Quercus suber (cork oak): 112005992
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Entry
112005992 CDS
T05868
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112005992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsu03021
]
112005992
Enzymes [BR:
qsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112005992
Transcription machinery [BR:
qsu03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
112005992
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
112005992
NCBI-ProteinID:
XP_023894061
LinkDB
All DBs
Position
Unknown
AA seq
1158 aa
AA seq
DB search
MGEKKDSLEDPTKQNQHVGKQLPDNPDIDMQFLSAPIKSAVDKYQLVPEFLKVRGLVKQH
LDSFNYFVNIGIKKIVRANDRIESSLEPSVYVRFKNVRIGKPSVPRDGVDDEICPQFCRL
SDMTYAAPILVNVEYNTQGNNPQKTRFEKNDVTIGRMPIMLRSCCCVLYGKDEAELARLG
ECPLDPGGYFVIKGTEKVMLIQEQLSKNRIIIDSDKKGNINASVTSSTEDRKSKTVILME
KGKMYLHLNMFSEKIPIMVVMKAMGMESDQEVVQMVGRDPRYSAVLLPSIEECANKGIFT
KQQALEYLDPKAKRTYASASEKGALPVLRDMFLANVPVRQGSFRAKCIYVAVMLRRVIDA
FLNKDTMDDKDYVGNKRLELSGQLISLLFEDLFKTMIDNVKKKMDEIMGKPSRSSRFDPA
PYLCGDSITNGLERTLSTGNFNVKRFRMDRKGMTQVLARLSFIAAMGHMTRISPQFEKSR
KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCYYLGVEDL
ELLSGEELHTPNSFLVIFNGLILGKHRRPQHFAATMRKLRRAGKIGEFVSVYVNEKQCCV
YVASDGGRVCRPLVIADKGISRIKEHHMKELLAGVRTFDSFLQDGLIEYLDVNEENNALI
ALYEGEATTETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLR
RMDTLLYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD
RGFGRCIVMKRYSAVLQKYENDTQDRILRPDRKGYGAKHMRILDDDGIASPGEIISPQDI
YINKQSPAVTRGTRVPPSELPNIGYKSSKQTFKGPEGESCVVDRVALYNDRHNNLSIKFL
IRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI
ELLGGKAGVSCGRFHYGSAFGEPSGHADTVEAMSEILVNKGFSYNGKDFLYSGITGCPLQ
AYIFMGPIYYQKLKHMVLDKMHARADGPRVLLTRQPTEGRARNGGLRVGEMERDCLIAYG
ASMLIFERLMISSDPFEVQVCRICGLLGYYNHHLKTGICSSCKKRDGMSTMKLPYACKLL
IQELQSMNIVPRLKLAEA
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaaaaaaggattctttggaagaccccacaaagcaaaatcaacatgttgggaag
caattgcctgacaatccggacatcgacatgcaattcctctccgcccctatcaaatccgcg
gtcgacaaataccagcttgttcccgagttcctaaaggtgagggggctagtgaagcaacac
ttggattcgtttaactactttgtgaatattggaataaagaagattgtccgagccaatgac
cgtattgaatcaagccttgaacccagtgtttatgtcaggtttaaaaatgtcagaattggt
aaaccatcagtaccaagagatggtgtcgatgatgaaatctgtccccaattttgccgctta
tctgacatgacgtatgctgctccaatattggtcaatgttgagtacaacactcaaggaaat
aatccccaaaaaaccagatttgagaagaatgatgttacaattggaagaatgcctatcatg
ttaaggagctgctgctgcgtattatatggaaaagatgaagctgaacttgcaagacttggt
gagtgcccccttgatcctggaggatattttgttatcaaagggacagagaaggtgatgttg
atacaagagcaactatctaagaataggattattattgatagtgacaagaagggaaacatc
aacgcatctgtgacaagcagcactgaggatcggaaaagcaaaacagttatcttgatggaa
aaggggaagatgtatttacacctaaatatgttttcggaaaagattcctattatggtagtc
atgaaggcaatgggaatggagagtgatcaagaagttgtacagatggttggaagagatcct
cgttatagtgctgtacttttgccatccattgaggaatgtgcaaacaagggtatattcacg
aaacagcaggctttggagtatcttgatccaaaggcgaagaggacttatgccagtgcatca
gaaaagggagctttacctgtccttcgagatatgtttcttgcaaatgtaccagtgcgccag
ggtagtttccgtgcgaaatgcatatatgttgctgtaatgttacgacgtgtgatagatgca
tttctgaataaggatacaatggatgacaaggattatgtgggaaataagcggttggagtta
tctggccagttaatttctctactctttgaggatttgttcaagacgatgattgataatgtt
aagaagaagatggacgaaatcatgggaaagcctagcaggtctagccgatttgaccccgcg
ccatatctttgtggagacagtattacaaatggcctggagaggacgctttctacaggtaac
ttcaatgtcaaacggttcaggatggacagaaaaggcatgacacaggtactagctaggtta
tcattcatagcggctatggggcacatgacaagaatctcaccacagtttgagaagtctagg
aaagtcagtggacctcgagctttgcaacctagccagtggggcatgctttgcccatgtgat
actccagaaggtgaagcttgtggtctggtaaaaaacttggccttgatgactcatgttaca
actgatgaagaggagggcccattaatttctttgtgctactatttgggcgttgaagacttg
gaactactatctggagaagagcttcacacaccaaattcctttctagttatatttaatggg
ctgatccttggcaagcatcggaggccacagcattttgctgctaccatgagaaagttacgg
agagctggcaaaattggcgagtttgtaagtgtatatgtcaatgagaagcagtgctgtgtt
tatgttgcttctgatggaggtcgagtttgtcgtccacttgtcattgctgacaagggcatt
tcaaggatcaaagaacatcatatgaaggagttgttggctggagtccgtacgtttgatagt
tttttacaagacgggttgattgagtatcttgatgttaatgaggagaacaatgctttgatt
gctttatacgaaggagaggctacaacagaaacaacacatattgaaattgagcctttcacc
atcctaggtgtttgtgctgggcttattccatttcctcatcacaatcagtcacctagaaat
acttatcagtgtgcaatggggaagcaagctatgggaaatattgcatataaccagttacgt
cggatggacaccctactatacctgctggtgtatcctcaacgacctctgttgacaacaaaa
acaattgagctggttggatacgataagcttggagcggggcaaaatgccactgttgctgtg
atgagctatagtggctatgacatagaggatgcaattgtcatgaacaagtcatctttagat
cgtggatttggccgttgtatcgttatgaaaaggtatagtgctgtgcttcaaaagtacgaa
aatgacacacaggacaggatactcaggcctgatagaaagggctatggtgcaaaacatatg
cggatactggatgatgatgggattgcttcaccaggggaaattattagcccacaagatatc
tatataaataaacagtcccctgctgttacaagggggacaagagtaccaccatcagaatta
ccaaatataggatataagagcagtaaacaaacatttaagggtcccgaaggggagtcttgt
gtagtggatcgagtggctctttataatgataggcataataatttatctatcaaattctta
attcgccatactcgtaggccagaggtcggtgacaaatttagtagcagacatgggcagaaa
ggagtttgtggcaccattatccagcaggaagacttcccattttctgaacgtggcatttgc
cctgatttgattatgaatcctcatgggtttcctagtcgaatgacagtggggaagatgata
gagcttcttgggggtaaagctggagtttcatgtggtaggtttcattatggcagtgccttt
ggggaaccaagcggtcatgcagacacagttgaagctatgagtgaaattcttgtgaacaaa
ggctttagctacaacggcaaagactttctgtattcaggtatcacaggttgcccactgcaa
gcatatattttcatgggtcctatttactatcaaaagttaaaacatatggtcctagataaa
atgcatgctcgagctgatggaccccgtgttctgctaacaagacagcctacagaggggaga
gctcgcaatggaggacttcgtgtaggagaaatggaacgtgattgtttgatagcttatggt
gctagtatgttaatttttgagcgcctaatgatctctagcgatccttttgaggttcaggtc
tgcagaatatgtggtttgttaggatattacaaccatcatctgaaaactggaatctgttca
tcttgtaaaaaaagggacggtatgtctactatgaagcttccatatgcatgcaagctctta
atccaggaactccaatcgatgaatattgttccccgcttaaagctagccgaggcatga
DBGET
integrated database retrieval system
