KEGG   Quercus suber (cork oak): 112014134
Entry
112014134         CDS       T05868                                 
Name
(RefSeq) helicase and polymerase-containing protein TEBICHI-like
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
qsu  Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:qsu03400]
    112014134
Enzymes [BR:qsu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     112014134
DNA repair and recombination proteins [BR:qsu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    112014134
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII Helicase_dom4_arc
Other DBs
NCBI-GeneID: 112014134
NCBI-ProteinID: XP_023902285
LinkDB
Position
Unknown
AA seq 1408 aa
MASSSPRARIDQFFASKKRKPVSPGLKSGRSEKDLKGTVEGSPSAKGTLDNYLVTSEDDN
NNAKARDSLSRQDAVKRNLALEINNSSKDEQMRPSSKLQLHSEAVEAAKKEAFREVPVVE
DVSVGGLAKGCSTSAQAVENPELKKFAADFLSLYCGEFQSNVKSGSELEVDDHKRHCSPS
WLDGKDKTSKKRHCNNNQSLFEGEITCSDKKNPEDMQSVLVDKTMGSVFGSSREVADGNG
PIELQAFLKKCSNTPESSVKMKEFCTPGSLMVKACAHETPRSMRGSSVFSSGEAPEDMQS
VLVDKTMGSVFGSSREVADGNGPIELQAFLKKCSNTPESSVKMKEFCTPGSLMVKACAHE
TPRSMRGSSVFSSGEAFWNEAIQLADGLCDPMVGMSAQAAEETNISKSQCKTVSSCNLRN
GICHDKSKETSDKGENRVWHTELITSLGSLGKHTKDLDKEVSPLPVKHLDFSFEDKNLDE
STPHCPAVDGSKCASHRGGEQSECGSVGHKGLETGNTLIRCDKVQTDEEMHEGKEMTSVV
AVTKRKVDLLCPNNDCMTSKPPVIEIKDSNHMTSNSPVNEVKNLNLDHESDGASTPSSFV
PLEDRLDLNRWLPSEVCSIYRKKGISKLYPWQVDCLQVDGVLQRRNLVYCASTSAGKSFV
AEILMLRRVISTGKIALLVLPYVSICAEKAEHLEVLLEPLGKHVRSYYGNQGGGTLPKDT
AVAVCTIEKANSLINRLLEEGRLSEIGIIVIDELHMVGDRNRGYLLELMLTKLRYAAGEG
NSESSSGESSGMSSGKADPAHGLQIVGMSATMPNVAAVADWLQAALYQTDFRPVPLEEYI
KVGNTIYSKKMDIVRTISKASDLGGKDPDHIVELCNEVVQEGHSVLIFCSSRKGCELTAR
HVSKFLKRFSINVRNDESEFLDITSAIDALRRSPTGLDPTLEETLPSGVAYHHAGLTVEE
REIVETCYRRGFLRVLIATSTLAAGVNLPTRRVIFRQPKIGRDFIDGTRYKQMAGRAGRT
GIDTKGESVLICKPEEIKRMMGLLNESCPPLHSCLSVDMNGMTHAILEVVAGGIVQTAND
IHRYVRCTLLNSTKPFEDVVKSAQESLRWLCHKKFLEWNDDTKLYSTTPLGRAAFGSSLC
PEESLIVLDDLSRAREGFVLASDLHLVYLVTPINVDVEPDWELYYERFMQLSALDQSVGN
RVGVVEPFLMRMAHGAPLRISKQSSELLRVCKRFYVALILSRLVQEVPVAEVCEAFKVAR
GMVQALQENAGRFASMVTLFCERLGWHDLEGLVAKFQNRVSFGVRAEIVELTTIPYVKGS
QARTLYKAGLCTPLAIAEASVPEITKTLFESSSWATEGSAQRRVQLGVAKKIKNGARKIV
LDKAEEARVAAFSAFKSLGFNVQHISQL
NT seq 4227 nt   +upstreamnt  +downstreamnt
atggcgtctagttcgccacgggcgcgcatcgatcagttctttgcttcgaagaaacggaaa
cctgtatcacctggtttgaagtctggtagaagtgaaaaagatctgaaaggtaccgtagaa
gggtctccgagtgccaaaggtactctagacaattacttggtgacttcagaggatgacaac
aacaatgcaaaagctcgtgattcgttgtctaggcaagacgcggttaaaagaaatttggcg
ttggagattaataattcttccaaggatgaacaaatgcggccctcttcaaagttacaattg
cactctgaagcagttgaagcggctaagaaggaagcgtttcgagaagtacctgtggtggag
gatgtttcagttggaggccttgcaaagggttgctcaacttctgcacaagctgttgagaac
ccagagctcaaaaagtttgctgctgactttttgtctttgtattgtggtgagtttcaatca
aatgtaaagtcagggtcagagctagaagtggacgaccataagagacattgtagtccttcg
tggctggacgggaaggataagacatccaagaagaggcattgcaacaataatcagtcactt
tttgaaggtgaaatcacttgttccgataagaaaaatcctgaggatatgcagtctgttctt
gttgataaaaccatgggatctgttttcggctcttctagagaggttgctgatggtaatggt
cccattgagcttcaagccttcttgaaaaaatgcagtaacactcctgagtcatctgtaaaa
atgaaagaattctgcacaccgggttcattgatggttaaagcatgtgctcatgaaactccc
aggtcaatgcgtggaagctctgtgttttcatcaggagaagcacctgaggatatgcagtct
gttcttgttgataaaaccatgggatctgttttcggctcttctagagaggttgctgatggt
aatggtcccattgagcttcaagccttcttgaaaaaatgcagtaacactcctgagtcatct
gtaaaaatgaaagaattctgcacaccgggttcattgatggttaaagcatgtgctcatgaa
actcccaggtcaatgcgtggaagctctgtgttttcatcaggagaagcgttttggaatgaa
gcaattcaacttgctgatggtttgtgtgatccaatggttggcatgtctgctcaggctgct
gaagaaactaatatttcaaaaagccaatgtaaaaccgtgagctcgtgcaatttgagaaat
ggaatctgtcatgacaagtcaaaggaaacatcggacaagggtgagaacagagtatggcat
acagaattaattacttctttggggtcattggggaagcatacaaaagatctggataaagaa
gtatccccacttcctgttaagcatcttgacttttcatttgaggacaaaaacctggatgaa
agtaccccgcactgtcctgctgtagatggttcaaaatgtgcttctcatagaggtggtgag
caatctgaatgtggttctgttggtcataaagggctagaaactggaaatacattaattcga
tgtgacaaagttcagacagatgaagagatgcatgagggaaaggagatgacatctgtagtt
gctgtaactaaaaggaaggtggatttattgtgtccaaataatgattgcatgacatctaag
ccacctgttattgaaatcaaggattcaaatcacatgacatctaattcaccagttaatgaa
gtcaaaaatttaaatcttgaccatgaatcggatggagcaagtactccttcaagttttgtg
ccgcttgaagatcgtttagatctaaatcgttggcttccatctgaagtatgcagcatatat
agaaagaaaggaatttcgaaattgtatccttggcaggttgactgccttcaggtggatggt
gtcttacagagaagaaacttagtatattgtgcatctacaagtgctggtaaaagttttgtt
gctgaaattttgatgttgcggcgtgtcatatcaactggaaaaattgcactacttgtactt
ccttatgtatcaatttgtgcagaaaaggctgaacatctggaggtccttcttgaaccactt
ggtaagcatgttcgtagctattatggaaaccaaggtggtggaacacttcctaaagatact
gctgtagctgtctgcacaatagagaaggcaaactctctaataaacagattacttgaagag
ggtcgcttgtcagaaattggaataatcgtgatagatgaactacacatggttggtgatcgg
aataggggttatcttttggaacttatgttgacaaagcttcgttatgcagctggtgaaggc
aattcagaatcaagtagtggagaaagttcaggtatgagcagtggtaaggctgaccctgct
catggtctgcaaattgttgggatgagtgcaaccatgccaaatgtggcagctgttgctgat
tggcttcaagctgcattataccagacagattttcgaccagttccattagaagaatatatt
aaagttggtaacactatttatagcaaaaaaatggatattgttcgaacaatctcaaaagca
tctgaccttggtggtaaagatccagatcatattgttgagctatgtaatgaggttgttcaa
gagggtcattcagtgttaatattttgctctagtcgaaagggatgtgaattaactgcaagg
catgtttcaaagttcctcaaaagattttctattaatgttcgtaatgatgaaagtgagttc
ttggatattacttcagctattgatgccttgcgaaggagtccaacaggactggatcctaca
ttggaagaaactctcccttctggtgttgcctatcaccatgctggcctcacggttgaggag
agagagattgttgaaacctgctaccgcagaggctttttacgtgtcttaattgctacatct
accttagctgctggggttaatttaccaactaggagggtcatttttcggcaacccaagatt
ggtcgtgattttattgatgggacaaggtacaaacagatggctggtcgggctggtcggact
gggatagatacaaagggggaaagtgtactaatatgcaaaccggaagaaataaaaagaatg
atgggacttcttaatgaaagctgtccaccattgcattcttgtctatctgtagatatgaat
ggaatgactcatgccattttagaagttgtggctggtgggattgttcaaactgctaatgat
attcatcgatatgttcggtgtactcttttgaattccaccaagccatttgaagatgtggtg
aaatcagctcaggaatctcttcggtggttgtgccataaaaaatttcttgaatggaatgat
gatactaagttatacagtaccacaccacttggacgagcagcttttggcagttctctttgc
ccagaagaatcacttattgtgctggatgatctttcaagggcaagagaaggatttgtgctt
gcatctgatttgcatttagtttacttggtaacaccaataaacgttgacgttgagccagat
tgggaattgtactatgaacgttttatgcaattatctgctcttgaccagtcagtgggcaat
cgagttggagttgttgagccgtttctgatgcgcatggcacatggtgcacctttgcgcatt
tcaaagcaatcaagtgaactacttcgagtgtgtaaacgtttctatgttgcactcatctta
tcaagattagtgcaggaagttcctgtggctgaggtttgtgaagcttttaaagtggctcga
ggcatggttcaagccttacaagagaatgctggaaggtttgcatcaatggttactttattt
tgtgagaggcttggatggcatgatctggaaggcttggttgccaagttccaaaatcgtgtt
tcatttggagtgagagcagaaattgtagagcttactacaattccatatgttaagggttct
caagcaagaacactctacaaagctggcttgtgtacacctctagcaattgcagaagcatct
gttcctgaaattaccaaaactctttttgaatcttcttcatgggctacagaaggttcagca
caaagacgtgtacaacttggagtggccaagaagattaagaatggtgcacgcaaaattgtt
ctggataaagctgaagaagcaagggttgctgccttctcagctttcaaatcacttggattt
aatgtgcaacacatttctcaactttaa

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