgcttacccaattggatg
tggcagggatttcttggctccactctctcctcggcagacctggcattgtttgccttatat
atgtttgttatagcaccaaatgatctgagaatgtcccttatcagacatcttctttctgat
cccactggagcaaccatgataagaacctatcttacagtatag
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