KEGG   Quercus suber (cork oak): 112036272
Entry
112036272         CDS       T05868                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03020  RNA polymerase
qsu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112036272
  09124 Replication and repair
   03420 Nucleotide excision repair
    112036272
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qsu03021]
    112036272
   03019 Messenger RNA biogenesis [BR:qsu03019]
    112036272
   03400 DNA repair and recombination proteins [BR:qsu03400]
    112036272
Transcription machinery [BR:qsu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     112036272
Messenger RNA biogenesis [BR:qsu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112036272
DNA repair and recombination proteins [BR:qsu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      112036272
SSDB
Motif
Pfam: SHS2_Rpb7-N S1 Vg_Tdu
Other DBs
NCBI-GeneID: 112036272
NCBI-ProteinID: XP_023924845
LinkDB
Position
Unknown
AA seq 176 aa
MFFHIVLERNMQLHPRHFGRNLRDNIVAKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR
DGTGFVSFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPAAA
NT seq 531 nt   +upstreamnt  +downstreamnt
atgttcttccacatagtactggagcggaacatgcagctccaccctcgccacttcggccgc
aacctccgtgacaacattgtcgccaagctcatgaaagatgtcgagggcacctgcagtggt
cgacatgggtttgttgtggcaataactggaattgagaatattgggaaagggttgattcgt
gatggaactggatttgtctcctttccagtgaagtaccaatgtgttgttttcagacccttt
aaaggcgagattttagaggctgttgttactatggtcaacaagatgggattttttgccgaa
gctgggcctgttcaaatttttgtttcaaaccatttgataccggatgatatggaattccaa
tctggagatatgccaaattatacaacttcagatggatcagttaagatacaaaaggatagt
gaagtccggctgaagataattggaactcgagttgatgctacagaaattttctgcattggt
accataaaagatgatttcttgggtgtgatcaatgatcctgcagcggcttag

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