Quercus suber (cork oak): 112008798
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Entry
112008798 CDS
T05868
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112008798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
qsu03021
]
112008798
Enzymes [BR:
qsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112008798
Transcription machinery [BR:
qsu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
112008798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
112008798
NCBI-ProteinID:
XP_023896905
LinkDB
All DBs
Position
Unknown
AA seq
1241 aa
AA seq
DB search
MSQQKQEKQEDGKPPFVPQYFGIQQPKRNVKPRPTPAPEDLEALRELFRHQIESFDYMAD
AGLSILFDSIKPVQIHDSFSNRTLKISFENPKLFPPMKDRSSSSSSSALSSSKSTFREFL
YPYECRQFKSSYTGALMAEVCFQYDDGPVIRERFNFGQFPIMLKSKHCHLRGADPQKLVS
CKEEPSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTDKAVVIRCERKN
QSSVSVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALVDTTDHEIYVSLTCCYSERDEM
EKGAVGTQLMGERAKIILDEVRDLSLFTRLQCLEHIGEHFQPVMEGLETKSYSDVADSVL
EDYIFVHLDNNYDKFNLLIFMLQKLFSLIDQTSVPDNSDSLQNQEVLLPGHLITIYLKEK
LEDWLRKAKKSLQDEINKKSNINNKGSNSKSKSFDFCSLADVKKILDKNPVKQISSSVEN
LLKTGRLITQTGLDLQQRAGFTVQAERLNFLRFISHFRAVHRGASFAGLRTTTVRKLLPE
SWGFLCPVHTPDGEPCGLLNHMTSNCRITSFFDSQGNIRDFKKIRKTILSVLIAVGMTPS
LPKLVQAGPPEVLSVLLDGRVVGSLPSSMVEKVVGHLRRLKVSANSMIANDLEVGYVPLS
LGGAYPGLYLFTSPARFVRPVRNISIPSEESQNIELIGPFEQVFMEIRCPDGGDGGRRNA
FPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAINFRADQKLYH
LQTPQSPIVRTSSYTKYGIDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCRGQI
YQTETIDLTEQSSRSDHSQKIFRRSNVNKSMHSTIDSDGLPYVGQTIQQNQPYYCTYDEV
TSTTRPYNRKGSEPVVVDYVALDGKNKEHPRKANIRFRHPRNPVIGDKFSSRHGQKGVCS
QLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGYFVDATPFTIP
VKKDNGDSKPKTSSLEETDGKTESKPNSLVEELGEMLKKKGFNYHGVEVLYSGVYGTELT
CEIFIGPVYYQRLRHMVSDKYQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSMLAHG
AAYLLHDRLHTCSDYHIADVCTLCGSILATTSIQQQKQIQKPKKFGGLPPARPPKKVICH
ACQSSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSNAAGA
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacaaaagcaagaaaagcaagaagacgggaagccgccctttgttccccagtat
ttcggaatacagcagccgaagcggaacgtgaagccgaggccgacgccggccccggaggac
ctggaggcgctgcgggagctgttccgccaccaaatcgagtcgttcgactacatggcggac
gcgggtctctcgatcctcttcgacagcatcaagcccgtccagattcacgactccttctcc
aaccgcaccctcaagatctccttcgagaaccccaagctgttccctccgatgaaggaccgg
tcgtcgtcctcgtcgtcctcggctctgtcctcttccaagtccacgttccgcgagttcctg
tacccttacgaatgcaggcagttcaagagctcgtacaccggggcgctgatggcggaggtt
tgctttcagtacgacgacggacctgtcatcagagagcggttcaatttcggacagtttccg
atcatgcttaagtcaaagcattgtcatttgagaggtgctgatccccagaaactggtctct
tgcaaagaagaaccatcagaaatgggtggatacttcatcttgaatggtcttgaaagagtg
gttcgactcttaatattgccaaagcggaattatccaatgagtatggtgcggaattcattt
agtgatcgcagagaaggatatactgataaagcagttgtcataaggtgtgaaagaaaaaat
cagtcttcagtatcagtcaaattgtattaccttcgtaacggaagtgcaagacttggattt
tggatacaagggagggagtacttgcttcctgtaggcgttgttctaaaggctcttgttgac
acgactgatcatgaaatttatgtgagtttgacgtgctgctatagtgagcgagatgagatg
gaaaagggtgctgttggcactcagcttatgggtgaaagggcaaaaattattcttgatgaa
gttcgtgatctgtctcttttcactcgtcttcaatgtctagagcatattggagagcatttc
caacctgttatggagggactggaaaccaaaagttattctgatgttgctgattctgttctt
gaagactacatatttgttcaccttgataacaattatgacaagttcaatctgctcatcttt
atgctgcagaaacttttctcacttatagatcagacatctgttccagacaactcagactcc
ttgcagaatcaggaagtcttactccccggtcatctgattaccatttatctcaaggaaaag
ctagaagattggctgcgcaaggcaaaaaagtctcttcaagatgagatcaataaaaagagc
aacattaacaacaagggcagcaacagcaagagcaaaagttttgatttttgcagcttagct
gatgtcaagaagattttggataaaaatcctgtgaagcaaatcagttcttctgttgaaaac
ttgttaaaaactggaagactgattacacaaacaggtctagatttgcagcagagggcaggc
tttacggttcaggcagaaaggcttaatttcttacgttttatttcgcattttcgtgctgtt
catcgaggggcttcatttgctggacttcgcaccacaactgtgcggaagttgctacctgaa
tcttggggttttctttgccccgtgcacacacctgatggggagccatgtggcttgctgaat
catatgactagcaactgtcgaattacatctttctttgattctcaaggaaatattagagat
tttaagaaaataagaaagactattctcagtgttttgattgccgttggaatgacaccttca
ctgccaaagctagttcaagctggccctcccgaagttctttctgtccttttagatggtcgt
gttgttggttctttaccttcctctatggttgagaaagtcgtgggtcacttacggagatta
aaagtttcagctaattcaatgattgcaaatgatctggaggtaggatatgttccgttgagt
ctaggtggagcataccctggtttgtacttgttcacatctcctgccagatttgttcggcca
gttagaaatatttcaattccttccgaggaaagtcagaatattgaacttattgggccattt
gagcaggtttttatggaaataagatgtcctgatggtggagatggtgggagaagaaatgct
tttcctgcaactcatgaagaaatccacccaactggaatgctcagtgtggttgctaatctt
acaccttggtcagatcataatcaaagcccacgtaatatgtaccagtgtcagatggcaaaa
caaacaatggctttctcttcacaagcaattaactttcgtgcagatcaaaagctataccat
cttcagactcctcaaagtcccattgttcgcacgagttcatatacaaagtatggcattgat
gaatacccatcaggcacaaatgcaattgttgcagtgctagcatatacaggatatgacatg
gaggatgccatgattttaaataagtcatctgtggagcgtgggatgtgtcgtggacaaata
taccagacggaaactattgacttaactgagcagagcagcaggtcagatcattcccagaaa
atatttcgaagaagtaatgttaataagtcaatgcattctacgattgattcagatgggctg
ccatatgttggtcagacaatacaacaaaatcaaccctattactgcacttatgatgaggta
acaagtaccacaagaccctacaaccggaagggttctgagcctgttgttgttgattatgtt
gctcttgatgggaaaaacaaggagcatcctcgaaaggcaaatatacgttttcgacatcct
agaaaccccgtcattggcgataaatttagcagtagacatggtcagaaaggtgtttgctcc
caattgtggccagatattgatatgccattttctggagttacaggaatgcgtccagatttg
ataattaacccacatgcgtttccatcaaggatgacaattgcaatgcttttggagtctgtt
gctgctaagggaggtagcttacatggttattttgtggatgcgacaccatttactatacca
gtcaagaaagataatggagattctaaaccaaaaactagttctctcgaggaaactgatgga
aagaccgaatcaaaacctaattcacttgttgaggagctaggtgaaatgctaaaaaaaaag
gggttcaattaccatggtgtggaggtattatatagtggtgtatatggaacagagctcaca
tgcgagatctttattgggcctgtttattatcagagactccggcacatggtttcagacaaa
tatcaggtccgatcgactggaactattgatcaggtcacccgacagcctatcaaaggacga
aagcgtggtggtggtattcgttttggagaaatggaacgagactccatgcttgcacatggg
gcggcatatttgttgcacgataggctccacacgtgttctgattatcacattgctgacgtg
tgtacactatgcggaagcatcctcgcaacgacatctatccagcaacaaaagcagatacaa
aagccgaagaagtttggggggctacccccggctagaccacccaaaaaggtcatttgccat
gcttgccagtccagtaaagggatggagacagttgctatgccttatgtcttccgatatttg
gctgcagagttggcagctatgaatataaaaatgacccttcagctgagcaatgctgctgga
gcctga
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integrated database retrieval system
