KEGG   Quercus suber (cork oak): 112004341
Entry
112004341         CDS       T05868                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03020  RNA polymerase
qsu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112004341
  09124 Replication and repair
   03420 Nucleotide excision repair
    112004341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qsu03021]
    112004341
   03400 DNA repair and recombination proteins [BR:qsu03400]
    112004341
Transcription machinery [BR:qsu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     112004341
  RNA polymerase III system
   RNA polymerase III
     112004341
  RNA polymerase I system
   RNA polymerase I
     112004341
DNA repair and recombination proteins [BR:qsu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      112004341
SSDB
Motif
Pfam: RNA_pol_Rpb6 Aim21
Other DBs
NCBI-GeneID: 112004341
NCBI-ProteinID: XP_023892335
LinkDB
Position
Unknown
AA seq 142 aa
MADEDYNDLDMGYEDEPLEPEIEEGAEEDLENNANEDAPEEIEGEEREEQEPVEHPRKTS
KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS
YEDWGVDELIVEDSWKRQVGGD
NT seq 429 nt   +upstreamnt  +downstreamnt
atggccgatgaagattacaatgatttggacatgggatatgaggatgagcccctggagcct
gagatcgaggaaggtgcggaggaggatttagagaacaatgccaatgaagatgctccggaa
gagattgaaggtgaggagagagaagagcaggaaccagttgaacatcctcgtaagacctca
aagtacatgacaaaatatgagcgtgccagaatattgggtacccgtgctctgcagatcagt
atgaacgcacctgtgatggtcgagttggagggtgaaactgacccacttgagattgcaatg
aaggagcttcgcgagcggaaaatacctttcaccatccgccgctacctgccagatggaagt
tatgaagactggggagttgatgaactgattgtggaagactcatggaagaggcaagtgggt
ggcgattga

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